*2017/06/16 17:05:43.15 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2013/09/18 18:54:45.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 79 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 469E0969 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ----------------------- --------------- -------------- -------------- 1 Pressure decibar 0.447 77.589 2 Temperature:Primary 'deg C (ITS90)' 9.3902 16.1522 3 pH:SBE:Nominal n/a 7.962 8.476 4 Salinity:T0:C0 PSS-78 23.6449 30.415 5 Oxygen:Dissolved:SBE mL/L 2.515 4.896 6 Oxygen:Dissolved:SBE umol/kg 109.7073 214.6386 7 Number_of_bin_records n/a 3 20 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-47\Pro $END *ADMINISTRATION MISSION : 2013-47 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS01 EVENT NUMBER : 1 LATITUDE : 49 24.86000 N ! (deg min) LONGITUDE : 123 47.49000 W ! (deg min) WATER DEPTH : 110 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 3184 'Pressure:Strain Gauge' ' ' 0573 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1119 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2017/06/14 15:04:12 3875 3875 CLEAN 5.2.2 2017/06/14 15:04:35 3875 3875 MERGEHDR 1.3 2017/06/15 09:04:45 3875 3875 ADTIMCH 4.4 2017/06/15 09:04:53 3875 3875 SHIFTDAT 3.4 2017/06/15 13:08:13 3875 3875 SHIFTDAT 3.4 2017/06/15 13:35:28 3875 3875 CLEAN 5.2.2 2017/06/15 14:48:55 3875 3875 CLEAN 5.2.2 2017/06/15 14:49:14 3875 3875 DELETE 6.3 2017/06/15 14:49:26 3875 1219 CTDEDIT 5.2.3 2017/06/15 14:57:06 1219 1166 CALIB 11.9 2017/06/16 16:30:43 1166 1166 BINAVE 4.2 2017/06/16 16:30:49 1166 79 REMOVECH 8.2 2017/06/16 16:33:07 79 79 CHGUNITS 3.1.1 2017/06/16 16:33:16 79 79 REORDER 1.3.1 2017/06/16 17:04:35 ? ? HDREDIT2 3.1.1 2017/06/16 17:05:43 ? ? $END $REMARKS -CLEAN functions: 2017/06/14 15:04:35 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name Set header Start and End times from the data. *FAILED* -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 8.00 -CLEAN functions: 2017/06/15 14:48:55 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: pH:SBE [pH Units] where channel pH:SBE [pH Units] is in the range -1000 to 0 1160 data records in pad range. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2017/06/15 14:49:14 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel pH:SBE [pH Units] is in the range -1000 to 0 1160 data records in pad range. Set header Start and End times from the data. *FAILED* -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 67.68 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2017/06/15 14:57:06 53 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2017/06/16 16:30:43 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T0:C0 PSS-78 10 0.5000000E-02 0.1000000E+01 9 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1180000E+01 -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2017/06/16 16:33:07 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2017/06/16 17:05:43 Applied edit header: P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 3: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\Current Data\2013-47\2013-47-00 01004.hex Software Version 1.59 Temperature SN = 4484 Conductivity SN = 3184 System UpLoad Time = Sep 24 2013 21:32:06 2013-47 SOG-2013-07 GS01 110m ds SBE 25 CTD V 4.1c SN 0404 09/24/13 