*2014/05/20 14:40:56.84 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/10/18 15:30:56.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 48 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : AEA58CA9 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 51 2 Temperature:Secondary 'deg C (ITS90)' 9.3278 13.168 3 Fluorescence:URU:Wetlabs mg/m^3 0.248 10.281 4 pH:SBE:Nominal n/a 8.964 9.439 5 Salinity:T1:C1 PSS-78 30.6377 32.6099 6 Oxygen:Dissolved:SBE mL/L 3.15 6.99 7 Oxygen:Dissolved:SBE umol/kg 137.1919 305.0421 8 Number_of_bin_records n/a 6 31 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-65\Pro $END *ADMINISTRATION MISSION : 2013-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Coast of Vancouver Island STATION : VI 07 EVENT NUMBER : 43 LATITUDE : 49 3.25000 N ! (deg min) LONGITUDE : 126 6.47000 W ! (deg min) WATER DEPTH : 58 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2038 Conductivity ' ' 1763 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 4883 Conductivity:2 ' ' 3394 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/05/08 17:05:34 4060 4060 CLEAN 5.1 2014/05/08 17:08:31 4060 4060 SHIFTDAT 3.4 2014/05/09 14:40:19 4060 4060 SHIFTDAT 3.4 2014/05/09 15:24:58 4060 4060 SHIFTDAT 3.4 2014/05/09 15:27:08 4060 4060 DELETE 6.3 2014/05/09 15:32:41 4060 1252 CTDEDIT 5.0.4 2014/05/12 16:04:49 1252 1137 CALIB 11.8 2014/05/14 16:13:01 1137 1137 FILTERS 4.3 2014/05/14 16:17:39 1137 1137 BINAVE 4.1.1 2014/05/14 16:19:33 1137 48 REMOVECH 8.2 2014/05/14 16:20:21 48 48 CHGUNITS 3.1 2014/05/14 16:24:13 48 48 REORDER 1.3 2014/05/14 17:02:37 ? ? HDREDIT2 2.6 2014/05/20 14:40:56 ? ? $END $REMARKS -CLEAN functions: 2014/05/08 17:08:11 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.20 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 75.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 41.99 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/05/12 16:04:49 115 records were deleted in this editing session. 14 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/05/14 16:13:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/05/14 16:20:21 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperatur* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/20 14:40:56 Applied edit header: P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-65\2013-65-043.hex Software Version Seasave V 7.22.4 Temperature SN = 2038 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 18 2013 16:31:40 NMEA Latitude = 49 03.25 N NMEA Longitude = 126 06.47 W NMEA UTC (Time) = Oct 18 2013 15:30:56 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-65 Station: VI 07 Depth(m): 58 System UTC = Oct 18 2013 15:31:40 # nquan = 15 # nvalues = 4060 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 13 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 4060 # span 1 = 2.445, 51.988 # span 2 = 9.2623, 13.1700 # span 3 = 9.2592, 13.1704 # span 4 = 3.513004, 3.719010 # span 5 = 3.513042, 3.719257 # span 6 = 0.1425, 30.6822 # span 7 = 1.5995, 2.9988 # span 8 = 8.949, 9.448 # span 9 = 0, 1 # span 10 = 30.6324, 32.6428 # span 11 = 30.6330, 32.6425 # span 12 = 3.10266, 7.04942 # span 13 = -1.837, 2.136 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 18 2013 15:30:56 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2038 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34114478e-003 # 6.27604357e-004 # 1.92175718e-005 # 1.36370000e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1763 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.22314873e+000 # 5.07768024e-001 # -5.15940128e-004 # 5.09668877e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 30-Dec-13 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 4883 # 01-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38017391e-003 # 6.40020208e-004 # 2.12586690e-005 # 1.76262755e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3394 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.62060268e+000 # 1.47483016e+000 # -1.36190582e-003 # 1.93968125e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 03-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.7181e-001 # -0.5187 # -2.2511e-003 # 1.3917e-004 # -2.6436e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.4300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = May 08 2014 16:34:52, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-65\RAW\CTD\2013-65-0043.hex P:\Crui se_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = May 08 2014 16:37:26, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-65\Processing\convert\2013-65-004 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = May 08 2014 16:38:40, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-65\Processing\wildedit\2013-65-00 43.