*2014/05/20 14:40:57.34 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/10/19 16:35:24.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 102 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : EA3F6B3F NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 105 2 Temperature:Secondary 'deg C (ITS90)' 7.142 13.0654 3 Fluorescence:URU:Wetlabs mg/m^3 0.148 9.203 4 pH:SBE:Nominal n/a 8.741 9.454 5 Salinity:T1:C1 PSS-78 30.2716 33.7416 6 Oxygen:Dissolved:SBE mL/L 1.461 7.019 7 Oxygen:Dissolved:SBE umol/kg 63.546 306.3524 8 Number_of_bin_records n/a 2 35 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-65\Pro $END *ADMINISTRATION MISSION : 2013-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Coast of Vancouver Island STATION : EP 03 EVENT NUMBER : 67 LATITUDE : 49 16.72000 N ! (deg min) LONGITUDE : 126 41.50000 W ! (deg min) WATER DEPTH : 113 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2038 Conductivity ' ' 1763 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 4883 Conductivity:2 ' ' 3394 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/05/08 17:05:46 6263 6263 CLEAN 5.1 2014/05/08 17:08:43 6263 6263 SHIFTDAT 3.4 2014/05/09 14:40:30 6263 6263 SHIFTDAT 3.4 2014/05/09 15:25:10 6263 6263 SHIFTDAT 3.4 2014/05/09 15:27:19 6263 6263 DELETE 6.3 2014/05/09 15:32:50 6263 2440 CTDEDIT 5.1 2014/05/13 10:21:56 2440 2340 CALIB 11.8 2014/05/14 16:13:06 2340 2340 FILTERS 4.3 2014/05/14 16:17:44 2340 2340 BINAVE 4.1.1 2014/05/14 16:19:36 2340 102 REMOVECH 8.2 2014/05/14 16:20:21 102 102 CHGUNITS 3.1 2014/05/14 16:24:14 102 102 REORDER 1.3 2014/05/14 17:02:38 ? ? HDREDIT2 2.6 2014/05/20 14:40:57 ? ? $END $REMARKS -CLEAN functions: 2014/05/08 17:08:11 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.20 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 75.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 95.81 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.1 2014/05/13 10:21:56 100 records were deleted in this editing session. 20 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/05/14 16:13:06 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/05/14 16:20:21 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperatur* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/20 14:40:57 Applied edit header: P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-65\2013-65-067.hex Software Version Seasave V 7.22.4 Temperature SN = 2038 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 19 2013 17:36:46 NMEA Latitude = 49 16.72 N NMEA Longitude = 126 41.50 W NMEA UTC (Time) = Oct 19 2013 16:35:24 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-65 Station: EP 03 Depth(m): 113 System UTC = Oct 19 2013 16:36:46 # nquan = 15 # nvalues = 6263 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 13 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 6263 # span 1 = 2.637, 105.812 # span 2 = 7.1411, 13.0702 # span 3 = 7.1417, 13.0724 # span 4 = 3.429610, 3.686841 # span 5 = 3.429502, 3.686849 # span 6 = 0.0631, 14.0949 # span 7 = 0.9707, 3.0696 # span 8 = 8.727, 9.510 # span 9 = 0, 1 # span 10 = 30.2710, 33.7445 # span 11 = 30.2684, 33.7427 # span 12 = 1.42520, 7.26737 # span 13 = -2.189, 1.774 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 19 2013 16:35:24 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2038 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34114478e-003 # 6.27604357e-004 # 1.92175718e-005 # 1.36370000e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1763 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.22314873e+000 # 5.07768024e-001 # -5.15940128e-004 # 5.09668877e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 