*2014/08/05 16:51:48.66 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/03/14 20:36:34.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 97 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1EA9EBAC NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 100 2 Temperature:Secondary 'deg C (ITS90)' 7.3575 8.6579 3 Fluorescence:URU:Wetlabs mg/m^3 0.208 4.511 4 pH:SBE:Nominal n/a 8.693 8.996 5 Salinity:T1:C1 PSS-78 28.3261 30.7788 6 Oxygen:Dissolved:SBE mL/L 3.275 6.647 7 Oxygen:Dissolved:SBE umol/kg 142.8014 290.3387 8 Number_of_bin_records n/a 3 122 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2014-16\Pro $END *ADMINISTRATION MISSION : 2014-16 AGENCY : PBS, Salmon and Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : 'Juan de Fuca Strait, Strait of Georgia, Johnstone' CONTINUED : ' Strait' STATION : GS 28 EVENT NUMBER : 129 LATITUDE : 49 45.22000 N ! (deg min) LONGITUDE : 124 22.20000 W ! (deg min) WATER DEPTH : 112 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2710 Conductivity ' ' 2128 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 2374 Conductivity:2 ' ' 3396 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/07/28 13:36:58 9343 9343 CLEAN 5.1 2014/07/28 15:14:25 9343 9343 SHIFTDAT 3.4 2014/07/28 16:29:48 9343 9343 SHIFTDAT 3.4 2014/07/28 16:53:56 9343 9343 SHIFTDAT 3.4 2014/07/28 17:38:05 9343 9343 DELETE 6.3 2014/07/28 17:47:32 9343 3482 CTDEDIT 5.0.4 2014/07/30 16:56:35 3482 3313 CALIB 11.8 2014/07/31 17:18:55 3313 3313 FILTERS 4.3 2014/07/31 17:22:04 3313 3313 BINAVE 4.1.1 2014/07/31 17:22:52 3313 97 REMOVECH 8.2 2014/07/31 17:31:17 97 97 CHGUNITS 3.1 2014/07/31 17:37:41 97 97 REORDER 1.3 2014/07/31 17:39:04 ? ? HDREDIT2 2.6 2014/08/05 16:51:48 ? ? $END $REMARKS -CLEAN functions: 2014/07/28 15:13:12 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.90 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 30.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 90.30 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/07/30 16:56:35 169 records were deleted in this editing session. 13 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/07/31 17:18:55 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-16\Processing\doc\2014-16-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 0.1200000E-02 0.1000000E+01 14 Oxygen:Dissolved:SBE mL/L 10 0.1420000E-01 0.1050200E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/07/31 17:31:17 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Tem* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/08/05 16:51:48 Applied edit header: P:\Cruise_Data_Processing\2014-16\Processing\doc\2014-16-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2014-16\2014-16-0129.hex Software Version Seasave V 7.22.4 Temperature SN = 2710 Conductivity SN = 2128 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 14 2014 20:36:37 NMEA Latitude = 49 45.22 N NMEA Longitude = 124 22.20 W NMEA UTC (Time) = Mar 14 2014 20:36:34 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2014-16 Station: GS 28 Depth(m): 112 System UTC = Mar 14 2014 20:36:37 # nquan = 15 # nvalues = 9343 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = dz/dtM: Descent Rate [m/s] # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 9343 # span 1 = 0.438, 100.302 # span 2 = 7.3513, 8.6613 # span 3 = 7.3515, 8.6619 # span 4 = 2.976019, 3.281165 # span 5 = 2.975850, 3.281502 # span 6 = 0.1722, 6.6166 # span 7 = 1.2674, 2.0134 # span 8 = 8.679, 9.007 # span 9 = 0, 1 # span 10 = -1.385, 1.422 # span 11 = 28.1779, 30.7791 # span 12 = 28.1743, 30.7808 # span 13 = 3.06900, 