*2014/04/24 14:15:46.96 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/15 14:43:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 86 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : C4F22875 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 89 2 Temperature:Primary 'deg C (ITS90)' 6.6796 11.5163 3 Fluorescence:URU:Wetlabs mg/m^3 0.17 34.636 4 pH:SBE:Nominal n/a 8.54 9.273 5 Salinity:T0:C0 PSS-78 31.676 33.8721 6 Oxygen:Dissolved:SBE mL/L 1.445 7.294 7 Oxygen:Dissolved:SBE umol/kg 62.8446 317.963 8 Number_of_bin_records n/a 9 50 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : EP02 EVENT NUMBER : 226 LATITUDE : 49 18.61000 N ! (deg min) LONGITUDE : 126 37.13000 W ! (deg min) WATER DEPTH : 93 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:41 6021 6021 CLEAN 5.1 2014/04/16 10:55:01 6021 6021 MERGEHDR 1.2 2014/04/16 14:31:06 6021 6021 SHIFTDAT 3.4 2014/04/16 16:44:21 6021 6021 SHIFTDAT 3.4 2014/04/16 17:28:22 6021 6021 SHIFTDAT 3.4 2014/04/17 09:41:59 6021 6021 DELETE 6.3 2014/04/17 10:07:20 6021 2354 CTDEDIT 5.0.4 2014/04/22 10:27:35 2354 2241 CALIB 11.8 2014/04/23 16:40:55 2241 2241 FILTERS 4.3 2014/04/23 17:27:56 2241 2241 BINAVE 4.1.1 2014/04/23 17:29:00 2241 86 REMOVECH 8.2 2014/04/23 17:30:25 86 86 CHGUNITS 3.1 2014/04/23 17:44:48 86 86 REORDER 1.3 2014/04/23 17:45:03 ? ? HDREDIT2 2.6 2014/04/24 14:15:46 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 79.73 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/22 10:27:35 113 records were deleted in this editing session. 16 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:55 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:25 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:46 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0226.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 15 2013 07:43:46 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: EP02 Depth(m): 94m System UTC = Jul 15 2013 14:43:46 # nquan = 15 # nvalues = 6021 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 6021 # span 1 = 1.836, 89.728 # span 2 = 6.6793, 11.5292 # span 3 = 6.5928, 11.4381 # span 4 = 3.386025, 3.616182 # span 5 = 3.386075, 3.616293 # span 6 = 0.0949, 39.6981 # span 7 = 0.9398, 3.0062 # span 8 = 8.529, 9.281 # span 9 = 0, 1 # span 10 = 31.6404, 33.8737 # span 11 = 31.7249, 33.9628 # span 12 = 1.30222, 6.99944 # span 13 = -1.912, 1.583 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 15 2013 14:43:46 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:07:56, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0226.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:51, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-022 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:28, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-02 26.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:44, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0226.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:06, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0226.