*2017/06/16 17:05:43.48 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2013/09/20 00:39:54.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 74 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 45D5A088 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ----------------------- --------------- -------------- -------------- 1 Pressure decibar 0.378 72.801 2 Temperature:Primary 'deg C (ITS90)' 9.0454 17.1144 3 pH:SBE:Nominal n/a 8.248 8.886 4 Salinity:T0:C0 PSS-78 23.8396 30.0568 5 Oxygen:Dissolved:SBE mL/L 2.894 5.808 6 Oxygen:Dissolved:SBE umol/kg 126.2616 254.4665 7 Number_of_bin_records n/a 5 24 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-47\Pro $END *ADMINISTRATION MISSION : 2013-47 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS05 EVENT NUMBER : 9 LATITUDE : 49 52.40000 N ! (deg min) LONGITUDE : 124 36.10000 W ! (deg min) WATER DEPTH : 95 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 3184 'Pressure:Strain Gauge' ' ' 0573 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1119 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2017/06/14 15:04:14 3709 3709 CLEAN 5.2.2 2017/06/14 15:04:36 3709 3709 MERGEHDR 1.3 2017/06/15 09:04:46 3709 3709 ADTIMCH 4.4 2017/06/15 09:04:55 3709 3709 SHIFTDAT 3.4 2017/06/15 13:08:14 3709 3709 SHIFTDAT 3.4 2017/06/15 13:35:29 3709 3709 CLEAN 5.2.2 2017/06/15 14:48:57 3709 3709 CLEAN 5.2.2 2017/06/15 14:49:16 3709 3709 DELETE 6.3 2017/06/15 14:49:27 3709 863 CTDEDIT 5.2.3 2017/06/15 15:44:58 863 833 CALIB 11.9 2017/06/16 16:30:44 833 833 BINAVE 4.2 2017/06/16 16:30:50 833 74 REMOVECH 8.2 2017/06/16 16:33:07 74 74 CHGUNITS 3.1.1 2017/06/16 16:33:16 74 74 REORDER 1.3.1 2017/06/16 17:04:35 ? ? HDREDIT2 3.1.1 2017/06/16 17:05:43 ? ? $END $REMARKS -CLEAN functions: 2017/06/14 15:04:35 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name Set header Start and End times from the data. *FAILED* -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 8.00 -CLEAN functions: 2017/06/15 14:48:55 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: pH:SBE [pH Units] where channel pH:SBE [pH Units] is in the range -1000 to 0 6276 data records in pad range. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2017/06/15 14:49:14 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel pH:SBE [pH Units] is in the range -1000 to 0 6276 data records in pad range. Set header Start and End times from the data. *FAILED* -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 63.17 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2017/06/15 15:44:58 30 records were deleted in this editing session. 4 changes in channel Salinity:T0:C0 -CALIB parameters: 2017/06/16 16:30:43 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T0:C0 PSS-78 10 0.5000000E-02 0.1000000E+01 9 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1180000E+01 -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2017/06/16 16:33:07 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2017/06/16 17:05:43 Applied edit header: P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 3: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\Current Data\2013-47\2013-47-00 01008.hex Software Version 1.59 Temperature SN = 4484 Conductivity SN = 3184 System UpLoad Time = Sep 24 2013 19:04:29 2013-47 SOG-2013-07 GS05 95m ds SBE 25 CTD V 4.1c SN 0404 09/24/13 18:49:19.037 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.985 vmain = 10.0 iop = 190 vlith = 5.3 ncasts = 21 samples = 302239 free = 460002 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 3000 pump delay = 45 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 4 stored voltage # 1 = external voltage 5 S> dh cast 8 09/19 17:39:54 smpls 37516 to 41224 nv = 2 avg = 1 stp = switch of S> # nquan = 10 # nvalues = 3709 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = sbeox0V: Oxygen raw, SBE 43 [V] # name 5 = ph: pH # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity, Practical [PSU] # name 8 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 9 = flag: flag # span 0 = 1, 3709 # span 1 = -0.094, 73.167 # span 2 = 9.0427, 19.2981 # span 3 = -0.012494, 3.445869 # span 4 = 0.0000, 2.5140 # span 5 = -2.505, 8.907 # span 6 = -0.994, 1.063 # span 7 = 0.0000, 30.0559 # span 8 = -6.6194, 9.9848 # span 9 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Sep 19 2013 17:39:54 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 4484 # 27-Mar-12 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39927478e-003 # 6.40237498e-004 # 2.13708788e-005 # 1.80396545e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3184 # 21-Mar-12 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02203365e+001 # 1.42981964e+000 # -2.27200653e-004 # 9.38032659e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0573 # 01-Mar-12 # 9.200504e+002 # -2.513562e-001 # -2.051144e-008 # 0.20000 # # # # # # 0852 # 21-apr-11 # 4.6009 # 2.5060 # # # # # # 1119 # 29-Mar-11 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # datcnv_date = Jun 14 2017 13:20:52, 7.23.2 [datcnv_vars = 7] # datcnv_in = P:\Cruise_Data_Processing\2013-47\RAW\CTD\2013-47-0009.hex P:\Crui se_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Jun 14 2017 14:34:23, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2013-47\Processing\convert\2013-47-0009 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Jun 14 2017 14:50:14, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2013-47\Processing\wfilter\2013-47-000 9.