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = May 08 2014 17:00:02, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-65\Processing\align\2013-65-0043.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = May 08 2014 17:03:13, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-65\Processing\celltm\2013-65-0043.c nv P:\Cruise_Data_Processing\2013-65\Processing\doc\2013-65-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- The Fluorescence:URU:Wetlabs data are nominal and unedited except that some records were removed in editing temperature and salinity. The only calibration sampling was from about 10m, so recalibration could not be based on that information. Since there were post-cruise calibrations available, those parameters were used in processing the pressure, temperature, conductivity and dissolved oxygen sensor data. The factory calibrations of the temperature and conductivity sensors in January 2014 imply that there was no significant drift in secondary salinity since the previous factory service. No recalibration was applied to the secondary salinity. For events #7 and 16 the primary salinity was used: that channel was recalibrated based on how it compared with the secondary salinity. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. The data are unedited except that some records were removed in editing temperature and salinity. For details on the processing see processing report: 2013-65-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 13.1627 8.317 9.439 30.6377 6.99 305.0 6 5.0 13.1637 9.307 9.439 30.6381 6.90 300.9 29 6.0 13.1680 9.511 9.431 30.6482 6.74 294.3 27 7.0 13.1461 10.281 9.412 30.6858 6.56 286.4 25 8.0 13.0984 9.615 9.387 30.7564 6.29 274.4 22 9.0 13.0751 8.650 9.354 30.7882 6.16 268.6 21 10.0 12.9684 8.876 9.334 30.8333 6.07 264.8 19 11.0 12.8675 7.727 9.325 30.9925 5.99 261.4 20 12.0 12.9109 5.152 9.316 31.1299 5.91 257.8 21 13.0 13.0799 4.439 9.307 31.2486 5.78 252.1 23 14.0 13.0468 3.218 9.296 31.3027 5.62 244.9 23 15.0 12.9740 3.144 9.282 31.3094 5.51 240.3 25 16.0 12.9144 2.908 9.267 31.3335 5.44 237.4 24 17.0 12.7642 2.434 9.254 31.3354 5.32 232.0 23 18.0 12.6002 2.180 9.239 31.3204 5.14 224.0 25 19.0 12.4562 2.260 9.220 31.3148 5.05 220.4 23 20.0 12.3503 2.557 9.204 31.3371 5.03 219.1 24 21.0 12.2121 2.533 9.191 31.3898 5.08 221.5 24 22.0 12.1229 2.498 9.181 31.3934 5.15 224.7 23 23.0 12.0370 2.135 9.179 31.3861 5.18 225.7 23 24.0 11.9526 1.821 9.175 31.4199 5.18 225.8 25 25.0 11.9903 1.592 9.179 31.4573 5.19 226.3 26 26.0 12.0501 1.513 9.190 31.5244 5.14 224.0 27 27.0 12.3263 1.213 9.199 31.6927 5.05 220.4 26 28.0 12.3083 1.051 9.205 31.7406 5.03 219.1 24 29.0 12.2558 1.098 9.205 31.7630 4.99 217.4 25 30.0 12.1593 1.042 9.203 31.7638 4.96 216.1 23 31.0 12.0715 1.255 9.203 31.7886 4.80 209.1 25 32.0 12.1357 1.030 9.206 31.8504 4.46 194.4 25 33.0 12.0912 0.869 9.194 31.8709 4.12 179.5 24 34.0 11.9139 0.833 9.162 31.8697 3.91 170.3 23 35.0 11.1234 0.788 9.134 31.8568 3.83 167.1 22 36.0 10.7992 0.625 9.108 31.9041 3.81 166.1 22 37.0 10.5969 0.519 9.084 31.9499 3.80 165.5 26 38.0 10.4371 0.526 9.060 31.9672 3.67 159.8 31 39.0 10.4740 0.444 9.030 32.0207 3.48 151.8 30 40.0 10.2786 0.432 9.005 32.0260 3.41 148.5 25 41.0 10.0622 0.363 8.990 32.0276 3.40 148.2 22 42.0 9.9567 0.317 8.980 32.0389 3.39 147.8 21 43.0 9.9463 0.316 8.974 32.0949 3.38 147.4 22 44.0 9.8996 0.280 8.969 32.1973 3.40 148.2 23 45.0 9.8796 0.255 8.966 32.2301 3.45 150.1 23 46.0 9.8660 0.262 8.967 32.2515 3.57 155.6 24 47.0 9.8615 0.268 8.978 32.2740 3.62 157.6 27 48.0 9.9233 0.266 8.994 32.3583 3.40 147.9 28 49.0 9.9012 0.266 8.990 32.4650 3.15 137.3 25 50.0 9.8252 0.264 8.976 32.4934 3.15 137.2 22 51.0 9.3278 0.248 8.964 32.6099 3.29 143.1 21