*2016/07/14 15:17:30.20 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/06 15:27:16.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 63 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : D028942E NUMBER OF CHANNELS : 9 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 65 2 Temperature:Primary 'deg C (ITS90)' 8.1849 15.1748 3 Transmissivity %/metre 43.3 61.7 4 Fluorescence:URU:Seapoint mg/m^3 2.483 3.164 5 PAR uE/m^2/sec 0.28E-01 51.937 6 Salinity:T0:C0 PSS-78 14.9543 32.4481 7 Oxygen:Dissolved:SBE mL/L 0.176 10.446 8 Oxygen:Dissolved:SBE umol/kg 7.663702 461.4727 9 Number_of_bin_records n/a 16 64 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-50\Pro $END *ADMINISTRATION MISSION : 2013-50 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : WCVI and Northern Inlet Moorings SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI and Northern Inlets STATION : EF02 EVENT NUMBER : 31 LATITUDE : 49 5.00000 N ! (deg min) LONGITUDE : 125 10.31000 W ! (deg min) WATER DEPTH : 69 ALTIMETER (M) : 4.57 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2668 Conductivity:2 ' ' 2754 Fluorometer:Seapoint ' ' 2228 'Oxygen:SBE 43' ' ' 0997 'Transmissometer:WET Labs C-Star' ' ' 1396 Altimeter ' ' 1204 PAR/Irradiance:Biospherical/Licor ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/01/06 17:13:14 20851 20851 CLEAN 5.1 2014/01/06 17:17:06 20851 20851 SHIFTDAT 3.4 2014/01/14 16:05:37 20851 20851 SHIFTDAT 3.4 2014/01/14 17:37:56 20851 20851 SHIFTDAT 3.4 2014/01/14 17:41:39 20851 20851 DELETE 6.3 2014/01/14 17:44:36 20851 2284 CTDEDIT 5.0.4 2014/01/15 15:42:11 2284 2016 CALIB 11.8 2014/01/16 09:20:27 2016 2016 FILTERS 4.3 2014/01/16 10:00:58 2016 2016 BINAVE 4.1.1 2014/01/16 10:01:19 2016 63 REMOVECH 8.2 2014/01/16 10:59:45 63 63 CHGUNITS 3.1 2014/01/16 11:02:04 63 63 REORDER 1.3 2014/01/16 11:02:58 ? ? HDREDIT2 2.6 2014/01/16 11:11:08 ? ? HDREDIT2 3.0.2 2016/07/14 15:17:30 ? ? $END $REMARKS -CLEAN functions: 2014/01/06 17:14:37 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.40 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 54.92 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/01/15 15:42:11 268 records were deleted in this editing session. 61 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/01/16 09:20:27 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1054500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/01/16 10:59:45 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/01/16 11:11:08 Applied edit header: P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -HEADER EDITS: 2016/07/14 15:17:30 Applied edit header: P:\Cruise_Data_Processing\2013-FL\2013-HDR-FL.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\Data\2013-50\2013-50-0031.hex Software Version Seasave V 7.22.4 Temperature SN = 2023 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 06 2013 08:27:13 NMEA Latitude = 49 05.00 N NMEA Longitude = 125 10.31 W NMEA UTC (Time) = Jul 06 2013 15:27:16 Store Lat/Lon Data = Append to Every Scan Ship: J P Tully Cruise: 2013-50 Depth: 69 Station: EF02 System UTC = Jul 06 2013 15:27:13 # nquan = 17 # nvalues = 20851 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = altM: Altimeter [m] # name 11 = dz/dtM: Descent Rate [m/s] # name 12 = pumps: Pump Status # name 13 = sal00: Salinity, Practical [PSU] # name 14 = sal11: Salinity, Practical, 2 [PSU] # name 15 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 16 = flag: flag # span 0 = 1, 20851 # span 1 = -0.044, 64.918 # span 2 = -72.2813, 99.0000 # span 3 = 8.1780, 19.1720 # span 4 = 0.263617, 3.620038 # span 5 = 0.109796, 3.663255 # span 6 = 12.4031, 93.7483 # span 7 = 1.7582e+00, 3.6264e+00 # span 8 = 0.5153, 4.0049 # span 9 = 2.1028e-02, 3.7890e+02 # span 10 = 0.00, 100.00 # span 11 = -0.841, 1.064 # span 12 = 0, 1 # span 13 = 1.6152, 168.7235 # span 14 = 0.6419, 32.4554 # span 15 = -77.56892, 857.88624 # span 16 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 06 2013 15:27:16 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2023 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.11056177e-003 # 6.24714349e-004 # 1.97891287e-005 # 1.88702998e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00955037e+001 # 1.35324049e+000 # -2.33974617e-003 # 2.26260145e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 23-Mar-13 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99985327 # 3.73990 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2668 # 01-Feb-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35639086e-003 # 6.48643105e-004 # 2.44567925e-005 # 2.40597452e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05984808e+001 # 1.61542018e+000 # -2.38112540e-003 # 2.73092331e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2228 # # # 1 # 0.000 # # # # # # # # # 0997 # 16-Feb-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4081e-001 # -0.4850 # -2.4308e-003 # 1.3327e-004 # -2.5567e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.5900 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1396 # Jan 31st 2013 # 18.8463 # 0.0000 # 0.250 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # # # # 4615 # 16th of March 2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Nov 06 2013 16:54:47, 7.22.5 [datcnv_vars = 13] # datcnv_in = P:\Cruise_Data_Processing\2013-50\RAW\CTD\2013-50-0031.hex P:\Crui se_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 07 2013 08:41:36, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-50\Processing\convert\2013-50-003 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 07 2013 09:19:42, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-50\Processing\wildedit\2013-50-00 31.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Nov 07 2013 09:22:07, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-50\Processing\align\2013-50-0031.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 07 2013 09:24:03, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-50\Processing\celltm\2013-50-0031.c nv P:\Cruise_Data_Processing\2013-50\Processing\doc\2013-50-ctd.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove surface records and records corrupted by shed wakes near the bottom of the cast; salinity was cleaned lightly. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.25 mL/L from 0 to 100db ±0.10 mL/L from 100 to 400db ±0.05 mL/L below 400db The two CTD salinity channels were generally within 0.001 of each other. The comparison with bottles had a lot of scatter, but the average differences showed that both CTD salinity channels were well within 0.001 of bottle values. During a May 2013 cruise with more deep sampling, both salinity channels were found to be within 0.001 of bottle samples. SBE Fluorescence data from this sensor are considered unreliable. Dark values are much higher than expected from this cruise and other cruises in May and June 2013 and appear to be increasing with time. Fluorescence values have also been lower than usual relative to bottles, particularly at higher chlorophyll values. The data are provided since the shape may be useful. For details on the processing see the report: 2013-50-proc.doc. --------------------------------------------------------------------------------- WARNING: SeaPoint Fluorometer #2228 malfunctioned during the latter half of 2013. There were large values at great depth that got steadily higher through the year until it was removed from service. The data have been left in the file so researchers can see the shape of the profile. Comparison with extracted chlorophyll is recommended. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0545) $END !--1--- ---2---- --3-- ---4--- --5--- ---6---- --7--- --8-- -9-- !Pressu Temperat Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 3.0 15.1748 45.4 2.572 51.9 14.9543 10.45 461.5 29 4.0 14.7814 44.2 2.643 39.6 25.4133 8.69 381.0 64 5.0 13.1998 45.9 2.776 30.9 29.9823 8.34 364.3 54 6.0 11.6121 52.9 2.815 24.1 31.0458 8.68 378.7 43 7.0 11.5338 54.2 2.807 19.4 31.0682 8.78 382.9 36 8.0 11.6498 54.0 2.813 15.9 30.9794 8.39 366.1 45 9.0 11.6591 55.0 2.834 13.4 30.9871 7.81 340.7 39 10.0 11.1231 56.7 2.816 11.3 31.3466 7.58 330.4 32 11.0 10.6331 53.1 3.016 9.7 31.4825 7.33 319.6 31 12.0 10.3951 50.9 3.164 8.3 31.4957 6.84 298.2 31 13.0 10.2279 55.4 2.813 7.0 31.5577 6.33 275.9 31 14.0 9.9998 60.0 2.647 5.9 31.6059 6.05 263.6 31 15.0 9.8172 61.5 2.555 5.2 31.6370 5.63 245.5 31 16.0 9.7223 61.5 2.509 4.8 31.6722 5.47 238.4 31 17.0 9.5840 61.2 2.506 4.4 31.7051 5.19 226.2 30 18.0 9.5259 61.6 2.483 4.1 31.7333 4.86 211.7 31 19.0 9.4602 61.7 2.490 3.8 31.7598 4.62 201.3 31 20.0 9.3770 61.2 2.490 3.6 31.7879 4.35 189.6 31 21.0 9.3212 61.2 2.501 3.4 31.8090 4.13 180.1 30 22.0 9.2594 61.1 2.509 3.2 31.8334 3.97 173.1 31 23.0 9.2102 60.6 2.512 3.0 31.8566 3.80 165.5 30 24.0 9.1682 59.6 2.534 2.9 31.8777 3.68 160.4 31 25.0 9.1114 59.9 2.530 2.7 31.9054 3.52 153.2 31 26.0 9.1020 60.0 2.533 2.6 31.9126 3.39 147.5 30 27.0 9.0423 60.0 2.533 2.5 31.9412 3.34 145.6 24 28.0 8.9980 59.4 2.543 2.3 31.9637 3.36 146.4 28 29.0 8.9703 59.0 2.550 2.2 31.9760 3.31 144.2 31 30.0 8.9667 58.4 2.553 2.1 31.9817 3.22 140.1 31 31.0 8.9431 57.5 2.568 1.9 31.9955 3.09 134.5 30 32.0 8.9132 57.5 2.563 1.8 32.0117 2.76 120.3 31 33.0 8.8970 57.5 2.564 1.7 32.0213 2.75 119.6 30 34.0 8.8715 57.8 2.562 1.5 32.0341 2.86 124.7 31 35.0 8.8564 58.9 2.564 1.4 32.0417 2.81 122.3 31 36.0 8.8265 58.2 2.563 1.2 32.0565 2.73 119.1 30 37.0 8.8047 57.7 2.567 1.1 32.0681 2.72 118.3 31 38.0 8.7883 57.9 2.560 1.0 32.0763 2.68 116.8 31 39.0 8.7740 57.8 2.559 0.9 32.0863 2.59 112.7 31 40.0 8.7590 56.8 2.557 0.8 32.0956 2.54 110.7 31 41.0 8.7364 56.7 2.554 0.7 32.1092 2.46 107.2 30 42.0 8.7223 56.9 2.548 0.6 32.1179 2.27 98.9 31 43.0 8.7064 56.9 2.549 0.6 32.1277 2.18 95.1 30 44.0 8.6912 56.6 2.569 0.5 32.1364 2.08 90.4 30 45.0 8.6681 56.8 2.561 0.4 32.1486 2.04 88.9 31 46.0 8.6582 56.6 2.553 0.4 32.1548 1.88 82.0 28 47.0 8.6174 57.3 2.545 0.3 32.1776 1.67 72.9 29 48.0 8.5905 56.9 2.545 0.3 32.1930 1.88 81.8 28 49.0 8.5813 56.9 2.545 0.3 32.2001 1.81 78.8 28 50.0 8.5673 57.8 2.544 0.2 32.2077 1.36 59.5 23 51.0 8.5375 56.9 2.543 0.2 32.2219 0.73 31.6 28 52.0 8.4825 56.4 2.544 0.2 32.2518 0.34 14.9 28 53.0 8.4102 56.9 2.540 0.2 32.2962 0.21 9.3 28 54.0 8.3274 56.0 2.542 0.1 32.3524 0.20 8.8 28 55.0 8.2878 58.6 2.556 0.1 32.3799 0.23 10.0 28 56.0 8.2680 56.4 2.576 0.1 32.3948 0.22 9.5 26 57.0 8.2511 45.4 2.596 0.1 32.4085 0.21 9.3 29 58.0 8.2319 44.1 2.607 0.1 32.4223 0.21 9.0 30 59.0 8.2292 43.3 2.609 0.1 32.4239 0.19 8.4 30 60.0 8.2190 46.5 2.606 0.1 32.4295 0.20 8.7 30 61.0 8.2047 49.8 2.605 0.1 32.4372 0.19 8.3 31 62.0 8.1957 50.6 2.610 0.0 32.4418 0.18 7.9 37 63.0 8.1901 53.0 2.601 0.0 32.4460 0.18 7.7 45 64.0 8.1865 53.8 2.578 0.0 32.4481 0.80 34.9 49 65.0 8.1849 55.8 2.575 0.0 32.4473 1.15 49.9 16