*2014/04/24 09:07:27.75 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/18 17:06:54.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 55 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : FE1CF782 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 56 2 Temperature:Primary 'deg C (ITS90)' 8.0074 13.9656 3 Fluorescence:URU:Wetlabs mg/m^3 0.232 3.821 4 pH:SBE:Nominal n/a 8.852 9.249 5 Salinity:T0:C0 PSS-78 31.3447 32.7285 6 Oxygen:Dissolved:SBE mL/L 3.681 6.148 7 Oxygen:Dissolved:SBE umol/kg 160.2458 268.1961 8 Number_of_bin_records n/a 8 35 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : T06 EVENT NUMBER : 286 LATITUDE : 50 55.69000 N ! (deg min) LONGITUDE : 129 0.38000 W ! (deg min) WATER DEPTH : 60 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:50:21 4107 4107 CLEAN 5.1 2014/04/16 10:55:42 4107 4107 MERGEHDR 1.2 2014/04/16 14:31:46 4107 4107 SHIFTDAT 3.4 2014/04/16 16:45:00 4107 4107 SHIFTDAT 3.4 2014/04/16 17:29:03 4107 4107 SHIFTDAT 3.4 2014/04/17 09:42:41 4107 4107 DELETE 6.3 2014/04/17 10:07:50 4107 1440 CTDEDIT 5.0.4 2014/04/22 17:31:21 1440 1439 CALIB 11.8 2014/04/23 16:41:12 1439 1439 FILTERS 4.3 2014/04/23 17:28:12 1439 1439 BINAVE 4.1.1 2014/04/23 17:29:09 1439 55 REMOVECH 8.2 2014/04/23 17:30:26 55 55 CHGUNITS 3.1 2014/04/23 17:44:49 55 55 REORDER 1.3 2014/04/23 17:45:04 ? ? HDREDIT2 2.6 2014/04/24 09:07:27 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 46.45 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 17:31:21 1 record was deleted in this editing session. 172 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:12 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:26 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 09:07:27 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0286.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 18 2013 10:06:54 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: T06 Depth(m): 60m System UTC = Jul 18 2013 17:06:54 # nquan = 15 # nvalues = 4107 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 4107 # span 1 = 1.913, 56.450 # span 2 = 8.0038, 14.0623 # span 3 = 7.9156, 13.9871 # span 4 = 3.409645, 3.802328 # span 5 = 3.409779, 3.804730 # span 6 = 0.1425, 11.0949 # span 7 = 1.6372, 2.6923 # span 8 = 8.828, 9.254 # span 9 = 0, 1 # span 10 = 31.2920, 32.7351 # span 11 = 31.3829, 32.8199 # span 12 = 3.38962, 5.86432 # span 13 = -1.294, 1.293 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 18 2013 17:06:54 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:15, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0286.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:11:01, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-028 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:37, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 86.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:54, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0286.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:19, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0286.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to clean salinity. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titirated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 13.9656 3.184 9.247 31.3447 6.15 268.2 8 3.0 13.7762 3.199 9.249 31.3685 6.15 268.2 34 4.0 13.4889 3.436 9.241 31.3905 6.09 265.8 31 5.0 13.3991 3.746 9.236 31.3984 5.98 261.0 24 6.0 13.3006 3.821 9.231 31.4197 5.88 256.4 24 7.0 13.2003 3.656 9.225 31.4316 5.80 253.1 23 8.0 12.8842 3.322 9.220 31.4766 5.78 252.2 27 9.0 12.2961 2.554 9.206 31.5706 5.84 254.5 31 10.0 12.0975 2.330 9.182 31.6063 5.86 255.4 28 11.0 12.0625 2.232 9.170 31.6161 5.86 255.3 28 12.0 12.0536 2.218 9.168 31.6203 5.84 254.7 29 13.0 12.0419 2.222 9.167 31.6231 5.83 254.1 24 14.0 12.0103 2.228 9.166 31.6272 5.79 252.5 21 15.0 11.9950 2.111 9.165 31.6321 5.74 250.4 21 16.0 11.9724 2.020 9.163 31.6468 5.66 246.5 22 17.0 11.9320 1.892 9.163 31.6630 5.52 240.6 28 18.0 11.8669 1.734 9.158 31.6986 5.36 233.7 29 19.0 11.6703 1.338 9.154 31.7359 5.22 227.4 24 20.0 11.2378 1.208 9.146 31.8202 5.10 222.4 27 21.0 10.9924 1.220 9.126 31.9023 4.97 216.8 29 22.0 10.8968 1.201 9.105 31.9326 4.89 213.3 24 23.0 10.5428 1.072 9.093 32.0070 4.86 211.8 23 24.0 10.2660 0.794 9.074 32.0461 4.85 211.5 24 25.0 10.1772 0.881 9.053 32.0866 4.85 211.2 25 26.0 10.1115 0.816 9.039 32.0959 4.87 212.2 29 27.0 9.9580 0.748 9.031 32.0958 4.80 209.3 24 28.0 9.8667 0.691 9.026 32.0942 4.77 207.6 22 29.0 9.8658 0.728 9.021 32.1136 4.76 207.6 23 30.0 9.9212 0.696 9.016 32.1415 4.73 206.2 27 31.0 9.7631 0.667 9.014 32.1393 4.64 202.0 26 32.0 9.6066 0.568 9.011 32.1439 4.59 200.1 27 33.0 9.6244 0.557 9.004 32.2077 4.56 198.7 26 34.0 9.5892 0.543 8.996 32.2206 4.50 196.2 24 35.0 9.4989 0.494 8.988 32.2338 4.45 193.7 28 36.0 9.5288 0.485 8.981 32.2615 4.35 189.7 31 37.0 9.5054 0.481 8.976 32.2714 4.33 188.6 27 38.0 9.3707 0.439 8.972 32.3133 4.33 188.4 25 39.0 9.2649 0.420 8.964 32.3309 4.31 187.5 25 40.0 9.2177 0.415 8.956 32.3399 4.29 186.9 27 41.0 9.1955 0.408 8.949 32.3473 4.27 186.0 33 42.0 9.1457 0.386 8.945 32.3619 4.24 184.7 27 43.0 9.1095 0.391 8.942 32.3683 4.22 183.9 22 44.0 9.0894 0.413 8.939 32.3747 4.21 183.4 21 45.0 9.0283 0.432 8.936 32.3897 4.22 183.7 31 46.0 8.9805 0.395 8.935 32.3962 4.21 183.3 33 47.0 8.9010 0.370 8.931 32.3919 4.19 182.5 26 48.0 8.8662 0.348 8.926 32.3914 4.18 182.0 24 49.0 8.7969 0.375 8.923 32.3941 4.14 180.4 26 50.0 8.7281 0.361 8.919 32.3991 4.07 177.1 25 51.0 8.6172 0.320 8.917 32.4159 3.95 172.0 26 52.0 8.5366 0.299 8.911 32.4384 3.83 166.7 26 53.0 8.3135 0.256 8.903 32.5188 3.74 162.8 30 54.0 8.1384 0.237 8.884 32.6126 3.69 160.6 35 55.0 8.0162 0.232 8.865 32.7029 3.68 160.2 29 56.0 8.0074 0.232 8.852 32.7285 3.68 160.2 26