*2014/04/24 14:15:47.01 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/15 16:06:48.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 106 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 5F31EFED NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 107 2 Temperature:Primary 'deg C (ITS90)' 6.4819 12.2863 3 Fluorescence:URU:Wetlabs mg/m^3 0.141 38.222 4 pH:SBE:Nominal n/a 8.623 9.446 5 Salinity:T0:C0 PSS-78 31.6085 33.9037 6 Oxygen:Dissolved:SBE mL/L 1.921 8.337 7 Oxygen:Dissolved:SBE umol/kg 83.53486 363.4986 8 Number_of_bin_records n/a 4 36 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : EP03 EVENT NUMBER : 229 LATITUDE : 49 16.53000 N ! (deg min) LONGITUDE : 126 40.80000 W ! (deg min) WATER DEPTH : 112 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:42 6745 6745 CLEAN 5.1 2014/04/16 10:55:02 6745 6745 MERGEHDR 1.2 2014/04/16 14:31:07 6745 6745 SHIFTDAT 3.4 2014/04/16 16:44:22 6745 6745 SHIFTDAT 3.4 2014/04/16 17:28:24 6745 6745 SHIFTDAT 3.4 2014/04/17 09:42:00 6745 6745 DELETE 6.3 2014/04/17 10:07:21 6745 2775 CTDEDIT 5.0.4 2014/04/22 10:55:21 2775 2724 CALIB 11.8 2014/04/23 16:40:56 2724 2724 FILTERS 4.3 2014/04/23 17:27:57 2724 2724 BINAVE 4.1.1 2014/04/23 17:29:01 2724 106 REMOVECH 8.2 2014/04/23 17:30:25 106 106 CHGUNITS 3.1 2014/04/23 17:44:48 106 106 REORDER 1.3 2014/04/23 17:45:03 ? ? HDREDIT2 2.6 2014/04/24 14:15:47 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 97.76 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 10:55:21 51 records were deleted in this editing session. 92 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:56 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:47 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0229.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 15 2013 09:06:48 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: EP03 Depth(m): 112m System UTC = Jul 15 2013 16:06:48 # nquan = 15 # nvalues = 6745 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 6745 # span 1 = 1.515, 107.764 # span 2 = 6.4774, 12.3055 # span 3 = 6.3906, 12.2154 # span 4 = 3.386887, 3.677178 # span 5 = 3.387112, 3.677674 # span 6 = 0.0314, 47.9520 # span 7 = 1.0717, 3.4665 # span 8 = 8.449, 9.465 # span 9 = 0, 1 # span 10 = 31.5688, 33.9049 # span 11 = 31.6486, 33.9950 # span 12 = 1.74321, 8.13902 # span 13 = -1.414, 1.414 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 15 2013 16:06:48 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:07:57, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0229.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:52, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-022 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:29, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 29.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:44, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0229.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:06, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0229.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 12.2863 38.222 9.446 31.6085 8.34 363.5 4 3.0 12.2557 36.836 9.446 31.6090 8.32 362.9 17 4.0 12.2446 37.024 9.440 31.6093 8.27 360.4 26 5.0 12.2345 36.718 9.433 31.6100 8.21 358.1 22 6.0 12.2302 35.129 9.426 31.6106 7.97 347.4 25 7.0 12.2243 34.587 9.420 31.6124 7.09 309.2 25 8.0 12.2234 34.697 9.417 31.6144 5.70 248.6 27 9.0 11.8110 32.859 9.417 31.7380 4.54 198.0 32 10.0 10.7323 23.072 9.417 32.0120 4.00 174.3 31 11.0 9.4974 11.378 9.331 32.2887 3.91 170.2 27 12.0 8.8852 10.088 9.144 32.4194 3.88 168.8 27 13.0 8.6947 8.944 8.996 32.4654 3.85 167.4 34 14.0 8.5787 8.208 8.913 32.4938 3.80 165.6 36 15.0 8.4107 7.767 8.856 32.5290 3.76 163.6 28 16.0 8.2640 7.123 8.831 32.5767 3.71 161.4 25 17.0 8.1447 5.138 8.817 32.6272 3.62 157.6 30 18.0 8.0163 2.959 8.810 32.6711 3.53 153.9 25 19.0 7.9630 2.415 8.804 32.6916 3.50 152.3 22 20.0 7.9278 2.241 8.795 32.7071 3.48 151.3 26 21.0 7.9040 2.062 8.785 