*2014/04/24 14:15:47.48 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/16 20:33:19.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 80 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : EA7D9988 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 81 2 Temperature:Primary 'deg C (ITS90)' 6.7089 11.0844 3 Fluorescence:URU:Wetlabs mg/m^3 0.148 15.738 4 pH:SBE:Nominal n/a 8.669 9.272 5 Salinity:T0:C0 PSS-78 32.4146 33.7727 6 Oxygen:Dissolved:SBE mL/L 2.153 7.573 7 Oxygen:Dissolved:SBE umol/kg 93.63604 329.9155 8 Number_of_bin_records n/a 5 44 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : VI16 EVENT NUMBER : 256 LATITUDE : 50 10.21000 N ! (deg min) LONGITUDE : 128 0.04000 W ! (deg min) WATER DEPTH : 87 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:50:00 5506 5506 CLEAN 5.1 2014/04/16 10:55:20 5506 5506 MERGEHDR 1.2 2014/04/16 14:31:26 5506 5506 SHIFTDAT 3.4 2014/04/16 16:44:39 5506 5506 SHIFTDAT 3.4 2014/04/16 17:28:41 5506 5506 SHIFTDAT 3.4 2014/04/17 09:42:19 5506 5506 DELETE 6.3 2014/04/17 10:07:35 5506 2031 CTDEDIT 5.0.4 2014/04/22 15:10:56 2031 1962 CALIB 11.8 2014/04/23 16:41:03 1962 1962 FILTERS 4.3 2014/04/23 17:28:04 1962 1962 BINAVE 4.1.1 2014/04/23 17:29:04 1962 80 REMOVECH 8.2 2014/04/23 17:30:25 80 80 CHGUNITS 3.1 2014/04/23 17:44:49 80 80 REORDER 1.3 2014/04/23 17:45:04 ? ? HDREDIT2 2.6 2014/04/24 14:15:47 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 71.52 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 15:10:56 69 records were deleted in this editing session. 111 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:03 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:47 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0256.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2013 13:33:19 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: VI16 Depth(m): 87m System UTC = Jul 16 2013 20:33:19 # nquan = 15 # nvalues = 5506 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 5506 # span 1 = 1.975, 81.523 # span 2 = 6.7038, 11.1201 # span 3 = 6.6159, 11.0346 # span 4 = 3.379274, 3.654884 # span 5 = 3.379430, 3.655540 # span 6 = 0.0473, 19.6187 # span 7 = 1.1451, 3.0257 # span 8 = 8.657, 9.276 # span 9 = 0, 1 # span 10 = 32.3674, 33.7763 # span 11 = 32.3875, 33.8645 # span 12 = 1.95416, 7.07714 # span 13 = -1.536, 1.576 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2013 20:33:19 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:05, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0256.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:56, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-025 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:33, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 56.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:48, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0256.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:12, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0256.