*2014/04/24 14:15:47.37 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/16 16:35:53.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 79 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1413D4CA NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 81 2 Temperature:Primary 'deg C (ITS90)' 6.4784 11.2968 3 Fluorescence:URU:Wetlabs mg/m^3 0.153 38.042 4 pH:SBE:Nominal n/a 8.707 9.402 5 Salinity:T0:C0 PSS-78 32.042 33.865 6 Oxygen:Dissolved:SBE mL/L 2.167 7.678 7 Oxygen:Dissolved:SBE umol/kg 94.23499 334.5967 8 Number_of_bin_records n/a 3 45 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : VI14 EVENT NUMBER : 250 LATITUDE : 50 0.05000 N ! (deg min) LONGITUDE : 127 40.27000 W ! (deg min) WATER DEPTH : 83 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:56 5162 5162 CLEAN 5.1 2014/04/16 10:55:17 5162 5162 MERGEHDR 1.2 2014/04/16 14:31:22 5162 5162 SHIFTDAT 3.4 2014/04/16 16:44:36 5162 5162 SHIFTDAT 3.4 2014/04/16 17:28:37 5162 5162 SHIFTDAT 3.4 2014/04/17 09:42:15 5162 5162 DELETE 6.3 2014/04/17 10:07:32 5162 2035 CTDEDIT 5.0.4 2014/04/22 14:04:46 2035 2000 CALIB 11.8 2014/04/23 16:41:02 2000 2000 FILTERS 4.3 2014/04/23 17:28:02 2000 2000 BINAVE 4.1.1 2014/04/23 17:29:04 2000 79 REMOVECH 8.2 2014/04/23 17:30:25 79 79 CHGUNITS 3.1 2014/04/23 17:44:49 79 79 REORDER 1.3 2014/04/23 17:45:04 ? ? HDREDIT2 2.6 2014/04/24 14:15:47 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 70.98 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 14:04:46 35 records were deleted in this editing session. 33 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:02 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:47 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0250.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2013 09:35:53 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: VI14 Depth(m): 83m System UTC = Jul 16 2013 16:35:53 # nquan = 15 # nvalues = 5162 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 5162 # span 1 = 2.071, 80.979 # span 2 = 6.4663, 11.5419 # span 3 = 6.3805, 11.4561 # span 4 = 3.381496, 3.654786 # span 5 = 3.381497, 3.655252 # span 6 = 0.0790, 50.5711 # span 7 = 1.1475, 3.2699 # span 8 = 8.637, 9.411 # span 9 = 0, 1 # span 10 = 32.0184, 33.8694 # span 11 = 32.0974, 33.9557 # span 12 = 1.97301, 7.71725 # span 13 = -1.520, 1.374 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2013 16:35:53 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:03, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0250.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:55, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-025 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:32, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 50.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:47, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0250.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:11, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0250.