32.7238 3.43 149.1 35 22.0 7.8648 1.545 8.775 32.7519 3.40 148.0 32 23.0 7.8306 1.312 8.769 32.7733 3.37 146.5 25 24.0 7.8081 1.167 8.763 32.7894 3.31 144.3 22 25.0 7.7814 1.211 8.760 32.8139 3.29 143.0 22 26.0 7.7073 1.064 8.757 32.8815 3.20 139.3 30 27.0 7.6591 0.936 8.757 32.9296 2.99 130.2 32 28.0 7.6351 0.765 8.751 32.9585 2.79 121.6 24 29.0 7.6225 0.565 8.746 32.9929 2.64 115.1 23 30.0 7.6054 0.457 8.737 33.0275 2.56 111.3 24 31.0 7.6040 0.300 8.722 33.0570 2.54 110.7 24 32.0 7.6031 0.248 8.707 33.0873 2.59 112.7 28 33.0 7.5772 0.237 8.689 33.1059 2.66 115.9 33 34.0 7.5606 0.252 8.675 33.1106 2.99 130.2 36 35.0 7.5425 0.249 8.671 33.1158 3.07 133.6 22 36.0 7.4623 0.234 8.671 33.1268 2.97 129.1 22 37.0 7.4250 0.205 8.680 33.1442 2.91 126.5 22 38.0 7.4143 0.203 8.701 33.1601 2.90 126.4 21 39.0 7.4030 0.190 8.713 33.1764 2.89 125.7 28 40.0 7.3967 0.201 8.710 33.1877 2.89 125.7 35 41.0 7.3956 0.215 8.707 33.1965 2.91 126.6 26 42.0 7.3944 0.204 8.706 33.2142 3.00 130.4 22 43.0 7.3919 0.173 8.703 33.2400 3.06 133.1 23 44.0 7.3650 0.177 8.703 33.2797 3.05 132.8 25 45.0 7.3452 0.188 8.705 33.3066 3.02 131.5 32 46.0 7.3347 0.176 8.713 33.3319 2.99 130.0 31 47.0 7.3309 0.177 8.718 33.3446 2.97 129.0 23 48.0 7.3279 0.171 8.721 33.3553 2.95 128.3 24 49.0 7.3218 0.173 8.722 33.3712 2.96 129.0 27 50.0 7.3134 0.171 8.721 33.3982 2.99 130.0 23 51.0 7.3114 0.197 8.721 33.4177 3.02 131.5 22 52.0 7.3100 0.177 8.721 33.4360 3.05 132.6 23 53.0 7.3109 0.155 8.721 33.4499 3.08 133.8 32 54.0 7.3134 0.177 8.722 33.4557 3.11 135.2 29 55.0 7.3149 0.159 8.724 33.4628 3.12 135.9 24 56.0 7.3155 0.160 8.727 33.4718 3.10 134.9 24 57.0 7.3131 0.157 8.732 33.4803 3.00 130.6 34 58.0 7.2927 0.151 8.736 33.4990 2.96 128.8 26 59.0 7.2667 0.161 8.736 33.5098 2.95 128.3 19 60.0 7.2462 0.156 8.737 33.5307 2.93 127.4 19 61.0 7.2540 0.154 8.730 33.5730 2.92 126.8 25 62.0 7.2174 0.150 8.726 33.6018 2.89 125.9 33 63.0 7.2045 0.161 8.726 33.6254 2.85 124.0 27 64.0 7.1968 0.143 8.726 33.6453 2.79 121.3 24 65.0 7.1688 0.150 8.723 33.6541 2.71 117.9 23 66.0 7.1555 0.150 8.722 33.6575 2.56 111.3 22 67.0 7.1261 0.145 8.719 33.6594 2.43 105.8 27 68.0 7.0396 0.156 8.716 33.6534 2.41 104.7 28 69.0 6.9699 0.160 8.710 33.6580 2.38 103.6 24 70.0 6.9585 0.154 8.699 33.6779 2.32 100.8 25 71.0 6.9562 0.157 8.684 33.6910 2.25 97.6 22 72.0 6.8985 0.157 8.674 33.7068 2.17 94.6 22 73.0 6.8195 0.162 8.670 33.7324 2.12 92.4 27 74.0 6.7347 0.162 8.666 33.7689 2.10 91.4 29 75.0 6.6935 0.166 8.661 33.7873 2.07 90.1 26 76.0 6.6805 0.170 8.653 33.7929 2.05 89.2 26 77.0 6.6652 0.170 8.647 33.8000 2.05 89.1 24 78.0 6.6421 0.179 8.643 33.8120 2.08 90.3 22 79.0 6.6361 0.154 8.637 33.8157 2.17 94.3 25 80.0 6.6302 0.166 8.635 33.8212 2.24 97.5 27 81.0 6.6393 0.141 8.633 33.8451 2.27 98.8 25 82.0 6.6584 0.168 8.634 33.8565 2.28 99.0 23 83.0 6.6622 0.161 8.641 33.8631 2.26 98.4 21 84.0 6.6635 0.156 8.649 33.8681 2.24 97.6 21 85.0 6.6633 0.151 8.654 33.8745 2.22 96.7 26 86.0 6.6610 0.165 8.658 33.8812 2.21 96.2 32 87.0 6.6584 0.168 8.657 33.8841 2.19 95.2 32 88.0 6.6513 0.155 8.658 33.8839 2.17 94.5 28 89.0 6.6411 0.156 8.657 33.8835 2.15 93.5 22 90.0 6.6103 0.161 8.655 33.8857 2.13 92.7 19 91.0 6.5861 0.157 8.653 33.8904 2.12 92.4 20 92.0 6.5585 0.157 8.651 33.8946 2.12 92.1 27 93.0 6.5455 0.165 8.650 33.8968 2.11 91.9 36 94.0 6.5403 0.154 8.648 33.8975 2.09 91.0 29 95.0 6.5375 0.157 8.648 33.8981 2.08 90.3 22 96.0 6.5330 0.153 8.644 33.8984 2.06 89.7 18 97.0 6.5260 0.164 8.644 33.8993 2.04 88.8 19 98.0 6.5204 0.166 8.643 33.8999 2.02 88.1 21 99.0 6.5154 0.156 8.641 33.9005 2.00 86.9 28 100.0 6.5023 0.169 8.639 33.9016 1.98 86.2 36 101.0 6.4973 0.165 8.638 33.9021 1.97 85.5 30 102.0 6.4976 0.165 8.635 33.9022 1.95 84.8 22 103.0 6.4942 0.168 8.630 33.9022 1.94 84.2 20 104.0 6.4868 0.175 8.629 33.9031 1.93 83.9 20 105.0 6.4855 0.170 8.626 33.9034 1.92 83.6 21 106.0 6.4830 0.175 8.624 33.9035 1.92 83.5 26 107.0 6.4819 0.178 8.623 33.9037 1.92 83.6 22