*2014/05/01 10:07:03.34 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/03 22:25:17.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 33 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 45E8B235 NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 36 2 Temperature:Secondary 'deg C (ITS90)' 12.3054 20.8548 3 Transmissivity %/metre 10.4 52.9 4 Fluorescence:URU:Seapoint mg/m^3 0.726 7.47 5 PAR uE/m^2/sec 0 364.688 6 PAR:Reference uE/m^2/sec 2370.2 2372 7 pH:SBE:Nominal n/a 8.626 9.265 8 Salinity:T1:C1 PSS-78 23.601 26.9988 9 Oxygen:Dissolved:SBE mL/L 4.43 8.397 10 Oxygen:Dissolved:SBE umol/kg 193.8768 369.0067 11 Number_of_bin_records n/a 12 44 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-55\Pro $END *ADMINISTRATION MISSION : 2013-55 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Aquaculture Environmental Studies SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : MAL 12 EVENT NUMBER : 16 LATITUDE : 49 59.06000 N ! (deg min) LONGITUDE : 124 41.38000 W ! (deg min) WATER DEPTH : 39 ALTIMETER (M) : 2.78 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 3321 'Pressure:Digiquartz with TC' ' ' 77511 Temperature:2 ' ' 4700 Conductivity:2 ' ' 1766 Fluorometer:Seapoint ' ' 2356 'Oxygen:SBE 43' ' ' 0047 'Transmissometer:WET Labs C-Star' ' ' 1185DDR Altimeter ' ' ' ' pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4601 Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/02/11 14:25:42 3368 3368 CLEAN 5.1 2014/02/11 14:33:36 3368 3368 SHIFTDAT 3.4 2014/02/11 14:56:07 3368 3368 SHIFTDAT 3.4 2014/02/11 14:59:45 3368 3368 SHIFTDAT 3.4 2014/02/11 15:03:27 3368 3368 SHIFTDAT 3.4 2014/02/11 15:07:09 3368 3368 DELETE 6.3 2014/02/12 13:46:31 3368 1127 CTDEDIT 5.0.4 2014/04/28 08:49:44 1127 893 CALIB 11.8 2014/04/28 16:35:10 893 893 FILTERS 4.3 2014/04/28 16:36:12 893 893 BINAVE 4.1.1 2014/04/28 16:37:29 893 33 REMOVECH 8.2 2014/04/30 15:40:19 33 33 CHGUNITS 3.1 2014/05/01 10:06:29 33 33 REORDER 1.3 2014/05/01 10:06:42 ? ? HDREDIT2 2.6 2014/05/01 10:07:03 ? ? $END $REMARKS -CLEAN functions: 2014/02/11 14:33:29 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.30 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 70.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 26.94 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/28 08:49:44 234 records were deleted in this editing session. 7 changes in channel Salinity:T1:C1 -CALIB parameters: 2014/04/28 16:35:10 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1067200E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/30 15:40:19 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Altimeter [metres] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/01 10:07:03 Applied edit header: P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\CTD data\2013-55\2013-55-0016.hex Software Version Seasave V 7.22.4 Temperature SN = 4054 Conductivity SN = 3321 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 03 2013 15:27:53 NMEA Latitude = 49 59.06 N NMEA Longitude = 124 41.38 W NMEA UTC (Time) = Jul 03 2013 22:25:17 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 0 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: Vector Vector Station: Mal 12 Depth: 39 System UTC = Jul 03 2013 22:27:53 # nquan = 19 # nvalues = 3368 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = spar: SPAR/Surface Irradiance # name 11 = ph: pH # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = altM: Altimeter [m] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 18 = flag: flag # span 0 = 1, 3368 # span 1 = 2.624, 36.937 # span 2 = 12.1036, 21.4325 # span 3 = 12.1042, 21.1531 # span 4 = 3.188130, 3.447953 # span 5 = 3.187900, 3.432942 # span 6 = 56.4031, 85.7623 # span 7 = 6.8132e-01, 8.0733e+00 # span 8 = 1.9658, 3.7985 # span 9 = 1.0000e-12, 2.0187e+03 # span 10 = 2.3590e+03, 2.3720e+03 # span 11 = 8.551, 9.292 # span 12 = -1.092, 0.977 # span 13 = 0.00, 100.00 # span 14 = 0, 1 # span 15 = 23.3687, 28.3369 # span 16 = 23.3362, 27.1211 # span 17 = 4.08939, 8.27835 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 03 2013 22:25:17 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 05-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38616647e-003 # 6.44021277e-004 # 2.29653646e-005 # 2.07703526e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3321 # 30-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.95145189e+000 # 1.44572859e+000 # 5.86560922e-004 # 3.53926320e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 77511 # 22-Apr-11 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99989923 # -1.74061 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 4700 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34734833e-003 # 6.38029851e-004 # 2.09607631e-005 # 