*2014/05/20 14:40:58.20 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/10/22 14:13:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 284AF328 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 101 2 Temperature:Secondary 'deg C (ITS90)' 8.3941 11.5222 3 Fluorescence:URU:Wetlabs mg/m^3 0.159 1.141 4 pH:SBE:Nominal n/a 8.866 9.045 5 Salinity:T1:C1 PSS-78 30.903 33.1139 6 Oxygen:Dissolved:SBE mL/L 2.358 4.055 7 Oxygen:Dissolved:SBE umol/kg 102.6269 176.8707 8 Number_of_bin_records n/a 5 26 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-65\Pro $END *ADMINISTRATION MISSION : 2013-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Coast of Vancouver Island STATION : IVI 3 EVENT NUMBER : 121 LATITUDE : 50 29.65000 N ! (deg min) LONGITUDE : 127 45.12000 W ! (deg min) WATER DEPTH : 110 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2038 Conductivity ' ' 1763 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 4883 Conductivity:2 ' ' 3394 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/05/08 17:06:17 5798 5798 CLEAN 5.1 2014/05/08 17:09:12 5798 5798 SHIFTDAT 3.4 2014/05/09 14:40:58 5798 5798 SHIFTDAT 3.4 2014/05/09 15:25:39 5798 5798 SHIFTDAT 3.4 2014/05/09 15:27:49 5798 5798 DELETE 6.3 2014/05/09 15:33:11 5798 2388 CTDEDIT 5.1 2014/05/13 14:30:18 2388 2277 CALIB 11.8 2014/05/14 16:13:18 2277 2277 FILTERS 4.3 2014/05/14 16:17:56 2277 2277 BINAVE 4.1.1 2014/05/14 16:19:42 2277 98 REMOVECH 8.2 2014/05/14 16:20:22 98 98 CHGUNITS 3.1 2014/05/14 16:24:14 98 98 REORDER 1.3 2014/05/14 17:02:38 ? ? HDREDIT2 2.6 2014/05/20 14:40:58 ? ? $END $REMARKS -CLEAN functions: 2014/05/08 17:08:11 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.20 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 75.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 91.54 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.1 2014/05/13 14:30:18 111 records were deleted in this editing session. 12 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/05/14 16:13:18 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/05/14 16:20:22 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperatur* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/20 14:40:58 Applied edit header: P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-65\2013-65-121.hex Software Version Seasave V 7.22.4 Temperature SN = 2038 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 22 2013 15:13:05 NMEA Latitude = 50 29.65 N NMEA Longitude = 127 45.12 W NMEA UTC (Time) = Oct 22 2013 14:13:02 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-65 Station: ivi 3 Depth(m): 110 System UTC = Oct 22 2013 14:13:05 # nquan = 15 # nvalues = 5798 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 13 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 5798 # span 1 = 2.457, 101.540 # span 2 = 8.3943, 11.5221 # span 3 = 8.3937, 11.5230 # span 4 = 3.484740, 3.586853 # span 5 = 3.484545, 3.586680 # span 6 = 0.0631, 2.8885 # span 7 = 1.2735, 1.9060 # span 8 = 8.854, 9.053 # span 9 = 0, 1 # span 10 = 30.9011, 33.1165 # span 11 = 30.8987, 33.1159 # span 12 = 2.32580, 4.08222 # span 13 = -2.443, 1.766 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 22 2013 14:13:02 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2038 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34114478e-003 # 6.27604357e-004 # 1.92175718e-005 # 1.36370000e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1763 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.22314873e+000 # 5.07768024e-001 # -5.15940128e-004 # 5.09668877e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 