6.37946 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 14 2014 20:36:34 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2710 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36715380e-003 # 6.46576903e-004 # 2.33953737e-005 # 2.19507139e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02028018e+001 # 1.46419864e+000 # -3.32636380e-003 # 3.25151678e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 25-Mar-13 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 0.99988778 # -0.12341 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 2374 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34913123e-003 # 6.45506956e-004 # 2.32986392e-005 # 2.17320090e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.92108035e+000 # 1.31524483e+000 # -2.66264865e-004 # 8.33352189e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1176 # 05-Mar-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.2702e-001 # -0.5178 # -3.7667e-003 # 1.4548e-004 # -2.8367e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.7500e-002 # 2.2100 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0185 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Jul 28 2014 09:56:16, 7.22.5 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2014-16\RAW\CTD\2014-16-0129.hex P:\Crui se_Data_Processing\2014-16\Processing\doc\2014-16-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Jul 28 2014 09:57:29, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2014-16\Processing\convert\2014-16-012 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jul 28 2014 11:29:38, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2014-16\Processing\wildedit\2014-16-01 29.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Jul 28 2014 13:30:07, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2014-16\Processing\align\2014-16-0129.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jul 28 2014 13:31:31, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2014-16\Processing\celltm\2014-16-0129.c nv P:\Cruise_Data_Processing\2014-16\Processing\doc\2014-16-ctd.XMLCON # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved oxygen was calibrated using the results of cruise 2014-01 when the same sensor was used. There was no calibration sampling from this cruise. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. The primary CTD salinity channel was used for event #144, so it was recalibrated to match the secondary channel which was selected for all other casts. For details on the processing see the report: 2014-16_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.12E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.142E-01 1.0502) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 7.9002 3.345 8.996 28.3261 6.65 290.3 39 5.0 7.8932 3.423 8.994 28.3360 6.62 289.3 30 6.0 7.8468 3.775 8.993 28.3506 6.58 287.4 3 7.0 7.8335 3.838 8.992 28.3694 6.58 287.6 48 8.0 7.8287 4.221 8.988 28.3803 6.58 287.6 50 9.0 7.8276 4.397 8.985 28.3811 6.52 284.8 57 10.0 7.8211 4.511 8.978 28.4308 6.50 283.9 51 11.0 7.8196 4.396 8.971 28.4586 6.52 284.9 48 12.0 7.8363 4.198 8.971 28.4390 6.52 284.9 46 13.0 7.8195 4.045 8.969 28.4855 6.57 286.8 44 14.0 7.8504 4.032 8.973 28.4094 6.55 286.3 43 15.0 7.8476 4.254 8.976 28.4177 6.46 282.3 41 16.0 7.8177 4.153 8.976 28.5026 6.38 278.6 41 17.0 7.6671 4.068 8.965 29.0206 6.34 276.7 32 18.0 7.5927 3.382 8.952 29.1955 6.30 274.9 32 19.0 7.5464 2.428 8.943 29.2552 6.25 272.8 32 20.0 7.4900 2.116 8.934 29.3523 6.18 269.5 31 21.0 7.4481 1.877 8.927 29.4383 6.08 265.3 30 22.0 7.3970 1.723 8.916 29.5143 6.07 264.9 30 23.0 