*2014/04/24 14:15:46.48 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/13 21:43:47.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 55 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : BCB2889E NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5 59 2 Temperature:Primary 'deg C (ITS90)' 7.6952 13.9508 3 Fluorescence:URU:Wetlabs mg/m^3 0.278 33.2 4 pH:SBE:Nominal n/a 8.648 9.487 5 Salinity:T0:C0 PSS-78 31.3046 33.0147 6 Oxygen:Dissolved:SBE mL/L 2.453 8.341 7 Oxygen:Dissolved:SBE umol/kg 106.7589 363.8682 8 Number_of_bin_records n/a 15 69 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : VI04 EVENT NUMBER : 199 LATITUDE : 48 35.49000 N ! (deg min) LONGITUDE : 125 43.56000 W ! (deg min) WATER DEPTH : 64 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:26 4357 4357 CLEAN 5.1 2014/04/16 10:54:46 4357 4357 MERGEHDR 1.2 2014/04/16 14:30:52 4357 4357 SHIFTDAT 3.4 2014/04/16 16:44:06 4357 4357 SHIFTDAT 3.4 2014/04/16 17:28:08 4357 4357 SHIFTDAT 3.4 2014/04/17 09:41:45 4357 4357 DELETE 6.3 2014/04/17 10:07:09 4357 1559 CTDEDIT 5.0.4 2014/04/21 16:51:44 1559 1430 CALIB 11.8 2014/04/23 16:40:49 1430 1430 FILTERS 4.3 2014/04/23 17:27:50 1430 1430 BINAVE 4.1.1 2014/04/23 17:28:57 1430 55 REMOVECH 8.2 2014/04/23 17:30:24 55 55 CHGUNITS 3.1 2014/04/23 17:44:48 55 55 REORDER 1.3 2014/04/23 17:45:03 ? ? HDREDIT2 2.6 2014/04/24 14:15:46 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 49.54 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/21 16:51:44 129 records were deleted in this editing session. 61 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:24 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:46 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0199.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 13 2013 14:43:47 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: VI04 Depth(m): 64m System UTC = Jul 13 2013 21:43:47 # nquan = 15 # nvalues = 4357 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 4357 # span 1 = 2.056, 59.538 # span 2 = 7.6947, 14.0268 # span 3 = 7.6088, 13.9713 # span 4 = 3.410823, 3.799126 # span 5 = 3.410738, 3.801973 # span 6 = 0.1743, 53.5393 # span 7 = 1.2488, 3.6338 # span 8 = 8.637, 9.494 # span 9 = 0, 1 # span 10 = 31.2229, 33.0166 # span 11 = 31.2513, 33.1020 # span 12 = 2.23893, 8.40549 # span 13 = -1.338, 1.281 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 13 2013 21:43:47 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:07:48, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0199.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:48, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-019 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:25, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-01 99.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:40, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0199.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:01, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0199.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast ; salinity was cleaned heavily near the surface. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 13.9508 7.319 9.484 31.3181 8.34 363.9 15 6.0 13.6990 12.077 9.487 31.3163 8.12 354.3 23 7.0 13.2069 20.943 9.486 31.3153 7.83 341.5 28 8.0 13.0985 26.650 9.463 31.3135 7.39 322.2 32 9.0 13.0223 33.200 9.429 31.3128 7.04 307.3 25 10.0 12.9177 30.238 9.402 31.3093 6.88 300.2 22 11.0 12.6625 25.643 9.378 31.3046 6.70 292.0 22 12.0 12.4812 25.622 9.335 31.3135 6.21 270.7 25 13.0 12.3809 24.181 9.287 31.3147 5.36 233.8 29 14.0 12.2233 20.306 9.258 31.3216 4.82 210.0 26 15.0 11.1978 7.025 9.233 31.3544 4.67 203.4 21 16.0 10.3891 2.623 9.115 31.4810 4.60 200.3 23 17.0 10.2438 2.503 8.971 31.5090 4.51 196.6 29 18.0 10.0738 1.871 8.896 31.5395 4.40 192.0 32 19.0 10.0398 1.443 8.860 31.5466 4.29 187.2 23 20.0 9.9264 1.271 8.850 31.5906 4.24 184.8 21 21.0 9.8255 1.204 8.845 31.6385 4.18 182.2 20 22.0 9.7306 1.148 8.837 31.6808 4.08 177.8 25 23.0 9.6883 1.158 8.825 31.7006 3.92 170.7 32 24.0 9.5490 1.020 8.817 31.7759 3.81 165.9 25 25.0 9.3226 0.796 8.810 31.9068 3.75 163.5 20 26.0 9.2177 0.723 8.801 31.9496 3.71 161.8 22 27.0 9.1678 0.653 8.791 31.9767 3.69 160.5 27 28.0 9.0655 0.539 8.780 32.0242 3.65 159.1 35 29.0 9.0338 0.586 8.771 32.0428 3.61 157.2 25 30.0 9.0186 0.599 8.765 32.0556 3.58 155.7 20 31.0 9.0110 0.578 8.761 32.0647 3.54 154.3 22 32.0 8.9709 0.605 8.759 32.0911 3.50 152.6 23 33.0 8.9149 0.528 8.756 32.1197 3.42 149.0 29 34.0 8.8967 0.510 8.754 32.1281 3.34 145.6 24 35.0 8.7899 0.465 8.751 32.1908 3.29 143.3 22 36.0 8.6803 0.429 8.747 32.2602 3.27 142.6 23 37.0 8.6078 0.421 8.743 32.3073 3.25 141.6 28 38.0 8.5634 0.424 8.736 32.3376 3.24 141.1 29 39.0 8.5485 0.430 8.730 32.3465 3.21 139.7 26 40.0 8.5369 0.417 8.727 32.3569 3.16 137.4 23 41.0 8.5146 0.418 8.723 32.3698 3.09 134.7 22 42.0 8.4959 0.405 8.721 32.3952 3.03 131.9 25 43.0 8.3877 0.390 8.720 32.4716 2.96 129.0 27 44.0 8.3068 0.372 8.718 32.5320 2.85 124.1 25 45.0 8.2626 0.361 8.713 32.5687 2.71 118.1 23 46.0 8.1612 0.338 8.709 32.6390 2.61 113.8 24 47.0 7.9666 0.338 8.704 32.8074 2.58 112.1 24 48.0 7.8241 0.322 8.697 32.9211 2.55 111.1 32 49.0 7.7932 0.319 8.684 32.9446 2.53 110.2 28 50.0 7.7650 0.300 8.675 32.9658 2.51 109.2 25 51.0 7.7379 0.297 8.670 32.9826 2.49 108.5 23 52.0 7.7114 0.320 8.664 32.9990 2.49 108.4 19 53.0 7.7015 0.308 8.661 33.0051 2.49 108.3 28 54.0 7.7008 0.307 8.657 33.0062 2.48 107.8 29 55.0 7.6995 0.305 8.656 33.0078 2.47 107.7 26 56.0 7.6986 0.288 8.654 33.0090 2.46 107.2 21 57.0 7.6979 0.302 8.651 33.0100 2.47 107.4 26 58.0 7.6965 0.292 8.651 33.0122 2.46 107.0 28 59.0 7.6952 0.278 8.648 33.0147 2.45 106.8 69