*2014/05/20 14:40:56.89 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/10/18 17:37:11.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 88 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9EA6BACF NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 91 2 Temperature:Secondary 'deg C (ITS90)' 7.6873 12.8642 3 Fluorescence:URU:Wetlabs mg/m^3 0.174 7.173 4 pH:SBE:Nominal n/a 8.878 9.377 5 Salinity:T1:C1 PSS-78 30.7732 33.3322 6 Oxygen:Dissolved:SBE mL/L 2.54 6.39 7 Oxygen:Dissolved:SBE umol/kg 110.5189 278.8139 8 Number_of_bin_records n/a 5 32 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-65\Pro $END *ADMINISTRATION MISSION : 2013-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Coast of Vancouver Island STATION : VI 08 EVENT NUMBER : 46 LATITUDE : 48 59.32000 N ! (deg min) LONGITUDE : 126 12.89000 W ! (deg min) WATER DEPTH : 98 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2038 Conductivity ' ' 1763 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 4883 Conductivity:2 ' ' 3394 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/05/08 17:05:35 5952 5952 CLEAN 5.1 2014/05/08 17:08:32 5952 5952 SHIFTDAT 3.4 2014/05/09 14:40:20 5952 5952 SHIFTDAT 3.4 2014/05/09 15:24:59 5952 5952 SHIFTDAT 3.4 2014/05/09 15:27:09 5952 5952 DELETE 6.3 2014/05/09 15:32:42 5952 2123 CTDEDIT 5.0.4 2014/05/12 16:06:56 2123 2090 CALIB 11.8 2014/05/14 16:13:01 2090 2090 FILTERS 4.3 2014/05/14 16:17:40 2090 2090 BINAVE 4.1.1 2014/05/14 16:19:33 2090 88 REMOVECH 8.2 2014/05/14 16:20:21 88 88 CHGUNITS 3.1 2014/05/14 16:24:13 88 88 REORDER 1.3 2014/05/14 17:02:37 ? ? HDREDIT2 2.6 2014/05/20 14:40:56 ? ? $END $REMARKS -CLEAN functions: 2014/05/08 17:08:11 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.20 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 75.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 81.43 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/05/12 16:06:56 33 records were deleted in this editing session. 16 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/05/14 16:13:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/05/14 16:20:21 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperatur* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/20 14:40:56 Applied edit header: P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-65\2013-65-046.hex Software Version Seasave V 7.22.4 Temperature SN = 2038 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 18 2013 18:37:34 NMEA Latitude = 48 59.32 N NMEA Longitude = 126 12.89 W NMEA UTC (Time) = Oct 18 2013 17:37:11 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-65 Station: VI 08 Depth(m): 98 System UTC = Oct 18 2013 17:37:34 # nquan = 15 # nvalues = 5952 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 13 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 5952 # span 1 = 2.549, 91.435 # span 2 = 7.6857, 12.8644 # span 3 = 7.6865, 12.8648 # span 4 = 3.436962, 3.639016 # span 5 = 3.436818, 3.638948 # span 6 = 0.0790, 21.9838 # span 7 = 1.3223, 2.8242 # span 8 = 8.863, 9.389 # span 9 = 0, 1 # span 10 = 30.7396, 33.3357 # span 11 = 30.7452, 33.3338 # span 12 = 2.51068, 6.58246 # span 13 = -1.813, 2.208 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 18 2013 17:37:11 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2038 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34114478e-003 # 6.27604357e-004 # 1.92175718e-005 # 1.36370000e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1763 