*2017/06/16 17:05:43.26 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2013/09/19 01:27:16.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 78 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 92BC828D NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ----------------------- --------------- -------------- -------------- 1 Pressure decibar 0.426 77.637 2 Temperature:Primary 'deg C (ITS90)' 9.35 16.9937 3 pH:SBE:Nominal n/a 8.061 8.251 4 Salinity:T0:C0 PSS-78 24.4126 30.3724 5 Oxygen:Dissolved:SBE mL/L 2.631 3.811 6 Oxygen:Dissolved:SBE umol/kg 114.7682 166.5803 7 Number_of_bin_records n/a 2 23 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-47\Pro $END *ADMINISTRATION MISSION : 2013-47 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS02 EVENT NUMBER : 3 LATITUDE : 49 29.40000 N ! (deg min) LONGITUDE : 124 1.50000 W ! (deg min) WATER DEPTH : 90 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 3184 'Pressure:Strain Gauge' ' ' 0573 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1119 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2017/06/14 15:04:12 3477 3477 CLEAN 5.2.2 2017/06/14 15:04:35 3477 3477 MERGEHDR 1.3 2017/06/15 09:04:45 3477 3477 ADTIMCH 4.4 2017/06/15 09:04:54 3477 3477 SHIFTDAT 3.4 2017/06/15 13:08:13 3477 3477 SHIFTDAT 3.4 2017/06/15 13:35:28 3477 3477 CLEAN 5.2.2 2017/06/15 14:48:55 3477 3477 CLEAN 5.2.2 2017/06/15 14:49:15 3477 3477 DELETE 6.3 2017/06/15 14:49:26 3477 1022 CTDEDIT 5.2.3 2017/06/15 15:00:38 1022 972 CTDEDIT 5.2.3 2017/06/15 15:01:42 972 972 CALIB 11.9 2017/06/16 16:30:43 972 972 BINAVE 4.2 2017/06/16 16:30:50 972 78 REMOVECH 8.2 2017/06/16 16:33:07 78 78 CHGUNITS 3.1.1 2017/06/16 16:33:16 78 78 REORDER 1.3.1 2017/06/16 17:04:35 ? ? HDREDIT2 3.1.1 2017/06/16 17:05:43 ? ? $END $REMARKS -CLEAN functions: 2017/06/14 15:04:35 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name Set header Start and End times from the data. *FAILED* -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 8.00 -CLEAN functions: 2017/06/15 14:48:55 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: pH:SBE [pH Units] where channel pH:SBE [pH Units] is in the range -1000 to 0 2789 data records in pad range. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2017/06/15 14:49:14 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel pH:SBE [pH Units] is in the range -1000 to 0 2789 data records in pad range. Set header Start and End times from the data. *FAILED* -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 67.79 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2017/06/15 15:00:38 50 records were deleted in this editing session. No data values were changed. -CTDEDIT v5.2.3 2017/06/15 15:01:42 35 changes in channel pH:SBE -CALIB parameters: 2017/06/16 16:30:43 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T0:C0 PSS-78 10 0.5000000E-02 0.1000000E+01 9 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1180000E+01 -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2017/06/16 16:33:07 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2017/06/16 17:05:43 Applied edit header: P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 3: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\Current Data\2013-47\2013-47-00 01005.hex Software Version 1.59 Temperature SN = 4484 Conductivity SN = 3184 System UpLoad Time = Sep 24 