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 11.5163 32.307 9.271 31.6760 7.29 318.0 9 5.0 11.4998 34.636 9.272 31.6776 7.26 316.7 43 6.0 11.4837 34.099 9.273 31.6806 7.00 305.0 33 7.0 11.4731 32.763 9.268 31.6846 6.16 268.4 28 8.0 11.4265 31.351 9.259 31.7023 5.27 229.7 31 9.0 10.9511 24.460 9.255 31.8397 4.91 213.9 29 10.0 10.2065 17.854 9.236 32.0219 4.92 214.2 22 11.0 9.6847 16.514 9.189 32.1462 4.98 216.8 21 12.0 9.5991 19.372 9.105 32.1629 5.03 219.2 25 13.0 9.5361 18.785 9.018 32.1757 5.09 221.8 37 14.0 9.3970 20.637 8.975 32.1998 4.97 216.5 29 15.0 9.1336 13.091 8.965 32.2424 4.95 215.7 23 16.0 8.8468 8.004 8.965 32.2968 5.02 218.5 20 17.0 8.6703 4.228 8.966 32.3335 5.03 219.1 23 18.0 8.4390 1.425 8.960 32.3827 5.00 217.7 28 19.0 8.3084 0.891 8.949 32.4174 5.03 219.0 33 20.0 8.2385 0.775 8.940 32.4379 5.00 217.5 23 21.0 8.1597 0.647 8.936 32.4555 4.64 202.0 20 22.0 7.9617 0.523 8.936 32.5240 4.30 187.1 22 23.0 7.9686 0.409 8.934 32.5680 3.94 171.4 36 24.0 8.0359 0.344 8.908 32.6083 3.32 144.4 33 25.0 8.0175 0.268 8.857 32.6491 3.12 136.0 18 26.0 8.0791 0.259 8.834 32.7006 3.07 133.6 16 27.0 8.0730 0.272 8.795 32.7206 3.05 132.8 16 28.0 8.0754 0.225 8.753 32.7346 3.03 131.9 28 29.0 8.0743 0.234 8.720 32.7415 2.97 129.4 31 30.0 8.0655 0.219 8.705 32.7504 2.98 129.9 20 31.0 8.0413 0.216 8.701 32.7673 3.14 136.8 17 32.0 8.0237 0.208 8.697 32.7795 3.30 143.8 18 33.0 7.9804 0.225 8.693 32.7972 3.47 150.9 23 34.0 7.8744 0.239 8.694 32.8037 3.62 157.6 31 35.0 7.7903 0.259 8.719 32.8003 3.75 163.1 33 36.0 7.7354 0.269 8.749 32.8013 3.63 158.2 35 37.0 7.7151 0.268 8.768 32.8055 3.23 140.5 22 38.0 7.7217 0.257 8.779 32.8124 2.98 129.8 16 39.0 7.7280 0.257 8.784 32.8675 2.90 126.1 17 40.0 7.7568 0.230 8.772 32.9021 2.88 125.2 23 41.0 7.7725 0.216 8.727 32.9297 3.02 131.3 50 42.0 7.7464 0.230 8.692 32.9358 3.22 140.2 23 43.0 7.7048 0.234 8.691 32.9377 3.25 141.6 18 44.0 7.6696 0.221 8.700 32.9385 3.26 141.8 18 45.0 7.6622 0.244 8.714 32.9403 3.26 142.0 26 46.0 7.6531 0.236 8.725 32.9427 3.25 141.3 41 47.0 7.6379 0.220 8.729 32.9457 3.12 135.7 26 48.0 7.6034 0.200 8.729 32.9625 2.96 129.0 23 49.0 7.5789 0.216 8.729 32.9935 2.83 123.4 27 50.0 7.5716 0.215 8.721 33.0322 2.73 119.0 25 51.0 7.5711 0.219 8.704 33.0502 2.68 116.5 23 52.0 7.5540 0.208 8.689 33.0823 2.64 114.8 23 53.0 7.5309 0.210 8.675 33.1141 2.57 112.0 36 54.0 7.5190 0.197 8.665 33.1365 2.51 109.1 33 55.0 7.5181 0.206 8.658 33.1520 2.47 107.4 21 56.0 7.5092 0.202 8.651 33.1704 2.47 107.3 18 57.0 7.4868 0.197 8.645 33.1920 2.46 106.9 20 58.0 7.4660 0.205 8.641 33.2161 2.43 105.8 42 59.0 7.4531 0.202 8.638 33.2291 2.29 99.9 34 60.0 7.4391 0.185 8.638 33.2463 2.14 93.3 18 61.0 7.4022 0.198 8.635 33.2945 2.06 89.5 19 62.0 7.3473 0.209 8.630 33.3623 1.98 86.3 25 63.0 7.3073 0.208 8.617 33.4102 1.90 82.8 38 64.0 7.2909 0.211 8.599 33.4281 1.82 79.2 24 65.0 7.2785 0.213 8.588 33.4403 1.76 76.7 21 66.0 7.2282 0.217 8.581 33.4913 1.70 73.9 23 67.0 7.1997 0.218 8.572 33.5199 1.64 71.5 33 68.0 7.1352 0.238 8.565 33.5834 1.66 72.0 29 69.0 7.0869 0.215 8.558 33.6342 1.68 73.1 22 70.0 7.0755 0.214 8.553 33.6518 1.67 72.6 21 71.0 7.0696 0.211 8.552 33.6665 1.64 71.2 23 72.0 7.0586 0.205 8.555 33.6786 1.57 68.2 33 73.0 7.0392 0.199 8.555 33.6934 1.51 65.9 34 74.0 7.0140 0.198 8.553 33.7085 1.50 65.4 25 75.0 7.0024 0.200 8.546 33.7174 1.51 65.6 26 76.0 6.9880 0.200 8.543 33.7303 1.49 65.0 33 77.0 6.9665 0.194 8.540 33.7490 1.46 63.5 27 78.0 6.9177 0.201 8.542 33.7797 1.46 63.3 28 79.0 6.8894 0.215 8.544 33.7929 1.45 62.8 26 80.0 6.8846 0.198 8.541 33.7947 1.45 62.9 21 81.0 6.8842 0.193 8.540 33.7957 1.47 64.1 19 82.0 6.8826 0.203 8.540 33.7967 1.56 67.8 23 83.0 6.8457 0.197 8.540 33.8117 1.67 72.6 29 84.0 6.7431 0.199 8.543 33.8504 1.75 76.1 39 85.0 6.6984 0.193 8.560 33.8654 1.78 77.6 25 86.0 6.6897 0.170 8.573 33.8681 1.78 77.5 19 87.0 6.6814 0.182 8.581 33.8709 1.79 77.7 18 88.0 6.6797 0.191 8.584 33.8718 1.79 77.7 26 89.0 6.6796 0.180 8.588 33.8721 1.79 77.7 22