*2016/07/14 15:17:30.70 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/06 20:47:24.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 80 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 46FF120F NUMBER OF CHANNELS : 9 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 81 2 Temperature:Primary 'deg C (ITS90)' 7.8446 17.1484 3 Transmissivity %/metre 30.5 56.2 4 Fluorescence:URU:Seapoint mg/m^3 2.766 3.916 5 PAR uE/m^2/sec 0.9E-02 1407.812 6 Salinity:T0:C0 PSS-78 27.7122 32.7077 7 Oxygen:Dissolved:SBE mL/L 1.526 7.968 8 Oxygen:Dissolved:SBE umol/kg 66.43123 348.2923 9 Number_of_bin_records n/a 8 42 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-50\Pro $END *ADMINISTRATION MISSION : 2013-50 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : WCVI and Northern Inlet Moorings SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI and Northern Inlets STATION : EF11 EVENT NUMBER : 40 LATITUDE : 48 59.11000 N ! (deg min) LONGITUDE : 125 11.09000 W ! (deg min) WATER DEPTH : 84 ALTIMETER (M) : 3.42 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2668 Conductivity:2 ' ' 2754 Fluorometer:Seapoint ' ' 2228 'Oxygen:SBE 43' ' ' 0997 'Transmissometer:WET Labs C-Star' ' ' 1396 Altimeter ' ' 1204 PAR/Irradiance:Biospherical/Licor ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/01/06 17:14:06 21295 21295 CLEAN 5.1 2014/01/06 17:18:00 21295 21295 SHIFTDAT 3.4 2014/01/14 16:06:33 21295 21295 SHIFTDAT 3.4 2014/01/14 17:38:52 21295 21295 SHIFTDAT 3.4 2014/01/14 17:42:38 21295 21295 DELETE 6.3 2014/01/14 17:45:11 21295 2178 CTDEDIT 5.0.4 2014/01/15 17:07:17 2178 2006 CALIB 11.8 2014/01/16 09:20:35 2006 2006 FILTERS 4.3 2014/01/16 10:01:06 2006 2006 BINAVE 4.1.1 2014/01/16 10:01:22 2006 80 REMOVECH 8.2 2014/01/16 10:59:45 80 80 CHGUNITS 3.1 2014/01/16 11:02:05 80 80 REORDER 1.3 2014/01/16 11:02:58 ? ? HDREDIT2 2.6 2014/01/16 11:11:08 ? ? HDREDIT2 3.0.2 2016/07/14 15:17:30 ? ? $END $REMARKS -CLEAN functions: 2014/01/06 17:14:37 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.40 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 70.74 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/01/15 17:07:17 172 records were deleted in this editing session. 34 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/01/16 09:20:35 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1054500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/01/16 10:59:45 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/01/16 11:11:08 Applied edit header: P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -HEADER EDITS: 2016/07/14 15:17:30 Applied edit header: P:\Cruise_Data_Processing\2013-FL\2013-HDR-FL.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\Data\2013-50\2013-50-0040.hex Software Version Seasave V 7.22.4 Temperature SN = 2023 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 06 2013 13:47:21 NMEA Latitude = 48 59.11 N NMEA Longitude = 125 11.09 W NMEA UTC (Time) = Jul 06 2013 20:47:24 Store Lat/Lon Data = Append to Every Scan Ship: J P Tully Cruise: 2013-50 Depth: 84 Station: EF11 System UTC = Jul 06 2013 20:47:21 # nquan = 17 # nvalues = 21295 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = altM: Altimeter [m] # name 11 = dz/dtM: Descent Rate [m/s] # name 12 = pumps: Pump Status # name 13 = sal00: Salinity, Practical [PSU] # name 14 = sal11: Salinity, Practical, 2 [PSU] # name 15 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 16 = flag: flag # span 0 = 1, 21295 # span 1 = -0.240, 80.736 # span 2 = -19.8458, 99.0000 # span 3 = 7.8365, 20.1208 # span 4 = 0.441532, 3.658668 # span 5 = 0.435676, 3.665973 # span 6 = 55.5034, 93.7253 # span 7 = 0.0000e+00, 4.0916e+00 # span 8 = 0.9670, 3.8278 # span 9 = 6.9472e-03, 4.3651e+03 # span 10 = 0.00, 100.00 # span 11 = -0.784, 1.023 # span 12 = 0, 1 # span 13 = 2.7014, 67.7384 # span 14 = 2.6481, 32.7117 # span 15 = -112.49517, 42.44274 # span 16 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 06 2013 20:47:24 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2023 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.11056177e-003 # 6.24714349e-004 # 1.97891287e-005 # 1.88702998e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00955037e+001 # 1.35324049e+000 # -2.33974617e-003 # 2.26260145e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 23-Mar-13 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99985327 # 3.73990 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2668 # 01-Feb-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35639086e-003 # 6.48643105e-004 # 2.44567925e-005 # 2.40597452e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05984808e+001 # 1.61542018e+000 # -2.38112540e-003 # 2.73092331e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2228 # # # 1 # 0.000 # # # # # # # # # 0997 # 16-Feb-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4081e-001 # -0.4850 # -2.4308e-003 # 1.3327e-004 # -2.5567e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.5900 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1396 # Jan 31st 2013 # 18.8463 # 0.0000 # 0.250 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # # # # 4615 # 16th of March 2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Nov 06 2013 17:00:36, 7.22.5 [datcnv_vars = 13] # datcnv_in = P:\Cruise_Data_Processing\2013-50\RAW\CTD\2013-50-0040.hex P:\Crui se_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 07 2013 08:41:51, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-50\Processing\convert\2013-50-004 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 07 2013 09:19:57, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-50\Processing\wildedit\2013-50-00 40.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Nov 07 2013 09:22:22, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-50\Processing\align\2013-50-0040.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 07 2013 09:24:20, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-50\Processing\celltm\2013-50-0040.c nv P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove surface records and records corrupted by shed wakes; salinity was cleaned lightly. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.25 mL/L from 0 to 100db ±0.10 mL/L from 100 to 400db ±0.05 mL/L below 400db The two CTD salinity channels were generally within 0.001 of each other. The comparison with bottles had a lot of scatter, but the average differences showed that both CTD salinity channels were well within 0.001 of bottle values. During a May 2013 cruise with more deep sampling, both salinity channels were found to be within 0.001 of bottle samples. SBE Fluorescence data from this sensor are considered unreliable. Dark values are much higher than expected from this cruise and other cruises in May and June 2013 and appear to be increasing with time. Fluorescence values have also been lower than usual relative to bottles, particularly at higher chlorophyll values. The data are provided since the shape may be useful. For details on the processing see the report: 2013-50-proc.doc. --------------------------------------------------------------------------------- WARNING: SeaPoint Fluorometer #2228 malfunctioned during the latter half of 2013. There were large values at great depth that got steadily higher through the year until it was removed from service. The data have been left in the file so researchers can see the shape of the profile. Comparison with extracted chlorophyll is recommended. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0545) $END !