*2014/04/24 14:15:47.56 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/17 13:08:12.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 58 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : D103F798 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 59 2 Temperature:Primary 'deg C (ITS90)' 7.1999 11.3341 3 Fluorescence:URU:Wetlabs mg/m^3 0.156 3.83 4 pH:SBE:Nominal n/a 8.649 9.03 5 Salinity:T0:C0 PSS-78 31.6383 33.503 6 Oxygen:Dissolved:SBE mL/L 2.087 4.882 7 Oxygen:Dissolved:SBE umol/kg 90.78982 212.8174 8 Number_of_bin_records n/a 3 31 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : IVI03 EVENT NUMBER : 259 LATITUDE : 50 31.65000 N ! (deg min) LONGITUDE : 127 36.65000 W ! (deg min) WATER DEPTH : 55 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:50:02 6956 6956 CLEAN 5.1 2014/04/16 10:55:22 6956 6956 MERGEHDR 1.2 2014/04/16 14:31:27 6956 6956 SHIFTDAT 3.4 2014/04/16 16:44:41 6956 6956 SHIFTDAT 3.4 2014/04/16 17:28:42 6956 6956 SHIFTDAT 3.4 2014/04/17 09:42:20 6956 6956 DELETE 6.3 2014/04/17 10:07:36 6956 1465 CTDEDIT 5.0.4 2014/04/22 15:14:52 1465 1429 CALIB 11.8 2014/04/23 16:41:04 1429 1429 FILTERS 4.3 2014/04/23 17:28:04 1429 1429 BINAVE 4.1.1 2014/04/23 17:29:05 1429 58 REMOVECH 8.2 2014/04/23 17:30:25 58 58 CHGUNITS 3.1 2014/04/23 17:44:49 58 58 REORDER 1.3 2014/04/23 17:45:04 ? ? HDREDIT2 2.6 2014/04/24 14:15:47 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 49.27 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 15:14:52 36 records were deleted in this editing session. 16 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:47 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0259.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 17 2013 06:08:12 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: IVI03 Depth(m): 65m System UTC = Jul 17 2013 13:08:12 # nquan = 15 # nvalues = 6956 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 6956 # span 1 = 1.921, 59.267 # span 2 = 7.1985, 11.7856 # span 3 = 7.1106, 11.7782 # span 4 = 3.412099, 3.623105 # span 5 = 3.383905, 3.629027 # span 6 = 0.0631, 7.9044 # span 7 = 1.1269, 2.2442 # span 8 = 8.480, 9.039 # span 9 = 0, 1 # span 10 = 31.5233, 33.5047 # span 11 = 31.5642, 33.5911 # span 12 = 1.88212, 4.85872 # span 13 = -0.937, 1.167 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 17 2013 13:08:12 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:06, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0259.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:56, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-025 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:33, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 59.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:48, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0259.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:13, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0259.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface and bottom records; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 11.3341 3.830 9.030 31.6383 4.88 212.8 3 3.0 11.1159 3.490 9.028 31.7145 4.81 209.7 17 4.0 10.9070 3.199 9.013 31.7726 4.60 200.4 29 5.0 10.7664 2.974 9.003 31.8184 4.51 196.6 30 6.0 10.3262 2.490 8.997 31.9651 4.50 195.9 31 7.0 10.1984 2.147 8.984 31.9937 4.42 192.5 27 8.0 10.1717 2.389 8.967 31.9979 4.30 187.3 27 9.0 10.0528 2.111 8.956 32.0330 4.23 184.3 26 10.0 9.8191 1.982 8.950 32.1193 4.15 180.7 26 11.0 9.7359 2.005 8.942 32.1601 3.98 173.2 25 12.0 9.6919 1.703 8.930 32.1821 3.76 163.8 27 13.0 9.5322 1.558 8.923 32.2603 3.61 157.3 25 14.0 9.1529 1.212 8.915 32.4323 3.51 152.9 25 15.0 9.0124 1.174 8.896 32.4861 3.45 150.1 26 16.0 8.8134 1.024 8.877 32.5779 3.37 146.7 24 17.0 8.7649 1.058 8.851 32.6003 3.24 141.0 25 18.0 8.6904 1.075 8.830 32.6267 2.98 129.8 25 19.0 8.6231 0.860 8.819 32.6512 2.75 119.7 23 20.0 8.4074 0.539 8.810 32.7189 2.64 115.1 20 21.0 7.8688 0.290 8.798 32.9766 2.62 114.1 26 22.0 7.6925 0.215 8.769 33.1102 2.61 113.6 24 23.0 7.6720 0.220 8.741 33.1268 2.60 113.1 26 24.0 7.6646 0.230 8.722 33.1346 2.58 112.2 26 25.0 7.6528 0.230 8.714 33.1489 2.54 110.3 24 26.0 7.6415 0.229 8.709 33.1592 2.51 109.3 25 27.0 7.5586 0.219 8.706 33.2207 2.50 108.6 25 28.0 7.5258 0.190 8.704 33.2442 2.48 107.7 24 29.0 7.4958 0.189 8.701 33.2656 2.45 106.8 24 30.0 7.4850 0.205 8.698 33.2754 2.42 105.4 26 31.0 7.4683 0.186 8.696 33.2887 2.39 104.2 23 32.0 7.4468 0.189 8.694 33.3047 2.39 103.9 24 33.0 7.4038 0.180 8.692 33.3352 2.37 103.1 26 34.0 7.4035 0.172 8.688 33.3360 2.33 101.6 23 35.0 7.3965 0.168 8.686 33.3403 2.30 100.1 25 36.0 7.3570 0.172 8.684 33.3699 2.28 99.1 27 37.0 7.3350 0.156 8.681 33.3888 2.26 98.4 25 38.0 7.3197 0.174 8.678 33.4027 2.24 97.5 25 39.0 7.3081 0.180 8.675 33.4120 2.21 96.2 25 40.0 7.2992 0.163 8.672 33.4189 2.19 95.1 24 41.0 7.2877 0.165 8.670 33.4291 2.17 94.4 24 42.0 7.2632 0.172 8.668 33.4500 2.17 94.2 26 43.0 7.2473 0.166 8.664 33.4629 2.17 94.2 25 44.0 7.2420 0.177 8.663 33.4672 2.16 94.0 24 45.0 7.2389 0.181 8.660 33.4697 2.16 93.8 26 46.0 7.2387 0.173 8.659 33.4700 2.15 93.5 27 47.0 7.2358 0.171 8.659 33.4729 2.14 93.2 24 48.0 7.2341 0.166 8.657 33.4743 2.15 93.3 25 49.0 7.2296 0.176 8.658 33.4781 2.13 92.9 24 50.0 7.2281 0.177 8.658 33.4794 2.13 92.9 24 51.0 7.2267 0.172 8.655 33.4806 2.13 92.7 25 52.0 7.2252 0.170 8.655 33.4818 2.12 92.4 27 53.0 7.2222 0.162 8.654 33.4841 2.12 92.1 25 54.0 7.2212 0.187 8.653 33.4852 2.11 91.6 24 55.0 7.2177 0.177 8.653 33.4880 2.10 91.3 27 56.0 7.2118 0.177 8.652 33.4924 2.09 91.1 25 57.0 7.2058 0.182 8.651 33.4974 2.09 91.0 29 58.0 7.2018 0.229 8.649 33.5010 2.09 91.1 25 59.0 7.1999 0.187 8.649 33.5030 2.09 90.8 5