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface and bottom records and records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 11.0844 5.816 9.266 32.4146 7.57 329.9 5 3.0 11.0565 6.397 9.266 32.4162 7.37 320.9 25 4.0 10.9399 7.624 9.267 32.4217 6.68 290.9 18 5.0 10.9341 8.412 9.267 32.4221 5.99 260.7 16 6.0 10.7717 10.475 9.267 32.4265 5.81 252.9 18 7.0 9.8624 14.870 9.272 32.5145 5.69 247.9 21 8.0 9.6870 15.738 9.243 32.5419 5.49 239.1 28 9.0 9.6475 14.017 9.186 32.5487 5.34 232.7 30 10.0 9.5991 12.706 9.122 32.5611 5.14 223.9 31 11.0 9.5462 11.278 9.070 32.5609 4.74 206.6 25 12.0 9.5225 9.939 9.043 32.5595 4.32 188.0 24 13.0 9.3325 6.735 9.031 32.5431 3.95 172.1 25 14.0 9.1262 3.454 9.023 32.5292 3.77 164.3 25 15.0 8.7617 0.799 9.004 32.5686 3.68 160.1 23 16.0 8.6306 0.561 8.969 32.6143 3.63 158.1 22 17.0 8.4140 0.479 8.925 32.6955 3.61 157.1 28 18.0 8.3412 0.431 8.889 32.7220 3.56 154.9 29 19.0 8.3146 0.420 8.865 32.7318 3.49 152.1 26 20.0 8.2565 0.402 8.853 32.7519 3.41 148.6 23 21.0 8.2228 0.392 8.844 32.7650 3.36 146.4 23 22.0 8.0982 0.361 8.837 32.8157 3.33 144.7 25 23.0 8.0035 0.349 8.831 32.8570 3.29 143.4 28 24.0 7.9153 0.353 8.823 32.8931 3.27 142.3 26 25.0 7.8894 0.356 8.816 32.9023 3.24 141.0 25 26.0 7.8529 0.344 8.807 32.9151 3.20 139.4 25 27.0 7.8149 0.332 8.803 32.9288 3.16 137.7 24 28.0 7.7706 0.318 8.799 32.9421 3.13 136.4 21 29.0 7.7063 0.339 8.796 32.9652 3.13 136.2 25 30.0 7.6050 0.302 8.792 33.0089 3.12 135.7 26 31.0 7.5899 0.292 8.787 33.0167 3.13 136.1 32 32.0 7.5782 0.285 8.783 33.0228 3.13 136.4 23 33.0 7.5448 0.294 8.780 33.0294 3.14 136.7 18 34.0 7.5249 0.272 8.779 33.0298 3.14 136.6 21 35.0 7.5073 0.268 8.778 33.0319 3.14 136.7 25 36.0 7.5089 0.287 8.778 33.0328 3.13 136.1 28 37.0 7.5082 0.270 8.776 33.0324 3.12 136.0 26 38.0 7.5065 0.264 8.775 33.0329 3.11 135.3 29 39.0 7.4787 0.241 8.774 33.0368 3.10 135.0 24 40.0 7.4496 0.280 8.774 33.0446 3.08 134.0 25 41.0 7.4511 0.249 8.773 33.0443 3.06 133.0 21 42.0 7.4278 0.240 8.773 33.0561 3.03 131.8 21 43.0 7.3989 0.231 8.769 33.0723 3.00 130.6 26 44.0 7.3487 0.215 8.768 33.0992 2.97 129.3 30 45.0 7.2820 0.220 8.764 33.1230 2.91 126.5 20 46.0 7.1939 0.202 8.762 33.1627 2.87 124.7 27 47.0 7.1294 0.202 8.760 33.2150 2.83 123.3 21 48.0 7.1437 0.202 8.754 33.2584 2.83 123.0 20 49.0 7.1958 0.206 8.748 33.2828 2.81 122.1 22 50.0 7.2325 0.219 8.742 33.2936 2.79 121.4 26 51.0 7.2610 0.231 8.735 33.3051 2.78 120.9 21 52.0 7.2839 0.235 8.732 33.3145 2.76 120.0 31 53.0 7.2861 0.252 8.731 33.3176 2.73 118.6 24 54.0 7.2932 0.233 8.729 33.3230 2.68 116.5 20 55.0 7.2984 0.236 8.726 33.3319 2.65 115.4 22 56.0 7.2817 0.271 8.725 33.3573 2.63 114.4 21 57.0 7.2383 0.267 8.722 33.3959 2.63 114.4 26 58.0 7.1852 0.230 8.720 33.4386 2.63 114.5 29 59.0 7.1472 0.225 8.717 33.4605 2.62 113.9 33 60.0 7.0967 0.177 8.714 33.4847 2.60 113.2 29 61.0 7.0691 0.180 8.713 33.5060 2.59 112.8 21 62.0 6.9927 0.169 8.713 33.5584 2.58 112.1 20 63.0 6.9767 0.173 8.711 33.5714 2.57 111.6 18 64.0 6.9559 0.159 8.710 33.6040 2.55 111.0 21 65.0 6.9483 0.167 8.709 33.6233 2.51 109.0 22 66.0 6.9460 0.162 8.710 33.6349 2.47 107.3 32 67.0 6.9327 0.156 8.709 33.6507 2.46 107.2 41 68.0 6.9177 0.182 8.708 33.6637 2.48 107.9 20 69.0 6.9167 0.162 8.704 33.6657 2.48 107.8 20 70.0 6.9209 0.161 8.700 33.6706 2.46 107.0 17 71.0 6.9221 0.176 8.698 33.6714 2.44 106.3 19 72.0 6.9031 0.158 8.699 33.6889 2.42 105.5 24 73.0 6.8891 0.165 8.699 33.6971 2.39 104.0 32 74.0 6.8735 0.153 8.698 33.7104 2.30 100.1 35 75.0 6.8514 0.148 8.697 33.7257 2.21 96.1 28 76.0 6.7956 0.166 8.695 33.7480 2.17 94.4 19 77.0 6.7464 0.170 8.692 33.7618 2.17 94.6 18 78.0 6.7314 0.182 8.687 33.7656 2.17 94.4 17 79.0 6.7228 0.185 8.678 33.7669 2.17 94.2 24 80.0 6.7212 0.178 8.672 33.7678 2.15 93.6 44 81.0 6.7089 0.172 8.669 33.7727 2.15 93.7 19