--1--- ---2---- --3-- ---4--- --5--- ---6---- --7--- --8-- -9-- !Pressu Temperat Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 2.0 17.1484 32.1 2.991 1407.8 27.7122 7.85 343.5 8 3.0 15.2904 34.0 2.960 1196.1 29.0237 7.97 348.3 42 4.0 13.1728 39.8 2.986 962.6 30.4950 7.91 345.4 33 5.0 12.6352 34.0 3.121 747.9 30.8475 7.16 312.5 30 6.0 12.4055 32.6 3.228 591.1 30.9891 6.71 292.8 29 7.0 11.7869 30.5 3.667 468.4 31.1329 6.42 279.8 29 8.0 11.3561 32.4 3.916 359.9 31.2553 6.00 261.8 27 9.0 10.9204 45.9 3.580 271.8 31.3722 5.42 236.5 27 10.0 10.6762 52.0 3.272 219.8 31.4501 5.00 217.8 27 11.0 10.4491 52.5 3.114 184.1 31.4961 4.90 213.5 27 12.0 10.1675 53.3 3.052 151.9 31.5580 4.75 206.9 27 13.0 10.0049 54.0 2.955 128.4 31.5916 4.50 196.3 27 14.0 9.9128 54.6 2.891 109.2 31.6139 4.24 184.7 24 15.0 9.7672 54.9 2.848 92.9 31.6722 3.98 173.6 25 16.0 9.6938 55.1 2.837 79.6 31.6952 3.83 166.8 24 17.0 9.5172 55.3 2.834 68.6 31.7637 3.71 161.5 25 18.0 9.4324 55.6 2.823 58.9 31.7904 3.62 157.8 25 19.0 9.3720 55.5 2.818 50.8 31.8135 3.60 156.9 24 20.0 9.2901 55.7 2.818 44.2 31.8464 3.57 155.5 24 21.0 9.2282 56.0 2.809 38.4 31.8692 3.51 153.0 24 22.0 9.1977 56.2 2.815 33.4 31.8823 3.43 149.3 25 23.0 9.1658 56.2 2.811 29.0 31.8996 3.36 146.3 24 24.0 9.1102 56.0 2.817 25.3 31.9235 3.28 143.0 24 25.0 9.0574 56.0 2.817 22.1 31.9469 3.24 141.0 25 26.0 9.0053 56.2 2.827 19.3 31.9724 3.22 140.2 24 27.0 8.9438 55.9 2.826 16.9 32.0092 3.20 139.6 25 28.0 8.9059 56.0 2.819 14.8 32.0346 3.18 138.4 24 29.0 8.8805 55.9 2.818 13.0 32.0549 3.14 136.8 24 30.0 8.8621 55.8 2.817 11.4 32.0698 3.14 136.6 25 31.0 8.8354 55.7 2.825 10.0 32.0880 3.13 136.5 24 32.0 8.7983 55.7 2.824 8.8 32.1143 3.12 135.9 24 33.0 8.7806 55.5 2.827 7.8 32.1345 3.12 135.8 24 34.0 8.7644 55.5 2.823 6.8 32.1489 3.11 135.4 25 35.0 8.7541 55.4 2.824 6.0 32.1583 3.10 134.9 24 36.0 8.7384 55.2 2.815 5.3 32.1695 3.08 134.2 24 37.0 8.7245 55.4 2.808 4.7 32.1800 3.05 132.7 24 38.0 8.7131 55.4 2.813 4.1 32.1897 3.02 131.5 24 39.0 8.7030 55.3 2.813 3.6 32.1952 3.09 134.4 24 40.0 8.6699 55.2 2.808 3.2 32.2174 3.17 137.9 24 41.0 8.6416 54.4 2.810 2.8 32.2349 3.12 135.8 25 42.0 8.6362 54.8 2.808 2.5 32.2530 3.02 131.6 24 43.0 8.6346 56.0 2.806 2.2 32.2563 3.02 131.4 24 44.0 8.6151 56.1 2.805 1.9 32.2642 2.97 129.4 24 45.0 8.5990 55.2 2.799 1.7 32.2769 2.90 126.1 25 46.0 8.5794 54.7 2.804 1.5 32.2940 2.81 122.2 24 47.0 8.5420 54.6 2.802 1.3 32.3124 2.71 118.2 24 48.0 8.5119 54.2 2.798 1.2 32.3251 2.64 114.9 24 49.0 8.4801 53.6 2.796 1.1 32.3341 2.61 113.5 24 50.0 8.4285 50.4 2.800 0.9 32.3605 2.60 113.0 24 51.0 8.3854 51.6 2.794 0.8 32.3807 2.58 112.5 24 52.0 8.3694 51.8 2.795 0.7 32.3918 2.56 111.4 25 53.0 8.3465 51.5 2.799 0.6 32.4049 2.50 108.9 24 54.0 8.3400 51.1 2.802 0.6 32.4113 2.46 107.3 24 55.0 8.3146 50.9 2.799 0.5 32.4209 2.41 105.0 25 56.0 8.2850 50.5 2.795 0.4 32.4351 2.36 102.6 24 57.0 8.2593 50.1 2.793 0.4 32.4510 2.33 101.3 25 58.0 8.2206 48.2 2.799 0.3 32.4707 2.31 100.5 23 59.0 8.1968 46.8 2.803 0.3 32.4833 2.30 100.2 25 60.0 8.1820 48.9 2.805 0.2 32.4895 2.27 98.8 22 61.0 8.1759 48.7 2.802 0.2 32.4936 2.22 96.6 24 62.0 8.1690 48.6 2.808 0.2 32.4972 2.18 94.8 21 63.0 8.1420 48.3 2.803 0.2 32.5115 2.13 93.0 25 64.0 8.1073 48.3 2.801 0.1 32.5314 2.10 91.4 25 65.0 8.0870 47.7 2.804 0.1 32.5431 2.08 90.3 24 66.0 8.0661 47.1 2.803 0.1 32.5538 2.05 89.4 25 67.0 8.0442 46.8 2.803 0.1 32.5683 2.01 87.6 24 68.0 8.0342 46.6 2.802 0.1 32.5724 1.95 85.0 25 69.0 8.0277 46.7 2.800 0.1 32.5758 1.92 83.4 25 70.0 7.9849 46.5 2.806 0.1 32.6027 1.89 82.1 25 71.0 7.9618 45.5 2.807 0.0 32.6177 1.87 81.4 25 72.0 7.9500 44.9 2.806 0.0 32.6261 1.85 80.7 25 73.0 7.9352 44.0 2.805 0.0 32.6366 1.83 79.8 24 74.0 7.9276 43.2 2.806 0.0 32.6416 1.81 79.0 25 75.0 7.9212 42.6 2.805 0.0 32.6465 1.80 78.4 23 76.0 7.9102 42.1 2.803 0.0 32.6549 1.76 76.6 24 77.0 7.9027 41.5 2.811 0.0 32.6600 1.72 74.7 24 78.0 7.8970 41.3 2.804 0.0 32.6642 1.71 74.6 25 79.0 7.8772 40.8 2.797 0.0 32.6796 1.75 76.2 24 80.0 7.8597 39.1 2.802 0.0 32.6929 1.69 73.6 28 81.0 7.8446 32.8 2.766 0.0 32.7077 1.53 66.4 33