7.3603 1.584 8.907 29.5876 6.11 266.6 29 24.0 7.3575 1.422 8.904 29.6024 6.18 269.5 31 25.0 7.3575 1.358 8.900 29.6320 6.24 272.1 27 26.0 7.4141 1.411 8.902 29.6994 6.16 268.7 30 27.0 7.4521 1.397 8.905 29.7439 6.06 264.5 29 28.0 7.4348 1.364 8.901 29.7857 6.00 261.6 30 29.0 7.4292 1.280 8.894 29.8015 5.89 256.9 29 30.0 7.4412 1.147 8.886 29.8453 5.80 252.9 29 31.0 7.4588 0.957 8.877 29.8948 5.76 251.2 30 32.0 7.4617 0.851 8.871 29.9065 5.72 249.7 32 33.0 7.4689 0.845 8.869 29.9181 5.75 251.0 31 34.0 7.4735 0.880 8.865 29.9333 5.67 247.3 32 35.0 7.4871 0.877 8.863 29.9495 5.39 235.1 31 36.0 7.5684 0.796 8.854 30.0061 5.15 224.5 30 37.0 7.6727 0.692 8.842 30.0688 5.08 221.7 28 38.0 7.6951 0.639 8.833 30.0812 5.07 221.3 29 39.0 7.7119 0.608 8.826 30.0919 5.04 219.7 31 40.0 7.7263 0.606 8.820 30.1013 4.91 214.3 31 41.0 7.7817 0.602 8.813 30.1356 4.72 206.0 32 42.0 7.8491 0.573 8.807 30.1749 4.55 198.3 31 43.0 7.9275 0.501 8.798 30.2184 4.41 192.1 32 44.0 7.9812 0.469 8.787 30.2467 4.24 184.9 31 45.0 8.0586 0.451 8.776 30.2953 4.16 181.6 30 46.0 8.1104 0.421 8.767 30.3274 4.12 179.6 30 47.0 8.1321 0.407 8.759 30.3419 4.08 177.9 30 48.0 8.1595 0.393 8.752 30.3600 4.04 176.2 31 49.0 8.1880 0.377 8.747 30.3787 4.03 175.6 31 50.0 8.2036 0.347 8.742 30.3891 3.95 172.4 33 51.0 8.2367 0.353 8.738 30.4118 3.85 167.9 33 52.0 8.2885 0.331 8.732 30.4438 3.80 165.6 32 53.0 8.3220 0.310 8.728 30.4677 3.79 165.1 32 54.0 8.3375 0.297 8.724 30.4793 3.78 164.8 30 55.0 8.3486 0.293 8.722 30.4876 3.75 163.4 30 56.0 8.3649 0.300 8.719 30.4994 3.71 161.6 31 57.0 8.3879 0.288 8.720 30.5158 3.65 159.3 30 58.0 8.4219 0.276 8.716 30.5423 3.62 158.0 32 59.0 8.4505 0.271 8.715 30.5660 3.61 157.4 32 60.0 8.4606 0.265 8.714 30.5744 3.60 156.9 31 61.0 8.4726 0.252 8.712 30.5844 3.59 156.4 32 62.0 8.4892 0.260 8.711 30.5981 3.56 155.2 31 63.0 8.5003 0.252 8.709 30.6070 3.55 154.9 31 64.0 8.5113 0.252 8.710 30.6158 3.55 154.7 30 65.0 8.5200 0.240 8.709 30.6225 3.52 153.5 30 66.0 8.5318 0.243 8.709 30.6343 3.49 152.1 32 67.0 8.5480 0.236 8.710 30.6497 3.47 151.3 32 68.0 8.5605 0.236 8.708 30.6603 3.44 150.1 32 69.0 8.5759 0.235 8.707 30.6712 3.42 148.9 31 70.0 8.5891 0.230 8.705 30.6821 3.38 147.6 32 71.0 8.6043 0.222 8.703 30.6937 3.37 147.0 31 72.0 8.6143 0.227 8.701 30.7008 3.37 147.1 28 73.0 8.6120 0.232 8.701 30.7021 3.38 147.2 31 74.0 8.6111 0.226 8.701 30.7020 3.38 147.3 32 75.0 8.6094 0.220 8.699 30.7020 3.37 147.0 31 76.0 8.6088 0.232 8.699 30.7046 3.37 147.0 33 77.0 8.6108 0.225 8.698 30.7082 3.35 146.2 33 78.0 8.6172 0.222 8.700 30.7144 3.35 146.1 33 79.0 8.6202 0.229 8.698 30.7194 3.35 146.2 32 80.0 8.6144 0.223 8.697 30.7204 3.35 146.0 31 81.0 8.6166 0.230 8.697 30.7233 3.32 144.9 32 82.0 8.6302 0.225 8.697 30.7306 3.31 144.1 33 83.0 8.6426 0.213 8.696 30.7362 3.31 144.2 34 84.0 8.6453 0.221 8.695 30.7374 3.29 143.6 33 85.0 8.6458 0.231 8.694 30.7381 3.30 143.8 32 86.0 8.6494 0.225 8.694 30.7403 3.29 143.7 29 87.0 8.6505 0.213 8.694 30.7405 3.28 143.1 32 88.0 8.6523 0.220 8.694 30.7409 3.27 142.8 32 89.0 8.6579 0.212 8.694 30.7423 3.28 142.9 32 90.0 8.6568 0.215 8.694 30.7489 3.28 143.1 32 91.0 8.6512 0.213 8.693 30.7527 3.31 144.2 33 92.0 8.6407 0.220 8.694 30.7532 3.33 145.0 30 93.0 8.6378 0.219 8.694 30.7574 3.31 144.5 35 94.0 8.6390 0.214 8.694 30.7589 3.31 144.4 34 95.0 8.6391 0.209 8.694 30.7614 3.30 143.8 36 96.0 8.6308 0.208 8.695 30.7640 3.32 144.9 27 97.0 8.6216 0.209 8.695 30.7684 3.36 146.4 35 98.0 8.6160 0.212 8.698 30.7742 3.36 146.3 33 99.0 8.6120 0.208 8.699 30.7758 3.35 146.3 122 100.0 8.6014 0.218 8.700 30.7788 3.37 147.0 52