*2016/07/14 15:17:30.62 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/06 19:47:09.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 52 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 249E9480 NUMBER OF CHANNELS : 9 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 53 2 Temperature:Primary 'deg C (ITS90)' 8.4166 16.9802 3 Transmissivity %/metre 33.1 55.8 4 Fluorescence:URU:Seapoint mg/m^3 2.743 2.91 5 PAR uE/m^2/sec 0.504 882.711 6 Salinity:T0:C0 PSS-78 27.0467 32.3478 7 Oxygen:Dissolved:SBE mL/L 2.617 7.753 8 Oxygen:Dissolved:SBE umol/kg 113.9726 339.1157 9 Number_of_bin_records n/a 7 28 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-50\Pro $END *ADMINISTRATION MISSION : 2013-50 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : WCVI and Northern Inlet Moorings SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI and Northern Inlets STATION : EF09 EVENT NUMBER : 38 LATITUDE : 49 0.12000 N ! (deg min) LONGITUDE : 125 10.84000 W ! (deg min) WATER DEPTH : 57 ALTIMETER (M) : 3.42 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2668 Conductivity:2 ' ' 2754 Fluorometer:Seapoint ' ' 2228 'Oxygen:SBE 43' ' ' 0997 'Transmissometer:WET Labs C-Star' ' ' 1396 Altimeter ' ' 1204 PAR/Irradiance:Biospherical/Licor ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/01/06 17:13:55 20323 20323 CLEAN 5.1 2014/01/06 17:17:47 20323 20323 SHIFTDAT 3.4 2014/01/14 16:06:22 20323 20323 SHIFTDAT 3.4 2014/01/14 17:38:41 20323 20323 SHIFTDAT 3.4 2014/01/14 17:42:26 20323 20323 DELETE 6.3 2014/01/14 17:45:04 20323 1515 CTDEDIT 5.0.4 2014/01/15 17:03:30 1515 1272 CALIB 11.8 2014/01/16 09:20:34 1272 1272 FILTERS 4.3 2014/01/16 10:01:05 1272 1272 BINAVE 4.1.1 2014/01/16 10:01:22 1272 52 REMOVECH 8.2 2014/01/16 10:59:45 52 52 CHGUNITS 3.1 2014/01/16 11:02:05 52 52 REORDER 1.3 2014/01/16 11:02:58 ? ? HDREDIT2 2.6 2014/01/16 11:11:08 ? ? HDREDIT2 3.0.2 2016/07/14 15:17:30 ? ? $END $REMARKS -CLEAN functions: 2014/01/06 17:14:37 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.40 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 43.46 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/01/15 17:03:30 243 records were deleted in this editing session. 13 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/01/16 09:20:34 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1054500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/01/16 10:59:45 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/01/16 11:11:08 Applied edit header: P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -HEADER EDITS: 2016/07/14 15:17:30 Applied edit header: P:\Cruise_Data_Processing\2013-FL\2013-HDR-FL.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\Data\2013-50\2013-50-0038.hex Software Version Seasave V 7.22.4 Temperature SN = 2023 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 06 2013 12:47:06 NMEA Latitude = 49 00.12 N NMEA Longitude = 125 10.84 W NMEA UTC (Time) = Jul 06 2013 19:47:09 Store Lat/Lon Data = Append to Every Scan Ship: J P Tully Cruise: 2013-50 Depth: 57 Station: EF09 System UTC = Jul 06 2013 19:47:06 # nquan = 17 # nvalues = 20323 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = altM: Altimeter [m] # name 11 = dz/dtM: Descent Rate [m/s] # name 12 = pumps: Pump Status # name 13 = sal00: Salinity, Practical [PSU] # name 14 = sal11: Salinity, Practical, 2 [PSU] # name 15 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 