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface and bottom records; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 11.2968 29.928 9.402 32.0420 7.68 334.6 17 4.0 11.2324 35.807 9.402 32.0465 7.54 328.5 23 5.0 11.2012 36.850 9.396 32.0496 7.43 323.9 22 6.0 11.1810 37.319 9.377 32.0534 7.37 321.0 25 7.0 11.1718 38.042 9.357 32.0555 7.30 318.2 30 8.0 11.1666 35.789 9.340 32.0583 7.09 308.8 28 9.0 11.1668 33.864 9.328 32.0624 6.63 289.0 25 10.0 11.1439 33.689 9.321 32.0686 6.00 261.4 19 11.0 10.9183 29.328 9.316 32.1137 5.09 221.9 25 12.0 10.6608 26.977 9.293 32.1680 4.26 185.8 27 13.0 9.8183 16.479 9.262 32.2947 3.88 169.1 28 14.0 8.6095 4.578 9.191 32.5000 3.77 164.4 24 15.0 8.2599 1.211 9.091 32.5781 3.68 160.2 23 16.0 8.1341 0.736 8.982 32.6015 3.61 157.2 20 17.0 7.9910 0.542 8.924 32.6901 3.55 154.5 30 18.0 7.9581 0.497 8.888 32.7218 3.50 152.4 23 19.0 7.9361 0.434 8.863 32.7411 3.47 151.1 21 20.0 7.9032 0.443 8.848 32.7668 3.41 148.3 27 21.0 7.8725 0.393 8.838 32.7915 3.26 141.9 32 22.0 7.8310 0.385 8.831 32.8230 3.15 137.0 27 23.0 7.7259 0.367 8.825 32.9021 3.10 135.1 25 24.0 7.6818 0.366 8.813 32.9461 3.07 133.5 22 25.0 7.6738 0.346 8.802 32.9583 3.04 132.5 23 26.0 7.6643 0.361 8.794 32.9703 3.03 131.8 28 27.0 7.6547 0.319 8.790 32.9813 3.00 130.6 31 28.0 7.6512 0.311 8.786 32.9873 2.98 129.5 28 29.0 7.6456 0.323 8.782 32.9966 2.96 128.7 29 30.0 7.6425 0.321 8.781 33.0027 2.95 128.3 23 31.0 7.6388 0.337 8.778 33.0087 2.93 127.4 23 32.0 7.6352 0.369 8.776 33.0143 2.90 126.0 25 33.0 7.6298 0.337 8.774 33.0207 2.85 123.8 33 34.0 7.5973 0.333 8.773 33.0538 2.81 122.4 29 35.0 7.5021 0.302 8.773 33.1413 2.80 121.9 24 36.0 7.4879 0.306 8.768 33.1530 2.79 121.3 23 37.0 7.4775 0.329 8.765 33.1617 2.77 120.6 21 38.0 7.4665 0.325 8.764 33.1708 2.73 118.8 30 39.0 7.4597 0.319 8.763 33.1772 2.66 115.8 34 40.0 7.3962 0.339 8.760 33.2376 2.61 113.5 25 41.0 7.3369 0.307 8.758 33.2931 2.59 112.7 20 42.0 7.3024 0.322 8.755 33.3255 2.57 111.9 23 43.0 7.2694 0.359 8.751 33.3571 2.55 110.9 26 44.0 7.2589 0.254 8.747 33.3668 2.52 109.6 34 45.0 7.2252 0.240 8.744 33.3984 2.50 108.8 26 46.0 7.2046 0.238 8.741 33.4169 2.49 108.2 19 47.0 7.1831 0.291 8.740 33.4346 2.48 107.8 20 48.0 7.1702 0.248 8.737 33.4453 2.46 107.0 32 49.0 7.1523 0.243 8.736 33.4600 2.43 105.9 45 50.0 7.1164 0.232 8.733 33.4905 2.44 105.9 21 51.0 7.0671 0.214 8.732 33.5401 2.44 106.0 21 52.0 7.0548 0.230 8.730 33.5567 2.43 105.8 22 53.0 7.0322 0.214 8.730 33.5848 2.40 104.5 30 54.0 7.0168 0.209 8.733 33.5974 2.36 102.7 29 55.0 6.9827 0.193 8.733 33.6246 2.34 101.8 24 56.0 6.9334 0.187 8.733 33.6595 2.33 101.5 23 57.0 6.8945 0.197 8.729 33.6789 2.33 101.4 33 58.0 6.8820 0.194 8.728 33.6845 2.32 101.0 30 59.0 6.8658 0.170 8.727 33.6945 2.32 100.8 21 60.0 6.8532 0.188 8.725 33.7014 2.31 100.6 20 61.0 6.8444 0.175 8.724 33.7057 2.31 100.5 24 62.0 6.8351 0.194 8.724 33.7107 2.29 99.8 41 63.0 6.7871 0.186 8.724 33.7330 2.29 99.5 25 64.0 6.7443 0.189 8.725 33.7513 2.29 99.4 23 65.0 6.7362 0.188 8.725 33.7546 2.28 99.3 21 66.0 6.7310 0.187 8.724 33.7571 2.27 98.9 28 67.0 6.7303 0.178 8.723 33.7588 2.27 98.9 25 68.0 6.7288 0.185 8.722 33.7612 2.26 98.5 20 69.0 6.7267 0.192 8.721 33.7643 2.26 98.1 22 70.0 6.7115 0.179 8.720 33.7769 2.25 97.9 27 71.0 6.6968 0.174 8.720 33.7837 2.24 97.5 36 72.0 6.6927 0.183 8.719 33.7859 2.22 96.6 24 73.0 6.6862 0.193 8.720 33.7894 2.21 96.3 21 74.0 6.6629 0.166 8.718 33.8020 2.21 96.0 21 75.0 6.6452 0.174 8.717 33.8109 2.20 95.8 24 76.0 6.6350 0.181 8.715 33.8144 2.18 94.9 30 77.0 6.6154 0.180 8.713 33.8201 2.17 94.3 32 78.0 6.5177 0.174 8.713 33.8490 2.17 94.2 13 79.0 6.4814 0.162 8.712 33.8637 2.17 94.4 15 80.0 6.4796 0.153 8.712 33.8643 2.17 94.2 16 81.0 6.4784 0.201 8.707 33.8650 2.18 94.8 3