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.22314873e+000 # 5.07768024e-001 # -5.15940128e-004 # 5.09668877e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 30-Dec-13 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 4883 # 01-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38017391e-003 # 6.40020208e-004 # 2.12586690e-005 # 1.76262755e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3394 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.62060268e+000 # 1.47483016e+000 # -1.36190582e-003 # 1.93968125e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 03-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.7181e-001 # -0.5187 # -2.2511e-003 # 1.3917e-004 # -2.6436e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.4300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = May 08 2014 16:34:53, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-65\RAW\CTD\2013-65-0046.hex P:\Crui se_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = May 08 2014 16:37:26, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-65\Processing\convert\2013-65-004 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = May 08 2014 16:38:40, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-65\Processing\wildedit\2013-65-00 46.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = May 08 2014 17:00:03, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-65\Processing\align\2013-65-0046.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = May 08 2014 17:03:13, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-65\Processing\celltm\2013-65-0046.c nv P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove surface records; salinity was cleaned. Data Processing Notes: ---------------------- The Fluorescence:URU:Wetlabs data are nominal and unedited except that some records were removed in editing temperature and salinity. The only calibration sampling was from about 10m, so recalibration could not be based on that information. Since there were post-cruise calibrations available, those parameters were used in processing the pressure, temperature, conductivity and dissolved oxygen sensor data. The factory calibrations of the temperature and conductivity sensors in January 2014 imply that there was no significant drift in secondary salinity since the previous factory service. No recalibration was applied to the secondary salinity. For events #7 and 16 the primary salinity was used: that channel was recalibrated based on how it compared with the secondary salinity. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. The data are unedited except that some records were removed in editing temperature and salinity. For details on the processing see processing report: 2013-65-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 12.8637 5.851 9.377 30.7737 6.39 278.8 15 5.0 12.8642 5.716 9.374 30.7732 6.13 267.5 22 6.0 12.8543 6.060 9.358 30.7799 5.79 252.5 16 7.0 12.8177 6.432 9.319 30.7974 5.53 241.5 18 8.0 12.7775 7.173 9.272 30.8221 5.40 235.8 16 9.0 12.5779 6.556 9.233 30.9330 5.33 232.7 14 10.0 11.9347 4.300 9.201 31.1751 5.35 233.2 18 11.0 11.7137 2.720 9.176 31.2384 5.30 231.1 19 12.0 11.5115 2.009 9.154 31.3024 5.24 228.7 21 13.0 11.3211 1.839 9.139 31.3563 5.20 226.9 20 14.0 11.1397 1.894 9.126 31.4119 5.19 226.4 25 15.0 10.9869 1.867 9.114 31.4613 5.20 226.7 28 16.0 10.8902 1.587 9.108 31.5035 5.14 224.2 23 17.0 10.8640 1.424 9.098 