*2014/04/24 09:07:27.81 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/18 18:57:07.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 60 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : D22B3A6F NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 62 2 Temperature:Primary 'deg C (ITS90)' 7.284 13.7069 3 Fluorescence:URU:Wetlabs mg/m^3 0.199 4.076 4 pH:SBE:Nominal n/a 8.823 9.299 5 Salinity:T0:C0 PSS-78 31.2329 32.9196 6 Oxygen:Dissolved:SBE mL/L 3.477 6.56 7 Oxygen:Dissolved:SBE umol/kg 151.3319 286.1765 8 Number_of_bin_records n/a 6 57 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : T05 EVENT NUMBER : 289 LATITUDE : 51 1.38000 N ! (deg min) LONGITUDE : 128 53.45000 W ! (deg min) WATER DEPTH : 67 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:50:22 4716 4716 CLEAN 5.1 2014/04/16 10:55:43 4716 4716 MERGEHDR 1.2 2014/04/16 14:31:47 4716 4716 SHIFTDAT 3.4 2014/04/16 16:45:01 4716 4716 SHIFTDAT 3.4 2014/04/16 17:29:04 4716 4716 SHIFTDAT 3.4 2014/04/17 09:42:42 4716 4716 DELETE 6.3 2014/04/17 10:07:51 4716 1609 CTDEDIT 5.0.4 2014/04/23 13:48:45 1609 1535 CALIB 11.8 2014/04/23 16:41:13 1535 1535 FILTERS 4.3 2014/04/23 17:28:13 1535 1535 BINAVE 4.1.1 2014/04/23 17:29:09 1535 60 REMOVECH 8.2 2014/04/23 17:30:26 60 60 CHGUNITS 3.1 2014/04/23 17:44:49 60 60 REORDER 1.3 2014/04/23 17:45:04 ? ? HDREDIT2 2.6 2014/04/24 09:07:27 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 52.76 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/23 13:48:45 74 records were deleted in this editing session. 21 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:13 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:26 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 09:07:27 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0289.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 18 2013 11:57:07 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: T05 Depth(m): 67m System UTC = Jul 18 2013 18:57:07 # nquan = 15 # nvalues = 4716 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 4716 # span 1 = 2.214, 62.759 # span 2 = 7.2634, 13.7310 # span 3 = 7.1740, 13.6411 # span 4 = 3.365746, 3.763842 # span 5 = 3.365756, 3.764242 # span 6 = -0.0162, 5.3489 # span 7 = 1.5554, 2.7900 # span 8 = 8.811, 9.308 # span 9 = 0, 1 # span 10 = 31.2148, 32.9298 # span 11 = 31.2776, 33.0159 # span 12 = 3.19004, 6.13634 # span 13 = -1.290, 1.318 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 18 2013 18:57:07 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:16, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0289.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:11:01, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-028 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:38, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 89.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:54, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0289.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:19, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0289.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titirated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 13.6763 3.375 9.299 31.2339 6.56 286.2 8 4.0 13.7069 3.243 9.299 31.2329 6.37 277.9 6 5.0 13.6700 3.764 9.299 31.2350 6.21 271.0 22 6.0 13.6103 4.076 9.299 31.2429 6.06 264.5 25 7.0 13.3069 3.915 9.299 31.2767 5.99 261.3 15 8.0 12.8846 3.381 9.287 31.3483 5.98 260.8 23 9.0 12.5341 2.880 9.265 31.3956 5.95 259.3 23 10.0 12.1000 2.524 9.241 31.4753 5.83 254.2 27 11.0 12.0673 2.531 9.219 31.4830 5.69 248.0 24 12.0 11.9777 2.337 9.212 31.5017 5.59 243.7 23 13.0 11.4294 2.038 9.207 31.5924 5.55 242.2 23 14.0 11.1564 1.824 9.184 31.6620 5.50 239.9 27 15.0 11.0142 1.729 9.161 31.7011 5.39 234.9 27 16.0 10.8886 1.595 9.147 31.7344 5.22 227.5 27 17.0 10.6875 1.397 9.136 31.7789 5.06 220.4 26 18.0 10.4748 1.191 9.124 31.8235 4.93 214.9 22 19.0 10.1852 0.993 9.112 31.8793 4.90 213.5 21 20.0 9.7315 0.796 9.098 31.9752 4.90 213.3 23 21.0 9.4713 0.689 9.072 32.0230 4.89 212.9 24 22.0 9.2418 0.619 9.047 32.0755 4.89 212.9 28 23.0 9.2145 0.608 9.027 32.0881 4.87 212.0 32 24.0 9.1836 0.576 9.019 32.1023 4.84 211.1 27 25.0 9.1675 0.565 9.016 32.1079 4.83 210.3 21 26.0 9.1498 0.545 9.013 32.1129 4.81 209.5 21 27.0 9.1319 0.542 9.012 32.1197 4.78 208.4 21 28.0 9.1218 0.554 9.011 32.1271 4.74 206.6 26 29.0 9.1024 0.523 9.007 32.1400 4.69 204.3 35 30.0 9.0682 0.515 9.003 32.1576 4.66 203.1 29 31.0 9.0308 0.500 8.999 32.1729 4.64 202.0 22 32.0 9.0112 0.485 8.994 32.1812 4.62 201.1 20 33.0 8.9976 0.490 8.990 32.1858 4.59 200.1 21 34.0 8.9516 0.467 8.990 32.1984 4.59 199.8 23 35.0 8.9030 0.445 8.985 32.2142 4.58 199.3 31 36.0 8.8838 0.433 8.981 32.2208 4.56 198.4 31 37.0 8.8646 0.423 8.977 32.2264 4.53 197.4 26 38.0 8.8300 0.422 8.976 32.2346 4.50 196.1 23 39.0 8.7766 0.424 8.973 32.2499 4.48 195.0 26 40.0 8.7333 0.370 8.971 32.2635 4.44 193.3 24 41.0 8.7023 0.382 8.967 32.2733 4.38 190.7 23 42.0 8.6656 0.357 8.963 32.2846 4.32 188.1 25 43.0 8.5708 0.325 8.958 32.3073 4.20 182.7 27 44.0 8.4578 0.269 8.953 32.3702 4.04 176.0 25 45.0 8.4214 0.280 8.944 32.4413 3.95 171.9 26 46.0 8.4173 0.285 8.935 32.5250 3.82 166.3 23 47.0 8.1770 0.306 8.929 32.5294 3.75 163.3 19 48.0 7.8190 0.241 8.919 32.6393 3.71 161.7 29 49.0 7.6997 0.242 8.890 32.7235 3.62 157.4 34 50.0 7.6946 0.236 8.866 32.7372 3.52 153.3 26 51.0 7.6121 0.219 8.857 32.7999 3.49 152.1 19 52.0 7.6164 0.229 8.848 32.8235 3.50 152.2 22 53.0 7.6033 0.231 8.841 32.8280 3.51 152.7 21 54.0 7.5838 0.215 8.836 32.8346 3.51 152.9 22 55.0 7.5457 0.217 8.833 32.8423 3.52 153.0 24 56.0 7.4998 0.199 8.831 32.8466 3.51 152.7 28 57.0 7.4795 0.208 8.831 32.8513 3.50 152.2 27 58.0 7.4701 0.217 8.831 32.8559 3.49 151.9 27 59.0 7.4465 0.216 8.829 32.8619 3.48 151.6 24 60.0 7.3792 0.212 8.827 32.8830 3.48 151.5 30 61.0 7.3448 0.207 8.825 32.8949 3.48 151.3 57 62.0 7.2840 0.223 8.823 32.9196 3.48 151.4 57