30-Dec-13 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 4883 # 01-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38017391e-003 # 6.40020208e-004 # 2.12586690e-005 # 1.76262755e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3394 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.62060268e+000 # 1.47483016e+000 # -1.36190582e-003 # 1.93968125e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 03-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.7181e-001 # -0.5187 # -2.2511e-003 # 1.3917e-004 # -2.6436e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.4300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = May 08 2014 16:34:59, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-65\RAW\CTD\2013-65-0067.hex P:\Crui se_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = May 08 2014 16:37:30, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-65\Processing\convert\2013-65-006 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = May 08 2014 16:38:43, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-65\Processing\wildedit\2013-65-00 67.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = May 08 2014 17:00:05, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-65\Processing\align\2013-65-0067.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = May 08 2014 17:03:18, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-65\Processing\celltm\2013-65-0067.c nv P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface records; salinity was cleaned. Data Processing Notes: ---------------------- The Fluorescence:URU:Wetlabs data are nominal and unedited except that some records were removed in editing temperature and salinity. The only calibration sampling was from about 10m, so recalibration could not be based on that information. Since there were post-cruise calibrations available, those parameters were used in processing the pressure, temperature, conductivity and dissolved oxygen sensor data. The factory calibrations of the temperature and conductivity sensors in January 2014 imply that there was no significant drift in secondary salinity since the previous factory service. No recalibration was applied to the secondary salinity. For events #7 and 16 the primary salinity was used: that channel was recalibrated based on how it compared with the secondary salinity. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. The data are unedited except that some records were removed in editing temperature and salinity. For details on the processing see processing report: 2013-65-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 13.0654 5.587 9.454 30.2716 6.98 304.6 2 5.0 12.9236 6.247 9.434 30.3853 7.02 306.4 28 6.0 12.8104 4.404 9.422 30.4714 6.98 304.8 29 7.0 12.8261 4.826 9.412 30.4899 6.94 303.0 33 8.0 12.8500 6.372 9.414 30.5248 6.93 302.3 31 9.0 12.9499 6.365 9.421 30.7887 6.80 296.6 20 10.0 12.9672 4.249 9.413 30.8921 6.58 286.9 21 11.0 12.9750 4.155 9.395 30.9282 6.38 278.3 19 12.0 12.9784 5.275 9.376 30.9483 6.15 268.3 21 13.0 12.9444 8.494 9.359 31.0314 5.91 257.9 19 14.0 12.9060 9.203 9.335 31.0906 5.78 252.1 20 15.0 12.8739 7.185 9.315 31.1588 5.74 250.5 21 16.0 12.7841 4.800 9.299 31.2705 5.72 249.4 28 17.0 12.6500 2.992 9.292 31.3632 5.62 245.2 35 18.0 12.6132 2.904 9.275 31.3853 5.49 239.4 29 19.0 12.5861 2.893 9.262 31.4017 5.42 236.3 21 20.0 12.3473 2.408 9.255 31.5535 5.37 234.1 20 21.0 12.2288 1.876 9.247 31.6184 5.33 232.2 20 22.0 12.1543 1.987 9.243 31.6588 5.30 231.1 18 23.0 12.1095 1.649 9.240 31.6860 5.29 230.8 17 24.0 11.9454 1.501 9.236 31.7652 5.28 230.0 19 25.0 11.7921 1.399 9.231 31.8275 5.23 227.8 24 