31.5217 4.83 210.6 25 18.0 10.8570 1.408 9.084 31.5330 4.46 194.3 24 19.0 10.8981 1.501 9.076 31.5810 4.22 184.0 23 20.0 10.9981 0.895 9.069 31.6365 4.10 178.7 23 21.0 11.1230 0.702 9.064 31.6910 4.04 176.0 25 22.0 11.0714 0.560 9.056 31.7642 4.01 174.6 28 23.0 10.9862 0.558 9.051 31.8064 3.96 172.5 26 24.0 10.9045 0.503 9.047 31.8239 3.85 167.6 28 25.0 10.8707 0.443 9.034 31.8337 3.69 160.6 24 26.0 10.8006 0.483 9.013 31.8443 3.56 155.3 21 27.0 10.6232 0.481 8.991 31.8565 3.54 154.3 20 28.0 10.2493 0.436 8.975 31.8618 3.66 159.4 20 29.0 10.1136 0.432 8.984 31.8670 4.06 176.9 25 30.0 10.0962 0.410 9.029 31.8746 4.44 193.5 26 31.0 10.2643 0.437 9.077 32.0016 4.49 195.5 28 32.0 10.5024 0.511 9.091 32.1110 4.24 184.7 27 33.0 10.5368 0.594 9.085 32.1776 3.87 168.6 24 34.0 10.3957 0.517 9.064 32.1784 3.62 157.5 22 35.0 10.3456 0.525 9.043 32.1972 3.56 155.0 22 36.0 10.2734 0.433 9.029 32.2692 3.56 155.0 26 37.0 10.1924 0.361 9.019 32.3523 3.54 154.4 29 38.0 10.0872 0.338 9.012 32.3758 3.53 153.9 27 39.0 10.0005 0.331 9.008 32.3914 3.54 154.1 22 40.0 9.8874 0.334 9.007 32.4222 3.62 157.8 24 41.0 9.8113 0.327 9.014 32.4529 3.83 166.7 23 42.0 9.7662 0.339 9.031 32.4684 3.91 170.4 25 43.0 9.7183 0.318 9.042 32.5097 3.94 171.8 25 44.0 9.6928 0.328 9.050 32.5457 4.03 175.7 24 45.0 9.6151 0.305 9.061 32.5731 4.03 175.6 26 46.0 9.5673 0.340 9.066 32.6183 3.94 171.7 25 47.0 9.5622 0.327 9.068 32.6299 3.86 168.0 23 48.0 9.5065 0.331 9.064 32.6525 3.70 161.3 18 49.0 9.3851 0.341 9.053 32.7006 3.55 154.5 23 50.0 9.3140 0.312 9.035 32.7179 3.46 150.5 25 51.0 9.2568 0.286 9.019 32.7250 3.39 147.5 27 52.0 9.2053 0.265 9.008 32.7314 3.31 144.3 25 53.0 9.1685 0.304 8.997 32.7395 3.22 140.1 23 54.0 9.1062 0.294 8.986 32.7556 3.16 137.6 24 55.0 9.0041 0.269 8.973 32.7835 3.15 137.0 25 56.0 8.8538 0.248 8.964 32.8218 3.15 137.0 31 57.0 8.7412 0.253 8.958 32.8640 3.14 136.7 31 58.0 8.6629 0.238 8.954 32.8914 3.14 136.8 23 59.0 8.6316 0.244 8.953 32.9044 3.14 136.5 21 60.0 8.6031 0.251 8.950 32.9176 3.12 135.9 18 61.0 8.5798 0.234 8.949 32.9286 3.12 135.9 20 62.0 8.5632 0.227 8.950 32.9353 3.11 135.6 24 63.0 8.5532 0.243 8.950 32.9395 3.10 135.1 29 64.0 8.5250 0.242 8.947 32.9517 3.09 134.5 29 65.0 8.4993 0.229 8.945 32.9631 3.05 132.7 26 66.0 8.4859 0.224 8.943 32.9694 3.01 131.0 22 67.0 8.4696 0.237 8.941 32.9767 2.96 128.8 20 68.0 8.4186 0.191 8.939 32.9988 2.92 127.2 22 69.0 8.3622 0.232 8.936 33.0234 2.89 125.9 23 70.0 8.2798 0.214 8.932 33.0575 2.89 126.0 32 71.0 8.2042 0.207 8.927 33.0882 2.91 126.7 32 72.0 8.1594 0.201 8.925 33.0999 2.98 129.6 23 73.0 8.1208 0.186 8.925 33.1106 3.02 131.6 21 74.0 8.0722 0.195 8.927 33.1233 3.03 131.9 21 75.0 8.0116 0.174 8.928 33.1351 3.06 133.4 23 76.0 7.9426 0.196 8.929 33.1563 3.13 136.2 27 77.0 7.9152 0.185 8.931 33.1664 3.16 137.6 27 78.0 7.8727 0.207 8.934 33.1670 3.14 136.6 24 79.0 7.8543 0.182 8.937 33.1716 3.12 135.6 23 80.0 7.8218 0.189 8.938 33.1873 3.05 132.9 23 81.0 7.8123 0.189 8.939 33.1999 2.93 127.6 26 82.0 7.7536 0.184 8.935 33.2300 2.81 122.3 28 83.0 7.7354 0.191 8.928 33.2583 2.81 122.1 28 84.0 7.7472 0.181 8.920 33.2690 2.75 119.7 24 85.0 7.7200 0.198 8.914 33.2766 2.69 116.9 24 86.0 7.7136 0.185 8.908 33.2864 2.57 111.7 22 87.0 7.7180 0.183 8.901 33.2946 2.55 111.1 24 88.0 7.7239 0.195 8.894 33.3094 2.55 110.9 27 89.0 7.7146 0.221 8.885 33.3188 2.54 110.5 19 90.0 7.6937 0.198 8.881 33.3266 2.54 110.5 22 91.0 7.6873 0.190 8.878 33.3322 2.54 110.7 5