*2014/04/24 14:15:47.26 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/16 13:07:51.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 71 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A98824F7 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 72 2 Temperature:Primary 'deg C (ITS90)' 6.5922 12.0236 3 Fluorescence:URU:Wetlabs mg/m^3 0.149 25.849 4 pH:SBE:Nominal n/a 8.59 9.301 5 Salinity:T0:C0 PSS-78 31.8633 33.8749 6 Oxygen:Dissolved:SBE mL/L 2.006 7.449 7 Oxygen:Dissolved:SBE umol/kg 87.23423 324.7029 8 Number_of_bin_records n/a 6 45 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : VI12 EVENT NUMBER : 244 LATITUDE : 49 49.75000 N ! (deg min) LONGITUDE : 127 19.88000 W ! (deg min) WATER DEPTH : 80 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:54 4988 4988 CLEAN 5.1 2014/04/16 10:55:14 4988 4988 MERGEHDR 1.2 2014/04/16 14:31:20 4988 4988 SHIFTDAT 3.4 2014/04/16 16:44:34 4988 4988 SHIFTDAT 3.4 2014/04/16 17:28:35 4988 4988 SHIFTDAT 3.4 2014/04/17 09:42:13 4988 4988 DELETE 6.3 2014/04/17 10:07:30 4988 1968 CTDEDIT 5.0.4 2014/04/22 13:10:29 1968 1950 CALIB 11.8 2014/04/23 16:41:01 1950 1950 FILTERS 4.3 2014/04/23 17:28:01 1950 1950 BINAVE 4.1.1 2014/04/23 17:29:03 1950 71 REMOVECH 8.2 2014/04/23 17:30:25 71 71 CHGUNITS 3.1 2014/04/23 17:44:49 71 71 REORDER 1.3 2014/04/23 17:45:03 ? ? HDREDIT2 2.6 2014/04/24 14:15:47 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 61.90 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 13:10:29 18 records were deleted in this editing session. 25 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:41:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:47 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0244.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2013 06:07:51 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: VI12 Depth(m): 80m System UTC = Jul 16 2013 13:07:51 # nquan = 15 # nvalues = 4988 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 4988 # span 1 = 1.834, 71.899 # span 2 = 6.5919, 12.0243 # span 3 = 6.5054, 11.9333 # span 4 = 3.392850, 3.679047 # span 5 = 3.393135, 3.679500 # span 6 = 0.0631, 29.8885 # span 7 = 1.1011, 3.0147 # span 8 = 8.575, 9.306 # span 9 = 0, 1 # span 10 = 31.8156, 33.8754 # span 11 = 31.8973, 33.9646 # span 12 = 1.82602, 6.92760 # span 13 = -1.356, 1.313 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2013 13:07:51 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:02, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0244.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:54, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-024 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:31, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 44.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:47, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0244.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:10, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0244.