26.0 11.5637 1.328 9.223 31.9097 5.23 227.8 29 27.0 11.3148 1.138 9.219 31.9900 5.24 228.4 26 28.0 11.0592 1.040 9.215 32.0645 5.26 229.1 21 29.0 10.8437 0.948 9.213 32.1101 5.29 230.6 22 30.0 10.6522 0.792 9.208 32.1511 5.28 230.2 24 31.0 10.4513 0.773 9.208 32.1830 5.28 229.8 24 32.0 10.2696 0.781 9.209 32.2170 5.26 229.1 23 33.0 10.2566 0.773 9.207 32.2179 5.25 228.8 22 34.0 10.1356 0.764 9.202 32.2345 5.23 228.0 21 35.0 9.9548 0.772 9.194 32.2594 5.21 227.1 19 36.0 9.6403 0.694 9.187 32.3025 5.17 225.4 22 37.0 9.3889 0.644 9.184 32.3488 5.24 228.2 22 38.0 9.2208 0.654 9.188 32.3845 5.35 233.0 24 39.0 9.1115 0.629 9.184 32.4043 5.20 226.3 24 40.0 8.8289 0.590 9.164 32.4228 4.99 217.1 23 41.0 8.6256 0.544 9.149 32.4713 4.98 216.9 29 42.0 8.6323 0.492 9.137 32.5394 4.79 208.7 26 43.0 8.5594 0.460 9.115 32.5486 4.47 194.9 21 44.0 8.4784 0.418 9.092 32.5506 4.07 177.1 17 45.0 8.5250 0.418 9.066 32.5998 3.81 166.0 16 46.0 8.5273 0.397 9.042 32.6463 3.71 161.4 19 47.0 8.5617 0.327 9.022 32.7395 3.64 158.5 22 48.0 8.6678 0.268 9.000 32.7962 3.39 147.5 28 49.0 8.6784 0.265 8.970 32.8082 3.14 136.7 30 50.0 8.7256 0.267 8.950 32.8693 3.04 132.3 27 51.0 8.7292 0.235 8.939 32.9295 3.00 130.5 24 52.0 8.6545 0.219 8.929 32.9613 2.97 129.3 23 53.0 8.5527 0.237 8.923 32.9899 2.94 127.8 25 54.0 8.4773 0.213 8.916 33.0024 2.90 126.0 24 55.0 8.4378 0.200 8.912 33.0175 2.87 125.1 20 56.0 8.3487 0.193 8.909 33.0417 2.85 124.2 17 57.0 8.3271 0.175 8.909 33.0600 2.85 124.2 15 58.0 8.3059 0.198 8.906 33.0714 2.83 123.0 16 59.0 8.2472 0.185 8.904 33.0950 2.81 122.2 19 60.0 8.1651 0.183 8.897 33.1129 2.71 117.9 30 61.0 8.1343 0.187 8.880 33.1265 2.50 108.8 35 62.0 8.0980 0.186 8.860 33.1457 2.32 100.9 24 63.0 8.0358 0.179 8.847 33.1745 2.23 97.2 21 64.0 7.9622 0.175 8.838 33.2302 2.18 95.0 21 65.0 7.8707 0.176 8.833 33.2793 2.25 98.1 27 66.0 7.8163 0.167 8.834 33.3092 2.26 98.3 28 67.0 7.7344 0.181 8.832 33.3425 2.25 97.8 22 68.0 7.6073 0.152 8.833 33.3919 2.27 98.7 17 69.0 7.5813 0.175 8.832 33.4166 2.29 99.5 17 70.0 7.5532 0.205 8.835 33.4354 2.30 100.1 17 71.0 7.5006 0.157 8.836 33.4650 2.30 100.1 18 72.0 7.4828 0.163 8.836 33.4753 2.27 98.6 24 73.0 7.4740 0.172 8.834 33.4806 2.20 95.6 30 74.0 7.4590 0.158 8.828 33.4905 2.12 92.3 30 75.0 7.4415 0.171 8.819 33.5039 2.04 88.8 26 76.0 7.4191 0.168 8.812 33.5182 2.01 87.4 24 77.0 7.3899 0.167 8.808 33.5344 2.00 86.9 24 78.0 7.3577 0.154 8.805 33.5566 1.98 85.9 23 79.0 7.3495 0.164 8.802 33.5619 1.94 84.5 21 80.0 7.3398 0.153 8.799 33.5677 1.85 80.7 20 81.0 7.3288 0.158 8.794 33.5758 1.78 77.6 17 82.0 7.3199 0.155 8.788 33.5836 1.70 74.0 17 83.0 7.2877 0.184 8.783 33.6073 1.66 72.0 17 84.0 7.2285 0.179 8.774 33.6547 1.63 70.9 22 85.0 7.1909 0.174 8.769 33.6842 1.62 70.4 31 86.0 7.1823 0.166 8.764 33.6914 1.59 69.4 33 87.0 7.1774 0.166 8.761 33.6967 1.57 68.3 26 88.0 7.1720 0.168 8.757 33.7013 1.55 67.4 25 89.0 7.1678 0.184 8.754 33.7047 1.52 66.3 24 90.0 7.1619 0.180 8.753 33.7091 1.53 66.5 23 91.0 7.1562 0.148 8.750 33.7136 1.50 65.5 20 92.0 7.1537 0.187 8.749 33.7153 1.51 65.5 18 93.0 7.1532 0.150 8.748 33.7158 1.50 65.2 19 94.0 7.1528 0.169 8.746 33.7163 1.49 64.6 21 95.0 7.1508 0.161 8.745 33.7182 1.48 64.2 24 96.0 7.1488 0.189 8.743 33.7202 1.47 63.9 25 97.0 7.1476 0.195 8.741 33.7217 1.48 64.2 24 98.0 7.1470 0.195 8.742 33.7226 1.46 63.6 22 99.0 7.1464 0.185 8.741 33.7238 1.46 63.5 24 100.0 7.1456 0.189 8.741 33.7261 1.47 63.9 26 101.0 7.1435 0.196 8.741 33.7314 1.48 64.4 23 102.0 7.1421 0.190 8.742 33.7364 1.47 64.0 21 103.0 7.1420 0.185 8.742 33.7393 1.47 64.1 22 104.0 7.1421 0.181 8.742 33.7409 1.47 63.8 26 105.0 7.1425 0.179 8.742 33.7416 1.48 64.3 24