21:30:52.379 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.995 vmain = 10.0 iop = 190 vlith = 5.3 ncasts = 21 samples = 302239 free = 460002 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 3000 pump delay = 45 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 4 stored voltage # 1 = external voltage 5 S> dh cast 4 09/18 11:54:45 smpls 17456 to 21330 nv = 2 avg = 1 stp = switch of S> # nquan = 10 # nvalues = 3875 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = sbeox0V: Oxygen raw, SBE 43 [V] # name 5 = ph: pH # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity, Practical [PSU] # name 8 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 9 = flag: flag # span 0 = 1, 3875 # span 1 = -0.007, 77.676 # span 2 = 9.3894, 16.3182 # span 3 = -0.007426, 3.404964 # span 4 = 0.0000, 2.3724 # span 5 = -2.545, 8.580 # span 6 = -0.786, 0.763 # span 7 = 0.0000, 30.4116 # span 8 = -7.5959, 8.8731 # span 9 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Sep 18 2013 11:54:45 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 4484 # 27-Mar-12 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39927478e-003 # 6.40237498e-004 # 2.13708788e-005 # 1.80396545e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3184 # 21-Mar-12 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02203365e+001 # 1.42981964e+000 # -2.27200653e-004 # 9.38032659e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0573 # 01-Mar-12 # 9.200504e+002 # -2.513562e-001 # -2.051144e-008 # 0.20000 # # # # # # 0852 # 21-apr-11 # 4.6009 # 2.5060 # # # # # # 1119 # 29-Mar-11 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # datcnv_date = Jun 14 2017 13:20:49, 7.23.2 [datcnv_vars = 7] # datcnv_in = P:\Cruise_Data_Processing\2013-47\RAW\CTD\2013-47-0001.hex P:\Crui se_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Jun 14 2017 14:34:23, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2013-47\Processing\convert\2013-47-0001 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Jun 14 2017 14:50:13, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2013-47\Processing\wfilter\2013-47-000 1.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jun 14 2017 14:50:45, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2013-47\Processing\align\2013-47-0001.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jun 14 2017 14:51:01, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2013-47\Processing\celltm\2013-47-0001.c nv P:\Cruise_Data_Processing\2013-47\Processing\doc\2013-47-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the top of the cast and records corrupted by shed wakes near the bottom of the cast. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Oxygen:Dissolved:SBE and pH:SBE channels are nominal and unedited except that some records were removed in editing temperature and salinity. There was no salinity, pH or dissolved oxygen calibration sampling. Recalibration was based on post-cruise factory calibrations. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data are available. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-47-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.5E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.18) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat pH:SBE: Salinity Oxygen Oxyge Numb !re ure: Nominal :T0:C0 : n: er_o ! Primary Dissol Disso ~bin ! ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 0.4 16.1522 -99.000 23.6449 -99.00 -99.0 3 1.0 16.0530 -99.000 24.4796 -99.00 -99.0 20 1.9 15.7483 8.476 25.2577 4.90 214.6 9 3.0 15.4424 8.472 25.7802 4.88 214.1 19 4.0 15.1362 8.453 26.2443 4.90 214.5 18 5.0 14.8072 8.432 26.7712 4.73 206.9 19 6.0 13.4265 8.366 27.9957 4.24 185.5 16 7.0 12.8988 8.284 28.2408 3.95 172.7 19 8.0 12.6672 8.233 28.3607 3.79 165.7 18 9.0 12.4642 8.195 28.4295 3.71 162.0 17 10.0 12.3514 8.171 28.4966 3.64 159.2 17 11.0 12.0884 8.151 28.6010 3.53 154.3 17 12.0 11.9667 8.129 28.6394 3.43 150.1 18 13.0 11.8623 8.111 28.6706 3.37 147.1 17 14.0 11.5987 8.095 28.7570 3.26 142.4 18 15.0 11.4132 8.076 28.8205 3.19 139.2 17 16.0 11.1987 8.055 28.9054 3.13 136.9 17 17.0 11.0561 8.037 28.9588 3.10 135.3 15 18.0 10.9902 8.026 28.9770 3.06 133.7 18 19.0 10.9421 8.019 29.0191 3.03 132.2 17 20.0 10.8389 8.010 29.0740 3.00 131.2 16 21.0 10.6919 8.006 29.1407 2.97 129.8 16 22.0 10.5745 7.998 29.1989 2.95 128.9 15 23.0 10.4516 7.989 29.2633 2.92 127.4 17 24.0 10.3737 7.982 29.2988 2.90 126.8 15 25.0 10.3252 7.975 29.3240 2.88 125.8 14 26.0 10.2171 7.969 29.3702 2.86 124.7 15 27.0 10.1398 7.962 29.4153 2.84 124.0 14 28.0 10.0881 8.023 29.4435 2.83 123.4 18 29.0 10.0445 8.087 29.4697 2.81 122.6 16 30.0 9.9975 8.126 29.4940 2.80 122.1 16 31.0 9.9894 8.145 29.4985 2.79 121.9 15 32.0 9.9366 8.162 29.5173 2.78 121.3 15 33.0 9.8665 8.170 29.5451 2.77 120.9 13 34.0 9.8436 8.167 29.5600 2.76 120.4 15 35.0 9.8187 8.158 29.5775 2.75 119.9 17 36.0 9.7901 8.148 29.5955 2.73 119.3 15 37.0 9.7427 8.154 29.6216 2.71 118.5 14 38.0 9.6289 8.165 29.6738 2.71 118.4 15 39.0 9.5636 8.168 29.6939 2.73 119.2 15 40.0 9.4906 8.162 29.7273 2.75 120.0 14 41.0 9.4728 8.158 29.7466 2.75 119.9 16 42.0 9.4590 8.154 29.7608 2.75 119.9 14 43.0 9.4477 8.152 29.7776 2.74 119.5 15 44.0 9.4372 8.153 29.7918 2.74 119.4 13 45.0 9.4308 8.155 29.7995 2.73 119.3 14 46.0 9.4183 8.158 29.8173 2.73 119.3 14 47.0 9.4076 8.158 29.8467 2.72 118.8 13 48.0 9.3982 8.157 29.8636 2.72 118.6 16 49.0 9.3912 8.157 29.8795 2.71 118.3 14 50.0 9.3902 8.158 29.8842 2.71 118.2 13 51.0 9.4032 8.158 29.9005 2.71 118.2 14 52.0 9.4090 8.158 29.9076 2.70 118.0 14 53.0 9.4160 8.158 29.9390 2.69 117.6 14 54.0 9.4301 8.158 30.0267 2.68 117.0 14 55.0 9.4328 8.158 30.0330 2.67 116.7 16 56.0 9.4674 8.159 30.0529 2.67 116.6 13 57.0 9.5419 8.161 30.0992 2.66 116.1 14 58.0 9.5737 8.166 30.1210 2.65 115.6 12 59.0 9.5817 8.167 30.1280 2.65 115.4 13 60.0 9.5948 8.169 30.1426 2.64 115.1 16 61.0 9.6098 8.171 30.1695 2.63 114.9 15 62.0 9.6155 8.171 30.1973 2.62 114.4 13 63.0 9.6106 8.171 30.2236 2.61 113.9 15 64.0 9.6052 8.170 30.2311 2.60 113.2 13 65.0 9.6073 8.170 30.2429 2.60 113.3 13 66.0 9.6384 8.170 30.2708 2.59 113.0 14 67.0 9.6554 8.168 30.3093 2.58 112.6 15 68.0 9.6783 8.169 30.3426 2.57 111.9 13 69.0 9.6811 8.169 30.3471 2.56 111.6 13 70.0 9.6830 8.168 30.3498 2.56 111.5 13 71.0 9.6837 8.166 30.3739 2.54 110.9 15 72.0 9.6755 8.166 30.3959 2.53 110.4 14 73.0 9.6846 8.166 30.4010 2.53 110.2 15 73.9 9.6912 8.165 30.4037 2.52 110.1 11 75.4 9.6983 8.166 30.4055 2.52 110.0 4 75.9 9.7021 8.165 30.4069 2.52 109.8 9 77.0 9.7067 8.166 30.4096 2.52 109.8 18 77.6 9.7099 8.166 30.4150 2.52 109.7 6