1.76044142e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12820479e+000 # 4.88252028e-001 # -6.06897281e-004 # 5.34819999e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2356 # # # 1 # 0.000 # # # # # # # # # 0047 # 21-Apr-12 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 5.2830e-001 # -0.6088 # -1.0307e-002 # 1.9950e-004 # -1.9680e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.1800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1185DDR # Jan 31-2013 # 19.6127 # -1.1179 # 0.000 # # # # # # # # 15.000 # 0.000 # # # # # # # # # 0692 # 29 Dec 2010 # 4.6518 # 2.5397 # # # # # # 4601 # Mar 2011 # 1.00000000 # 0.00000000 # 4219409282.69999980 # 1.00000000 # -0.34320000 # # # # # # # # # 16504 # 16-MAR-2011 # 1527.28000000 # 1.00000000 # # # # datcnv_date = Feb 11 2014 14:06:54, 7.22.5 [datcnv_vars = 15] # datcnv_in = P:\Cruise_Data_Processing\2013-55\RAW\CTD\2013-55-0016.hex P:\Crui se_Data_Processing\2013-55\Processing\doc\2013-55-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Feb 11 2014 14:13:43, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-55\Processing\convert\2013-55-001 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Feb 11 2014 14:18:41, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-55\Processing\wildedit\2013-55-00 16.cnv # alignctd_adv = sbeox0V 4.800 # celltm_date = Feb 11 2014 14:20:25, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-55\Processing\align\2013-55-0016.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Feb 11 2014 14:23:39, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-55\Processing\celltm\2013-55-0016.c nv P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top of the cast and some records corrupted by shed wakes; salinity was cleaned. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH:SBE, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 15db ±0.15 mL/L from 15 to 75db ±0.05 mL/L below 75db Salinity has not been recalibrated, but there may be a significant error. Incomplete flushing of Niskin bottles makes interpretation of the bottle comparison uncertain. If only bottles below 50db are included both salinity channels appeared to be close to bottles. There was a large change in at least one of the conductivity sensor calibrations between this cruise and the one that followed, so the post-cruise calibration cannot be applied to these data. Salinity is considered ±0.004. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-55-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0672) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T1:C1 : n: er_o ! Secondar vity URU: nce Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 4.0 20.8548 10.4 7.415 364.7 2370.6 9.243 23.6010 8.40 369.0 16 5.0 20.3995 16.4 7.470 116.7 2370.2 9.265 23.7798 7.18 315.4 12 6.0 18.9881 17.8 6.372 78.9 2370.2 9.251 24.1212 7.29 320.0 33 7.0 16.4220 20.5 4.039 42.7 2370.7 9.223 24.5713 7.39 324.1 34 8.0 16.0350 23.8 3.043 23.6 2370.3 9.185 24.6420 7.02 308.0 30 9.0 15.8975 32.3 2.605 13.8 2371.6 9.156 24.6836 6.50 285.0 30 10.0 15.8344 35.2 2.420 8.5 2371.9 9.128 24.7704 6.02 263.8 27 11.0 15.7840 39.4 2.043 5.4 2372.0 9.090 24.8373 5.63 247.0 27 12.0 15.1763 43.2 1.429 3.5 2372.0 9.052 25.1860 5.45 239.1 27 13.0 15.0685 44.5 1.268 2.3 2372.0 9.010 25.3781 5.34 234.2 23 14.0 14.9365 44.8 1.177 1.6 2372.0 8.970 25.6469 5.22 229.0 27 15.0 14.8144 44.6 1.165 1.2 2372.0 8.930 25.7781 5.21 228.3 27 16.0 14.6765 43.9 1.092 0.9 2371.3 8.896 25.9033 5.15 225.7 27 17.0 14.4405 44.5 1.100 0.6 2371.9 8.862 26.0103 5.09 223.0 26 18.0 14.1868 47.1 1.226 0.5 2371.8 8.830 26.1105 5.10 223.5 26 19.0 13.9917 46.3 1.162 0.4 2372.0 8.799 26.1843 5.12 224.3 25 20.0 13.8913 47.0 1.181 0.3 2372.0 8.778 26.2238 5.07 222.2 25 21.0 13.8142 47.4 1.182 0.2 2372.0 8.765 26.2431 5.01 219.5 25 22.0 13.6412 47.2 1.132 0.1 2372.0 8.757 26.3093 4.98 218.1 25 23.0 13.5019 48.2 1.127 0.1 2371.6 8.748 26.3696 4.92 215.4 25 24.0 13.3751 48.6 1.138 0.0 2371.0 8.738 26.4301 4.82 211.1 25 25.0 13.3240 49.0 1.155 0.0 2372.0 8.729 26.4546 4.72 206.5 25 26.0 13.2385 49.1 1.161 0.0 2371.7 8.721 26.4999 4.73 206.9 25 27.0 13.1300 48.6 1.045 0.0 2372.0 8.712 26.5567 4.71 206.1 25 28.0 13.0416 49.2 1.064 0.0 2372.0 8.702 26.6043 4.70 205.7 26 29.0 12.9534 48.3 0.979 0.0 2372.0 8.689 26.6487 4.70 205.7 25 30.0 12.8948 49.9 0.943 0.0 2372.0 8.679 26.6786 4.59 200.7 26 31.0 12.8409 50.0 0.940 0.0 2372.0 8.669 26.7075 4.53 198.4 28 32.0 12.7950 50.6 0.876 0.0 2372.0 8.656 26.7326 4.53 198.1 28 33.0 12.7372 50.2 0.835 0.0 2372.0 8.645 26.7618 4.43 193.9 28 34.0 12.6691 50.7 0.738 0.0 2372.0 8.636 26.7988 4.45 194.7 40 35.0 12.5191 50.4 0.726 0.0 2372.0 8.626 26.8750 4.73 206.8 44 36.0 12.3054 52.9 0.831 0.0 2372.0 8.629 26.9988 4.72 206.6 22