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jun 14 2017 14:50:46, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2013-47\Processing\align\2013-47-0009.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jun 14 2017 14:51:02, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2013-47\Processing\celltm\2013-47-0009.c nv P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the top of the cast and records corrupted by shed wakes near the bottom of the cast; salinity was cleaned lightly.. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Oxygen:Dissolved:SBE and pH:SBE channels are nominal and unedited except that some records were removed in editing temperature and salinity. There was no salinity, pH or dissolved oxygen calibration sampling. Recalibration was based on post-cruise factory calibrations. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data are available. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-47-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.5E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.18) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat pH:SBE: Salinity Oxygen Oxyge Numb !re ure: Nominal :T0:C0 : n: er_o ! Primary Dissol Disso ~bin ! ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 0.4 17.1144 -99.000 23.8396 -99.00 -99.0 5 1.0 16.9270 -99.000 24.7984 -99.00 -99.0 24 2.0 16.7703 -99.000 25.5094 -99.00 -99.0 20 3.1 16.6570 -99.000 26.0162 -99.00 -99.0 16 3.9 16.5885 8.886 26.1518 5.80 254.3 11 4.9 16.5517 8.886 26.2853 5.81 254.5 19 6.0 16.5343 8.886 26.3193 5.80 254.0 16 7.0 16.5108 8.882 26.3432 5.78 253.0 14 8.0 16.4671 8.880 26.3854 5.76 252.4 13 9.0 16.4363 8.877 26.4156 5.75 251.7 14 10.0 16.4275 8.873 26.4250 5.75 252.1 13 11.0 16.4258 8.872 26.4280 5.75 252.0 12 12.0 16.4235 8.872 26.4314 5.75 252.1 13 13.0 16.4207 8.872 26.4352 5.72 250.4 12 14.0 16.3411 8.868 26.4950 5.59 244.8 11 15.0 15.7933 8.842 26.8529 5.47 239.7 11 16.0 15.4484 8.807 27.0607 5.33 233.4 12 17.0 15.0224 8.772 27.3078 5.03 220.0 12 18.0 13.9472 8.702 27.7795 4.74 207.3 11 19.0 13.5990 8.639 27.8514 4.57 200.0 12 20.0 13.4529 8.602 27.8808 4.35 190.1 12 21.0 12.7415 8.556 28.0810 4.10 179.2 11 22.0 12.3384 8.513 28.2299 3.88 169.6 11 23.0 11.7190 8.475 28.3636 3.71 161.9 10 24.0 11.0664 8.434 28.5317 3.55 155.2 11 25.0 10.6618 8.395 28.6481 3.44 150.4 11 26.0 10.4146 8.363 28.7342 3.39 148.0 11 27.0 10.3556 8.340 28.7606 3.35 146.3 12 28.0 10.3226 8.326 28.7808 3.32 145.0 10 29.0 10.2434 8.315 28.8255 3.28 143.4 11 30.0 10.1584 8.307 28.8852 3.23 141.1 10 31.0 10.0156 8.299 28.9725 3.18 139.0 10 32.0 9.9147 8.291 29.0445 3.13 136.6 10 33.0 9.7161 8.281 29.1692 3.08 134.5 11 34.0 9.5986 8.274 29.2421 3.04 132.9 9 35.0 9.5003 8.266 29.3224 3.02 131.8 11 36.0 9.4868 8.262 29.3655 3.00 131.0 10 37.0 9.4742 8.257 29.3946 2.99 130.6 10 38.0 9.4413 8.255 29.4367 2.99 130.6 10 39.0 9.4227 8.255 29.4689 2.98 130.2 9 40.0 9.3578 8.253 29.5139 2.97 129.6 9 41.0 9.3057 8.250 29.5671 2.96 129.3 10 42.0 9.2762 8.252 29.5968 2.96 129.4 9 42.9 9.2534 8.250 29.6210 2.96 129.4 10 44.0 9.2542 8.248 29.6377 2.96 129.4 11 45.0 9.2494 8.248 29.6508 2.97 129.4 10 46.0 9.2487 8.248 29.6590 2.97 129.5 9 47.0 9.2368 8.250 29.6868 2.97 129.6 10 48.0 9.2218 8.253 29.7072 2.96 129.4 9 49.0 9.2070 8.252 29.7325 2.96 129.2 11 50.0 9.2033 8.252 29.7452 2.96 129.2 9 51.0 9.1960 8.252 29.7620 2.96 129.2 10 52.0 9.1828 8.252 29.7873 2.96 129.1 10 53.0 9.1754 8.252 29.8072 2.95 128.9 11 54.0 9.1587 8.253 29.8448 2.95 128.8 10 55.0 9.1442 8.254 29.8853 2.95 128.6 10 56.0 9.1345 8.254 29.9000 2.95 128.8 10 57.0 9.1235 8.256 29.9083 2.95 128.9 10 58.0 9.1223 8.258 29.9205 2.96 129.1 9 59.0 9.1173 8.258 29.9320 2.96 129.1 10 60.0 9.1097 8.259 29.9462 2.96 129.1 9 61.0 9.1162 8.262 29.9582 2.96 129.2 11 61.9 9.1121 8.263 29.9779 2.96 129.1 11 63.0 9.1046 8.263 29.9901 2.95 128.8 10 64.0 9.0938 8.263 30.0102 2.94 128.3 10 64.9 9.0863 8.263 30.0195 2.94 128.1 9 65.9 9.0787 8.261 30.0315 2.93 127.7 10 67.0 9.0738 8.261 30.0401 2.92 127.6 11 68.0 9.0692 8.260 30.0456 2.92 127.4 9 68.9 9.0688 8.259 30.0455 2.92 127.4 10 70.0 9.0666 8.259 30.0463 2.91 127.1 10 71.0 9.0606 8.257 30.0461 2.91 127.0 13 72.0 9.0560 8.257 30.0467 2.91 126.8 12 72.8 9.0454 8.254 30.0568 2.89 126.3 11