16 = flag: flag # span 0 = 1, 20323 # span 1 = -0.013, 53.460 # span 2 = -54.6830, 99.0000 # span 3 = 8.3538, 19.7939 # span 4 = 0.329428, 3.777542 # span 5 = 0.401824, 3.654145 # span 6 = 44.8491, 92.0914 # span 7 = 3.2234e-01, 4.0842e+00 # span 8 = 1.2882, 3.8083 # span 9 = 4.4657e-01, 4.5276e+03 # span 10 = 0.00, 100.00 # span 11 = -0.843, 1.039 # span 12 = 0, 1 # span 13 = 1.9689, 1591.1759 # span 14 = 2.4347, 32.3851 # span 15 = -336.48579, 42.33633 # span 16 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 06 2013 19:47:09 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2023 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.11056177e-003 # 6.24714349e-004 # 1.97891287e-005 # 1.88702998e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00955037e+001 # 1.35324049e+000 # -2.33974617e-003 # 2.26260145e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 23-Mar-13 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99985327 # 3.73990 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2668 # 01-Feb-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35639086e-003 # 6.48643105e-004 # 2.44567925e-005 # 2.40597452e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05984808e+001 # 1.61542018e+000 # -2.38112540e-003 # 2.73092331e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2228 # # # 1 # 0.000 # # # # # # # # # 0997 # 16-Feb-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4081e-001 # -0.4850 # -2.4308e-003 # 1.3327e-004 # -2.5567e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.5900 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1396 # Jan 31st 2013 # 18.8463 # 0.0000 # 0.250 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # # # # 4615 # 16th of March 2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Nov 06 2013 17:00:31, 7.22.5 [datcnv_vars = 13] # datcnv_in = P:\Cruise_Data_Processing\2013-50\RAW\CTD\2013-50-0038.hex P:\Crui se_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 07 2013 08:41:48, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-50\Processing\convert\2013-50-003 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 07 2013 09:19:54, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-50\Processing\wildedit\2013-50-00 38.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Nov 07 2013 09:22:19, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-50\Processing\align\2013-50-0038.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 07 2013 09:24:16, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-50\Processing\celltm\2013-50-0038.c nv P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove surface records and records corrupted by shed wakes; salinity was cleaned lightly. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.25 mL/L from 0 to 100db ±0.10 mL/L from 100 to 400db ±0.05 mL/L below 400db The two CTD salinity channels were generally within 0.001 of each other. The comparison with bottles had a lot of scatter, but the average differences showed that both CTD salinity channels were well within 0.001 of bottle values. During a May 2013 cruise with more deep sampling, both salinity channels were found to be within 0.001 of bottle samples. SBE Fluorescence data from this sensor are considered unreliable. Dark values are much higher than expected from this cruise and other cruises in May and June 2013 and appear to be increasing with time. Fluorescence