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few surface and bottom records; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 12.0231 23.717 9.296 31.8637 7.45 324.7 6 3.0 12.0230 23.819 9.296 31.8637 7.44 324.1 44 4.0 12.0233 24.569 9.296 31.8636 7.44 324.1 42 5.0 12.0231 24.962 9.297 31.8633 7.43 323.7 35 6.0 12.0236 25.101 9.297 31.8634 7.33 319.5 30 7.0 12.0220 25.849 9.296 31.8633 6.83 297.9 28 8.0 12.0217 25.628 9.296 31.8633 5.97 260.1 26 9.0 11.8257 25.213 9.298 31.8826 5.12 223.3 27 10.0 11.1273 19.892 9.301 32.0595 4.39 191.3 25 11.0 10.5043 11.225 9.283 32.2164 3.90 170.1 24 12.0 9.1831 1.850 9.225 32.5681 3.71 161.7 28 13.0 7.9488 0.492 9.092 32.8518 3.66 159.4 27 14.0 7.7192 0.381 8.931 32.9133 3.50 152.2 25 15.0 7.5968 0.364 8.830 32.9781 3.22 140.2 24 16.0 7.5441 0.272 8.790 33.0289 3.07 133.8 21 17.0 7.4643 0.219 8.762 33.1042 3.00 130.4 23 18.0 7.4350 0.210 8.725 33.1462 2.89 125.6 28 19.0 7.4308 0.192 8.685 33.1588 2.77 120.3 33 20.0 7.4336 0.222 8.665 33.1724 2.69 116.9 29 21.0 7.4360 0.201 8.651 33.1804 2.64 114.7 26 22.0 7.4297 0.201 8.639 33.1944 2.65 115.2 25 23.0 7.3859 0.209 8.633 33.2472 2.67 116.1 29 24.0 7.3642 0.207 8.629 33.2711 2.73 119.0 30 25.0 7.3613 0.208 8.630 33.2755 2.83 123.0 26 26.0 7.3597 0.205 8.633 33.2789 2.87 124.9 24 27.0 7.3535 0.200 8.639 33.2890 2.91 126.5 25 28.0 7.3496 0.192 8.646 33.2949 2.94 127.8 22 29.0 7.3425 0.189 8.655 33.3044 2.95 128.5 30 30.0 7.3370 0.187 8.666 33.3121 2.95 128.5 36 31.0 7.3235 0.191 8.672 33.3317 2.89 125.8 31 32.0 7.2874 0.188 8.675 33.3925 2.84 123.7 24 33.0 7.2672 0.185 8.678 33.4185 2.80 121.9 25 34.0 7.2551 0.174 8.674 33.4338 2.77 120.4 27 35.0 7.2423 0.188 8.670 33.4518 2.73 118.9 26 36.0 7.2140 0.187 8.666 33.4902 2.71 118.0 33 37.0 7.1885 0.173 8.661 33.5194 2.68 116.6 43 38.0 7.1746 0.176 8.659 33.5304 2.62 113.8 26 39.0 7.1595 0.158 8.657 33.5450 2.55 111.0 19 40.0 7.1418 0.181 8.655 33.5622 2.51 109.1 20 41.0 7.0986 0.175 8.653 33.5985 2.48 107.7 27 42.0 7.0465 0.185 8.645 33.6380 2.44 106.0 45 43.0 7.0064 0.172 8.639 33.6710 2.41 104.7 31 44.0 6.9807 0.189 8.634 33.6887 2.35 102.4 23 45.0 6.9494 0.165 8.632 33.7053 2.29 99.6 18 46.0 6.9244 0.165 8.632 33.7182 2.23 97.0 22 47.0 6.8595 0.162 8.633 33.7510 2.19 95.1 29 48.0 6.7728 0.165 8.625 33.7963 2.17 94.5 39 49.0 6.7547 0.170 8.615 33.8064 2.17 94.2 28 50.0 6.7562 0.163 8.611 33.8095 2.15 93.7 21 51.0 6.7528 0.169 8.609 33.8135 2.15 93.3 21 52.0 6.7501 0.172 8.608 33.8170 2.15 93.4 26 53.0 6.7471 0.165 8.608 33.8190 2.14 93.2 31 54.0 6.7440 0.188 8.607 33.8213 2.13 92.6 26 55.0 6.7388 0.165 8.607 33.8252 2.12 92.1 24 56.0 6.7317 0.179 8.606 33.8308 2.11 91.8 24 57.0 6.7138 0.167 8.605 33.8415 2.10 91.2 24 58.0 6.7039 0.184 8.605 33.8461 2.08 90.5 26 59.0 6.6988 0.171 8.604 33.8482 2.05 89.3 32 60.0 6.6351 0.156 8.603 33.8654 2.05 89.1 25 61.0 6.6240 0.151 8.600 33.8676 2.05 89.0 28 62.0 6.6211 0.162 8.597 33.8681 2.04 88.6 31 63.0 6.6182 0.166 8.597 33.8687 2.03 88.3 31 64.0 6.6157 0.170 8.596 33.8694 2.03 88.1 25 65.0 6.6127 0.149 8.595 33.8703 2.02 87.8 21 66.0 6.6070 0.151 8.595 33.8714 2.02 87.8 25 67.0 6.6043 0.154 8.595 33.8718 2.02 87.6 27 68.0 6.6043 0.153 8.594 33.8720 2.01 87.5 27 69.0 6.5960 0.177 8.593 33.8739 2.01 87.2 27 70.0 6.5949 0.162 8.591 33.8742 2.01 87.6 31 71.0 6.5932 0.157 8.591 33.8746 2.01 87.2 34 72.0 6.5922 0.163 8.590 33.8749 2.01 87.2 12