*2014/05/01 10:07:03.26 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/03 17:51:18.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 19 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 85554B11 NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 22 2 Temperature:Secondary 'deg C (ITS90)' 13.2358 21.4583 3 Transmissivity %/metre 13.5 47.7 4 Fluorescence:URU:Seapoint mg/m^3 0.999 5.943 5 PAR uE/m^2/sec 0 37.984 6 PAR:Reference uE/m^2/sec 2244.51 2266.073 7 pH:SBE:Nominal n/a 8.713 9.233 8 Salinity:T1:C1 PSS-78 23.588 26.5137 9 Oxygen:Dissolved:SBE mL/L 4.655 7.253 10 Oxygen:Dissolved:SBE umol/kg 203.7921 318.3 11 Number_of_bin_records n/a 10 39 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-55\Pro $END *ADMINISTRATION MISSION : 2013-55 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Aquaculture Environmental Studies SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : MAL 6 EVENT NUMBER : 5 LATITUDE : 49 58.48000 N ! (deg min) LONGITUDE : 124 40.88000 W ! (deg min) WATER DEPTH : 25 ALTIMETER (M) : 2.3 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 3321 'Pressure:Digiquartz with TC' ' ' 77511 Temperature:2 ' ' 4700 Conductivity:2 ' ' 1766 Fluorometer:Seapoint ' ' 2356 'Oxygen:SBE 43' ' ' 0047 'Transmissometer:WET Labs C-Star' ' ' 1185DDR Altimeter ' ' ' ' pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4601 Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/02/11 14:25:40 2980 2980 CLEAN 5.1 2014/02/11 14:33:34 2980 2980 SHIFTDAT 3.4 2014/02/11 14:56:05 2980 2980 SHIFTDAT 3.4 2014/02/11 14:59:44 2980 2980 SHIFTDAT 3.4 2014/02/11 15:03:25 2980 2980 SHIFTDAT 3.4 2014/02/11 15:07:07 2980 2980 DELETE 6.3 2014/02/12 13:46:30 2980 781 CTDEDIT 5.0.4 2014/04/26 17:03:46 781 631 CALIB 11.8 2014/04/28 16:35:09 631 631 FILTERS 4.3 2014/04/28 16:36:12 631 631 BINAVE 4.1.1 2014/04/28 16:37:29 631 19 REMOVECH 8.2 2014/04/30 15:40:19 19 19 CHGUNITS 3.1 2014/05/01 10:06:28 19 19 REORDER 1.3 2014/05/01 10:06:42 ? ? HDREDIT2 2.6 2014/05/01 10:07:03 ? ? $END $REMARKS -CLEAN functions: 2014/02/11 14:33:29 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.30 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 70.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 12.42 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/26 17:03:46 150 records were deleted in this editing session. 1 change in channel Salinity:T1:C1 -CALIB parameters: 2014/04/28 16:35:09 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1067200E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/30 15:40:19 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Altimeter [metres] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/05/01 10:07:03 Applied edit header: P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\CTD data\2013-55\2013-55-0005.hex Software Version Seasave V 7.22.4 Temperature SN = 4054 Conductivity SN = 3321 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 03 2013 10:53:13 NMEA Latitude = 49 58.48 N NMEA Longitude = 124 40.88 W NMEA UTC (Time) = Jul 03 2013 17:51:18 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 0 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: Vector Vector Station: Mal 6 Depth: 25 System UTC = Jul 03 2013 17:53:13 # nquan = 19 # nvalues = 2980 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = spar: SPAR/Surface Irradiance # name 11 = ph: pH # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = altM: Altimeter [m] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 18 = flag: flag # span 0 = 1, 2980 # span 1 = 2.415, 22.421 # span 2 = 13.2180, 22.1197 # span 3 = 13.2194, 21.7608 # span 4 = 3.187903, 3.495303 # span 5 = 3.186541, 3.483886 # span 6 = 53.0266, 84.0620 # span 7 = 8.7546e-01, 6.4505e+00 # span 8 = 2.1001, 3.5983 # span 9 = 1.0000e-12, 1.9245e+03 # span 10 = 2.2135e+03, 2.2751e+03 # span 11 = 8.670, 9.383 # span 12 = -0.604, 0.723 # span 13 = 0.00, 100.00 # span 14 = 0, 1 # span 15 = 23.4397, 26.5253 # span 16 = 23.5185, 26.5224 # span 17 = 4.33076, 8.06130 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 03 2013 17:51:18 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 05-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38616647e-003 # 6.44021277e-004 # 2.29653646e-005 # 2.07703526e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3321 # 