values have also been lower than usual relative to bottles, particularly at higher chlorophyll values. The data are provided since the shape may be useful. For details on the processing see the report: 2013-50-proc.doc. --------------------------------------------------------------------------------- WARNING: SeaPoint Fluorometer #2228 malfunctioned during the latter half of 2013. There were large values at great depth that got steadily higher through the year until it was removed from service. The data have been left in the file so researchers can see the shape of the profile. Comparison with extracted chlorophyll is recommended. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0545) $END !--1--- ---2---- --3-- ---4--- --5--- ---6---- --7--- --8-- -9-- !Pressu Temperat Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 2.0 16.9802 33.1 2.902 882.7 27.0467 7.66 335.4 7 3.0 15.4562 36.2 2.892 311.2 28.2013 7.75 339.1 27 4.0 13.8045 41.5 2.889 172.7 29.5342 7.63 333.4 28 5.0 13.4605 43.3 2.910 115.9 30.1125 7.43 324.2 26 6.0 12.5057 44.5 2.908 85.5 30.4107 7.23 315.5 26 7.0 12.3520 46.6 2.883 67.2 30.4730 6.72 293.1 26 8.0 11.8299 47.2 2.873 54.3 30.8537 6.26 273.2 24 9.0 11.0655 49.2 2.842 44.1 31.2085 6.05 263.8 27 10.0 10.6836 51.8 2.801 35.9 31.3356 5.84 254.7 28 11.0 10.4135 53.4 2.785 29.9 31.4203 5.41 236.0 27 12.0 10.3476 53.7 2.800 25.7 31.4397 4.95 215.8 27 13.0 10.1152 54.5 2.794 22.7 31.5192 4.25 185.4 26 14.0 9.9493 54.6 2.791 20.4 31.5802 3.78 164.8 26 15.0 9.7135 54.9 2.777 18.4 31.6681 3.66 159.6 25 16.0 9.3473 55.2 2.757 16.8 31.8181 3.61 157.1 24 17.0 9.3060 55.5 2.745 15.4 31.8336 3.61 157.5 25 18.0 9.2023 55.6 2.743 14.1 31.8798 3.63 158.4 23 19.0 9.1777 55.6 2.743 13.0 31.8914 3.61 157.2 24 20.0 9.1701 55.7 2.749 11.9 31.8962 3.60 156.7 24 21.0 9.1545 55.8 2.752 11.0 31.9052 3.58 156.0 24 22.0 9.1419 55.7 2.759 10.1 31.9123 3.57 155.7 24 23.0 9.1316 55.5 2.756 9.3 31.9181 3.56 155.3 24 24.0 9.1176 55.6 2.756 8.6 31.9260 3.54 154.3 25 25.0 9.1180 55.6 2.759 7.9 31.9271 3.50 152.3 25 26.0 9.1126 55.5 2.760 7.3 31.9308 3.40 147.9 20 27.0 9.1068 55.8 2.758 6.7 31.9347 3.29 143.3 25 28.0 9.0716 55.7 2.756 6.2 31.9520 3.20 139.3 24 29.0 8.9809 55.7 2.756 5.7 31.9991 3.12 136.0 25 30.0 8.9438 55.5 2.760 5.3 32.0202 3.06 133.5 24 31.0 8.8657 55.6 2.757 4.9 32.0669 3.02 131.6 24 32.0 8.8140 55.5 2.756 4.5 32.1007 2.99 130.1 24 33.0 8.7717 55.2 2.760 4.1 32.1296 2.96 128.8 24 34.0 8.7019 55.4 2.753 3.7 32.1796 2.94 127.9 24 35.0 8.6656 54.7 2.753 3.4 32.1960 2.93 127.7 19 36.0 8.6624 54.3 2.756 3.1 32.1960 2.94 127.9 24 37.0 8.6626 54.2 2.758 2.9 32.1966 2.94 128.0 25 38.0 8.6551 54.0 2.755 2.6 32.2023 2.92 127.0 25 39.0 8.6533 54.2 2.755 2.4 32.2045 2.88 125.4 24 40.0 8.6487 54.4 2.759 2.1 32.2083 2.86 124.7 25 41.0 8.6323 54.2 2.757 1.9 32.2193 2.84 123.7 24 42.0 8.6048 54.2 2.753 1.7 32.2364 2.83 123.3 24 43.0 8.5969 54.0 2.756 1.6 32.2416 2.81 122.6 24 44.0 8.5881 53.9 2.757 1.4 32.2472 2.80 122.1 24 45.0 8.5763 53.7 2.754 1.3 32.2555 2.78 120.9 24 46.0 8.5655 53.6 2.751 1.1 32.2632 2.73 119.1 24 47.0 8.5469 53.3 2.753 1.0 32.2760 2.71 118.2 24 48.0 8.5325 53.1 2.756 0.9 32.2838 2.68 116.8 23 49.0 8.5123 53.0 2.753 0.8 32.2949 2.65 115.3 24 50.0 8.5149 52.6 2.755 0.7 32.2936 2.62 114.0 24 51.0 8.4916 52.7 2.758 0.7 32.3052 2.68 116.9 24 52.0 8.4644 52.7 2.757 0.6 32.3203 2.70 117.6 24 53.0 8.4166 51.8 2.745 0.5 32.3478 2.62 114.0 22