30-Dec-13 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 4883 # 01-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38017391e-003 # 6.40020208e-004 # 2.12586690e-005 # 1.76262755e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3394 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.62060268e+000 # 1.47483016e+000 # -1.36190582e-003 # 1.93968125e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 03-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.7181e-001 # -0.5187 # -2.2511e-003 # 1.3917e-004 # -2.6436e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.4300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = May 08 2014 16:35:15, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-65\RAW\CTD\2013-65-0121.hex P:\Crui se_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = May 08 2014 16:37:37, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-65\Processing\convert\2013-65-012 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = May 08 2014 16:38:49, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-65\Processing\wildedit\2013-65-01 21.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = May 08 2014 17:00:12, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-65\Processing\align\2013-65-0121.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = May 08 2014 17:03:28, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-65\Processing\celltm\2013-65-0121.c nv P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface records and a few records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- The Fluorescence:URU:Wetlabs data are nominal and unedited except that some records were removed in editing temperature and salinity. The only calibration sampling was from about 10m, so recalibration could not be based on that information. Since there were post-cruise calibrations available, those parameters were used in processing the pressure, temperature, conductivity and dissolved oxygen sensor data. The factory calibrations of the temperature and conductivity sensors in January 2014 imply that there was no significant drift in secondary salinity since the previous factory service. No recalibration was applied to the secondary salinity. For events #7 and 16 the primary salinity was used: that channel was recalibrated based on how it compared with the secondary salinity. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. The data are unedited except that some records were removed in editing temperature and salinity. For details on the processing see processing report: 2013-65-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 11.5125 1.099 9.044 30.9030 4.05 176.9 18 5.0 11.5178 1.141 9.044 30.9043 4.04 176.3 11 6.0 11.5171 1.080 9.045 30.9046 4.01 175.0 15 7.0 11.5177 1.092 9.045 30.9050 3.94 172.1 23 8.0 11.5222 1.097 9.042 30.9116 3.88 169.0 26 9.0 11.5206 1.044 9.040 30.9281 3.83 167.0 26 10.0 11.5149 0.935 9.038 30.9709 3.79 165.3 25 11.0 11.5142 0.891 9.034 30.9982 3.74 163.1 25 12.0 11.5102 0.819 9.032 31.0103 3.71 161.7 24 13.0 11.4939 0.695 9.029 31.0322 3.69 161.0 25 14.0 11.4838 0.683 9.026 31.0436 3.72 162.1 25 15.0 11.4766 0.589 9.024 31.0484 3.76 163.9 24 16.0 11.4702 0.550 9.026 31.0578 3.75 163.6 23 17.0 11.4762 0.489 9.029 31.1259 3.74 163.1 21 18.0 11.4874 0.471 9.030 31.1520 3.73 162.4 19 19.0 11.4695 0.446 9.031 31.1843 3.67 160.1 20 20.0 11.4557 0.430 9.032 31.2206 3.65 159.1 21 21.0 11.4338 0.441 9.030 31.2556 3.65 159.3 21 22.0 11.3910 0.433 9.028 31.3008 3.63 158.5 21 23.0 11.3361 0.388 9.028 31.3778 3.61 157.5 23 24.0 11.2399 0.350 