2013 21:34:29 2013-47 SOG-2013-07 GS02 90m ds SBE 25 CTD V 4.1c SN 0404 09/24/13 21:30:52.379 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.995 vmain = 10.0 iop = 190 vlith = 5.3 ncasts = 21 samples = 302239 free = 460002 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 3000 pump delay = 45 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 4 stored voltage # 1 = external voltage 5 S> dh cast 5 09/18 18:27:16 smpls 21331 to 24807 nv = 2 avg = 1 stp = switch of S> # nquan = 10 # nvalues = 3477 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = sbeox0V: Oxygen raw, SBE 43 [V] # name 5 = ph: pH # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity, Practical [PSU] # name 8 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 9 = flag: flag # span 0 = 1, 3477 # span 1 = -0.054, 77.786 # span 2 = 9.3495, 17.0551 # span 3 = 0.007895, 3.465028 # span 4 = 0.0000, 2.4139 # span 5 = -2.604, 8.631 # span 6 = -0.994, 0.902 # span 7 = 0.0482, 30.3696 # span 8 = -7.5000, 8.4786 # span 9 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Sep 18 2013 18:27:16 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 4484 # 27-Mar-12 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39927478e-003 # 6.40237498e-004 # 2.13708788e-005 # 1.80396545e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3184 # 21-Mar-12 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02203365e+001 # 1.42981964e+000 # -2.27200653e-004 # 9.38032659e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0573 # 01-Mar-12 # 9.200504e+002 # -2.513562e-001 # -2.051144e-008 # 0.20000 # # # # # # 0852 # 21-apr-11 # 4.6009 # 2.5060 # # # # # # 1119 # 29-Mar-11 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # datcnv_date = Jun 14 2017 13:20:50, 7.23.2 [datcnv_vars = 7] # datcnv_in = P:\Cruise_Data_Processing\2013-47\RAW\CTD\2013-47-0003.hex P:\Crui se_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Jun 14 2017 14:34:23, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2013-47\Processing\convert\2013-47-0003 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Jun 14 2017 14:50:13, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2013-47\Processing\wfilter\2013-47-000 3.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jun 14 2017 14:50:45, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2013-47\Processing\align\2013-47-0003.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jun 14 2017 14:51:01, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2013-47\Processing\celltm\2013-47-0003.c nv P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the top of the cast and records corrupted by shed wakes near the bottom of the cast. CTDEDIT was run a second time to remove a few bad values in channel pH:SBE around 10m. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Oxygen:Dissolved:SBE and pH:SBE channels are nominal and unedited except that some records were removed in editing temperature and salinity. There was no salinity, pH or dissolved oxygen calibration sampling. Recalibration was based on post-cruise factory calibrations. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data are available. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-47-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.5E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.18) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat pH:SBE: Salinity Oxygen Oxyge Numb !re ure: Nominal :T0:C0 : n: er_o ! Primary Dissol Disso ~bin ! ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 0.4 16.9911 -99.000 24.4126 -99.00 -99.0 2 0.9 16.9937 -99.000 24.7598 -99.00 -99.0 16 3.0 16.9677 -99.000 24.9421 -99.00 -99.0 23 3.9 16.9330 -99.000 24.9736 -99.00 -99.0 16 5.0 16.6821 -99.000 25.4139 -99.00 -99.0 19 6.0 15.8875 -99.000 26.8771 -99.00 -99.0 16 7.0 13.9734 -99.000 27.8998 -99.00 -99.0 18 8.0 13.0502 -99.000 28.2289 -99.00 -99.0 18 9.0 12.9503 -99.000 28.2619 -99.00 -99.0 17 10.0 12.6459 -99.000 28.3747 3.81 166.6 15 11.0 12.1555 8.251 28.5092 3.65 159.5 14 12.0 11.8960 8.227 28.6288 3.56 155.6 16 13.0 11.6910 8.202 28.6940 3.49 152.3 16 14.0 11.5700 8.184 28.7351 3.42 149.6 14 14.9 11.4144 8.168 28.7599 3.38 147.4 13 16.0 11.3687 8.155 28.7856 3.35 146.3 15 17.0 11.2670 8.145 28.8442 3.30 144.0 13 18.0 11.0788 8.133 28.8929 3.24 141.4 14 19.0 10.8684 8.121 28.9191 3.17 138.5 15 20.0 10.7349 8.104 28.9786 3.14 137.0 13 21.0 10.7323 8.095 28.9922 3.12 136.2 12 22.0 10.6825 8.088 29.0430 3.09 134.9 12 23.0 10.5241 8.080 29.0935 3.06 133.6 12 24.0 10.4961 8.072 29.1111 3.05 133.1 13 25.0 10.4644 8.066 29.1499 3.04 132.6 12 26.0 10.4370 8.063 29.1859 3.02 132.1 13 27.0 10.4290 8.061 29.2274 3.00 131.2 12 28.0 10.3026 8.066 29.2353 2.98 130.1 12 29.0 10.1660 8.085 29.2704 2.96 129.4 12 30.0 10.1194 8.092 29.3422 2.95 128.9 11 31.0 10.0426 8.100 29.4058 2.95 128.8 11 32.0 10.0349 8.105 29.4101 2.94 128.3 12 33.0 10.0300 8.114 29.4133 2.94 128.1 10 34.0 9.9976 8.124 29.4371 2.93 127.9 12 35.0 9.9515 8.125 29.4690 2.92 127.5 11 36.0 9.8897 8.129 29.5079 2.92 127.3 10 37.0 9.8618 8.129 29.5264 2.91 127.0 12 38.0 9.8268 8.128 29.5525 2.90 126.6 9 39.0 9.7889 8.128 29.5777 2.88 125.6 11 40.0 9.6882 8.124 29.6322 2.86 124.8 10 41.0 9.5483 8.121 29.7278 2.85 124.2 11 42.0 9.4875 8.120 29.7511 2.84 124.1 11 43.0 9.4802 8.116 29.7529 2.84 124.0 11 44.0 9.4763 8.115 29.7555 2.84 123.9 11 45.1 9.4684 8.113 29.7597 2.83 123.7 11 46.0 9.4010 8.114 29.8340 2.83 123.4 11 47.0 9.3688 8.115 29.8757 2.82 123.0 9 48.0 9.3676 8.118 29.8823 2.82 123.0 11 49.0 9.3690 8.122 29.9066 2.81 122.6 10 50.0 9.3960 8.125 29.9328 2.80 122.3 11 51.0 9.3872 8.127 29.9443 2.79 121.9 13 52.0 9.3747 8.129 29.9580 2.79 121.7 11 53.0 9.3715 8.130 29.9619 2.79 121.7 11 54.0 9.3696 8.128 29.9666 2.78 121.5 10 54.9 9.3658 8.129 29.9821 2.78 121.4 11 56.0 9.3644 8.126 29.9957 2.78 121.4 11 57.0 9.3589 8.125 30.0039 2.78 121.3 11 58.0 9.3512 8.125 30.0133 2.77 120.9 11 59.0 9.3500 8.125 30.0208 2.77 120.7 11 60.0 9.3510 8.122 30.0256 2.77 120.7 12 61.0 9.3585 8.120 30.0453 2.76 120.6 12 62.0 9.3626 8.120 30.0774 2.76 120.4 11 63.0 9.3649 8.120 30.1025 2.76 120.3 11 64.0 9.3701 8.120 30.1169 2.75 120.1 10 65.0 9.3738 8.120 30.1276 2.74 119.7 11 66.0 9.3769 8.120 30.1370 2.75 119.8 11 67.0 9.3768 8.120 30.1516 2.74 119.7 12 68.0 9.3781 8.120 30.1575 2.74 119.5 10 69.0 9.3863 8.120 30.1669 2.74 119.4 14 70.0 9.3870 8.120 30.1770 2.73 119.2 11 71.0 9.3838 8.119 30.2152 2.72 118.5 16 72.0 9.4002 8.115 30.2448 2.71 118.0 13 73.0 9.4095 8.115 30.2528 2.70 117.8 14 74.0 9.4434 8.115 30.2889 2.69 117.3 16 75.0 9.5226 8.115 30.3523 2.65 115.7 15 76.0 9.5550 8.116 30.3724 2.63 114.9 14 77.0 9.5437 8.116 30.3713 2.63 114.9 14 77.6 9.5367 8.117 30.3705 2.63 114.8 5