30-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.95145189e+000 # 1.44572859e+000 # 5.86560922e-004 # 3.53926320e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 77511 # 22-Apr-11 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99989923 # -1.74061 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 4700 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34734833e-003 # 6.38029851e-004 # 2.09607631e-005 # 1.76044142e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12820479e+000 # 4.88252028e-001 # -6.06897281e-004 # 5.34819999e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2356 # # # 1 # 0.000 # # # # # # # # # 0047 # 21-Apr-12 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 5.2830e-001 # -0.6088 # -1.0307e-002 # 1.9950e-004 # -1.9680e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.1800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1185DDR # Jan 31-2013 # 19.6127 # -1.1179 # 0.000 # # # # # # # # 15.000 # 0.000 # # # # # # # # # 0692 # 29 Dec 2010 # 4.6518 # 2.5397 # # # # # # 4601 # Mar 2011 # 1.00000000 # 0.00000000 # 4219409282.69999980 # 1.00000000 # -0.34320000 # # # # # # # # # 16504 # 16-MAR-2011 # 1527.28000000 # 1.00000000 # # # # datcnv_date = Feb 11 2014 14:06:52, 7.22.5 [datcnv_vars = 15] # datcnv_in = P:\Cruise_Data_Processing\2013-55\RAW\CTD\2013-55-0005.hex P:\Crui se_Data_Processing\2013-55\Processing\doc\2013-55-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Feb 11 2014 14:13:42, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-55\Processing\convert\2013-55-000 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Feb 11 2014 14:18:40, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-55\Processing\wildedit\2013-55-00 05.cnv # alignctd_adv = sbeox0V 4.800 # celltm_date = Feb 11 2014 14:20:24, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-55\Processing\align\2013-55-0005.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Feb 11 2014 14:23:39, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-55\Processing\celltm\2013-55-0005.c nv P:\Cruise_Data_Processing\2013-55\Processing\doc\2013-55-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top of the cast and some records corrupted by shed wakes; salinity was cleaned. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH:SBE, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 15db ±0.15 mL/L from 15 to 75db ±0.05 mL/L below 75db Salinity has not been recalibrated, but there may be a significant error. Incomplete flushing of Niskin bottles makes interpretation of the bottle comparison uncertain. If only bottles below 50db are included both salinity channels appeared to be close to bottles. There was a large change in at least one of the conductivity sensor calibrations between this cruise and the one that followed, so the post-cruise calibration cannot be applied to these data. Salinity is considered ±0.004. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-55-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0672) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T1:C1 : n: er_o ! Secondar vity URU: nce Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 4.0 21.4583 13.5 5.943 38.0 2263.5 9.233 23.5880 7.10 312.1 21 5.0 20.6080 14.3 5.666 21.0 2262.3 9.221 23.8326 7.19 315.8 24 6.0 17.6810 20.7 3.360 12.3 2259.9 9.226 24.4198 7.25 318.3 39 7.0 16.4227 32.1 2.483 6.5 2260.6 9.216 24.5324 6.59 289.2 37 8.0 15.7513 38.6 2.019 3.6 2254.6 9.188 24.7244 6.15 269.7 34 9.0 15.3558 43.0 1.405 1.6 2244.5 9.123 25.1119 5.83 255.6 10 10.0 15.2313 43.4 1.263 1.2 2244.7 9.088 25.2687 5.62 246.1 29 11.0 15.1870 44.9 1.087 0.8 2252.7 9.051 25.3796 5.33 233.8 26 12.0 15.0062 46.3 0.999 0.6 2256.8 9.010 25.5574 5.04 220.9 39 13.0 14.8548 46.4 1.058 0.4 2257.3 8.975 25.7303 4.94 216.4 37 14.0 14.6735 46.5 1.035 0.3 2259.6 8.933 25.8984 4.83 211.5 38 15.0 14.4739 46.6 1.038 0.3 2262.7 8.882 25.9996 4.91 215.0 39 16.0 14.1379 46.2 1.043 0.2 2261.7 8.845 26.1368 4.85 212.4 38 17.0 13.8202 47.0 1.125 0.2 2248.0 8.811 26.2608 4.74 207.4 38 18.0 13.6819 47.0 1.157 0.1 2258.4 8.785 26.3191 4.71 206.3 39 19.0 13.5440 46.6 1.173 0.1 2264.8 8.765 26.3783 4.66 204.0 38 20.0 13.3441 47.1 1.199 0.0 2264.6 8.752 26.4644 4.66 203.8 38 21.0 13.2517 47.7 1.072 0.0 2265.1 8.723 26.5062 4.73 207.1 38 22.0 13.2358 47.5 1.013 0.0 2266.1 8.713 26.5137 4.71 206.3 26