9.027 31.5224 3.62 157.6 22 25.0 11.1874 0.340 9.026 31.6068 3.60 156.8 23 26.0 11.1265 0.310 9.025 31.7001 3.60 156.9 22 27.0 11.0848 0.270 9.024 31.7578 3.62 158.0 23 28.0 11.0642 0.279 9.024 31.7793 3.68 160.2 23 29.0 11.0506 0.257 9.027 31.7893 3.65 159.2 23 30.0 11.0281 0.292 9.030 31.8053 3.56 155.1 23 31.0 11.0046 0.301 9.028 31.8236 3.45 150.2 25 32.0 10.8770 0.289 9.022 31.9152 3.40 148.2 23 33.0 10.6425 0.277 9.012 32.0664 3.39 147.7 23 34.0 10.5183 0.255 9.005 32.1379 3.37 146.7 23 35.0 10.4639 0.250 9.002 32.1599 3.31 144.4 22 36.0 10.4367 0.234 8.997 32.1685 3.26 141.9 23 37.0 10.4028 0.253 8.993 32.1817 3.23 140.7 24 38.0 10.3268 0.232 8.988 32.2227 3.20 139.4 22 39.0 10.1899 0.225 8.984 32.3007 3.15 137.4 23 40.0 10.1249 0.225 8.979 32.3393 3.10 135.0 23 41.0 10.0961 0.226 8.973 32.3538 3.02 131.5 22 42.0 10.0345 0.218 8.967 32.3863 2.92 127.2 22 43.0 9.8650 0.206 8.957 32.4724 2.82 122.8 23 44.0 9.7461 0.205 8.947 32.5383 2.79 121.3 23 45.0 9.6854 0.191 8.938 32.6056 2.76 120.4 23 46.0 9.6014 0.175 8.933 32.6519 2.71 118.1 22 47.0 9.5750 0.174 8.927 32.6601 2.63 114.6 22 48.0 9.5208 0.195 8.922 32.6767 2.58 112.2 22 49.0 9.4209 0.177 8.915 32.7358 2.57 112.0 23 50.0 9.3723 0.167 8.909 32.7692 2.57 111.8 24 51.0 9.3464 0.179 8.905 32.7786 2.57 111.7 24 52.0 9.3395 0.202 8.903 32.7810 2.58 112.1 25 53.0 9.3327 0.167 8.901 32.7840 2.56 111.4 24 54.0 9.2979 0.167 8.901 32.7909 2.57 111.9 24 55.0 9.2792 0.175 8.901 32.8012 2.60 113.2 24 56.0 9.2556 0.179 8.902 32.8094 2.62 114.2 24 57.0 9.2208 0.177 8.903 32.8067 2.62 113.9 25 58.0 9.1641 0.185 8.904 32.8149 2.59 112.7 24 59.0 9.0840 0.166 8.905 32.8395 2.57 112.0 25 60.0 9.0068 0.180 8.903 32.8719 2.56 111.5 25 61.0 8.9759 0.172 8.902 32.8862 2.57 111.8 23 62.0 8.9397 0.177 8.899 32.8985 2.56 111.5 26 63.0 8.9177 0.171 8.899 32.9051 2.56 111.3 24 64.0 8.8726 0.178 8.897 32.9194 2.54 110.7 23 65.0 8.8489 0.169 8.895 32.9291 2.54 110.5 25 66.0 8.8383 0.185 8.895 32.9341 2.52 109.9 24 67.0 8.8295 0.177 8.894 32.9395 2.51 109.2 24 68.0 8.8165 0.183 8.892 32.9474 2.51 109.1 24 69.0 8.8039 0.161 8.891 32.9541 2.51 109.1 24 70.0 8.7609 0.183 8.889 32.9698 2.50 108.6 22 71.0 8.7496 0.176 8.889 32.9739 2.50 108.9 24 72.0 8.7496 0.171 8.888 32.9743 2.50 108.7 23 73.0 8.7414 0.183 8.888 32.9772 2.49 108.4 24 74.0 8.7308 0.170 8.887 32.9826 2.49 108.2 23 75.0 8.7264 0.174 8.886 32.9850 2.49 108.4 24 76.0 8.7260 0.190 8.886 32.9856 2.48 108.0 24 77.0 8.7250 0.171 8.886 32.9863 2.48 107.9 24 78.0 8.7134 0.183 8.887 32.9908 2.48 107.9 24 79.0 8.6969 0.170 8.886 32.9969 2.47 107.6 26 80.0 8.6958 0.169 8.885 32.9974 2.46 107.1 25 81.0 8.6820 0.179 8.884 33.0030 2.45 106.6 24 82.0 8.6544 0.159 8.882 33.0131 2.43 105.9 26 83.0 8.6212 0.181 8.881 33.0254 2.42 105.4 24 84.0 8.5638 0.171 8.881 33.0472 2.43 105.6 24 85.0 8.5416 0.182 8.879 33.0557 2.41 105.1 24 86.0 8.5266 0.170 8.877 33.0617 2.42 105.2 24 87.0 8.4978 0.181 8.877 33.0726 2.41 104.9 25 88.0 8.4906 0.177 8.876 33.0753 2.41 104.8 25 89.0 8.4802 0.167 8.875 33.0792 2.41 104.9 24 90.0 8.4820 0.171 8.873 33.0789 2.41 104.8 24 91.0 8.4706 0.177 8.873 33.0831 2.40 104.6 18 92.0 8.4585 0.188 8.873 33.0875 2.40 104.5 24 93.0 8.4577 0.167 8.872 33.0879 2.39 104.1 25 94.0 8.4476 0.162 8.873 33.0921 2.38 103.8 25 95.0 8.4394 0.167 8.871 33.0956 2.37 103.3 24 96.0 8.4302 0.181 8.870 33.0993 2.38 103.6 25 97.0 8.4210 0.171 8.869 33.1030 2.37 102.9 25 98.0 8.4161 0.163 8.868 33.1052 2.36 102.8 24 99.0 8.4077 0.163 8.868 33.1084 2.37 103.0 25 100.0 8.3960 0.181 8.867 33.1133 2.36 102.6 26 101.0 8.3941 0.187 8.866 33.1139 2.37 102.9 5