*2014/04/24 14:15:46.28 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/13 16:01:21.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 89 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : EC5CB04 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 91 2 Temperature:Primary 'deg C (ITS90)' 7.4781 12.011 3 Fluorescence:URU:Wetlabs mg/m^3 0.25 19.857 4 pH:SBE:Nominal n/a 8.6 9.267 5 Salinity:T0:C0 PSS-78 31.3111 33.1742 6 Oxygen:Dissolved:SBE mL/L 2.219 6.257 7 Oxygen:Dissolved:SBE umol/kg 96.56013 272.857 8 Number_of_bin_records n/a 18 37 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : VI01 EVENT NUMBER : 190 LATITUDE : 48 50.41000 N ! (deg min) LONGITUDE : 125 16.09000 W ! (deg min) WATER DEPTH : 95 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:20 5900 5900 CLEAN 5.1 2014/04/16 10:54:40 5900 5900 MERGEHDR 1.2 2014/04/16 14:30:47 5900 5900 SHIFTDAT 3.4 2014/04/16 16:44:01 5900 5900 SHIFTDAT 3.4 2014/04/16 17:28:03 5900 5900 SHIFTDAT 3.4 2014/04/17 09:41:40 5900 5900 DELETE 6.3 2014/04/17 10:07:05 5900 2357 CTDEDIT 5.0.4 2014/04/21 16:08:16 2357 2318 CALIB 11.8 2014/04/23 16:40:46 2318 2318 FILTERS 4.3 2014/04/23 17:27:48 2318 2318 BINAVE 4.1.1 2014/04/23 17:28:56 2318 89 REMOVECH 8.2 2014/04/23 17:30:24 89 89 CHGUNITS 3.1 2014/04/23 17:44:48 89 89 REORDER 1.3 2014/04/23 17:45:03 ? ? HDREDIT2 2.6 2014/04/24 14:15:46 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 81.78 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/21 16:08:16 39 records were deleted in this editing session. 16 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:46 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:24 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:46 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0190.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 13 2013 09:01:21 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: VI01 Depth(m): 95m System UTC = Jul 13 2013 16:01:21 # nquan = 15 # nvalues = 5900 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 5850 # span 1 = 2.003, 91.782 # span 2 = 7.4745, 12.6617 # span 3 = 7.3890, 12.4631 # span 4 = 3.408483, 3.659093 # span 5 = 3.408654, 3.655357 # span 6 = 0.1743, 21.7139 # span 7 = 1.1744, 3.0709 # span 8 = 8.580, 9.284 # span 9 = 0, 1 # span 10 = 31.1367, 33.1781 # span 11 = 31.2273, 33.2635 # span 12 = 2.01673, 7.17240 # span 13 = -1.293, 1.286 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 13 2013 16:01:21 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:07:45, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg3_12-20JUL\20 13-43-0190.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:47, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-019 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:23, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-01 90.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:39, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0190.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:44:00, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0190.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top of the cast salinity was cleaned lightly. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 12.0110 19.857 9.267 31.3111 6.26 272.9 19 4.0 11.6106 19.469 9.240 31.4304 5.89 256.8 24 5.0 11.1079 16.719 9.200 31.5615 5.46 237.8 24 6.0 10.7759 15.369 9.152 31.6480 5.25 228.6 19 7.0 10.5431 12.115 9.098 31.6955 5.10 222.4 26 8.0 10.2885 10.393 9.045 31.7595 4.94 215.2 34 9.0 10.1416 7.701 8.985 31.7955 4.85 211.2 31 10.0 10.0173 6.232 8.954 31.8261 4.81 209.6 23 11.0 9.9920 5.822 8.930 31.8338 4.79 208.7 21 12.0 9.9652 5.765 8.910 31.8431 4.78 208.3 21 13.0 9.9485 5.543 8.896 31.8502 4.76 207.2 28 14.0 9.9461 5.626 8.886 31.8529 4.73 206.0 37 15.0 9.9397 5.529 8.882 31.8549 4.71 205.4 25 16.0 9.9284 5.272 8.878 31.8577 4.69 204.3 21 17.0 9.9276 5.401 8.877 31.8601 4.64 202.4 23 18.0 9.9202 5.229 8.876 31.8645 4.53 197.5 26 19.0 9.9041 5.287 8.874 31.8724 4.36 189.8 31 20.0 9.7928 4.791 8.873 31.9049 4.29 187.0 31 21.0 9.6529 3.427 8.862 31.9382 4.24 184.7 33 22.0 9.6400 3.191 8.839 31.9414 4.18 182.3 27 23.0 9.6011 2.886 8.828 31.9460 4.12 179.7 25 24.0 9.5744 2.692 8.820 31.9469 4.10 178.5 22 25.0 9.5226 2.306 8.814 31.9569 4.08 177.6 29 26.0 9.4841 2.233 8.805 31.9712 4.03 175.4 32 27.0 9.4745 2.155 8.796 31.9802 3.95 172.0 26 28.0 9.4520 2.076 8.792 32.0046 3.87 168.7 19 29.0 9.3602 1.777 8.790 32.0343 3.78 164.9 18 30.0 9.3225 1.845 8.785 32.0459 3.69 160.9 25 31.0 9.2119 1.519 8.780 32.0754 3.62 157.7 32 32.0 9.0886 1.184 8.770 32.0964 3.57 155.4 34 33.0 9.0159 0.928 8.755 32.1356 3.52 153.4 23 34.0 8.9881 1.006 8.743 32.1628 3.48 151.8 21 35.0 8.9568 0.943 8.737 32.1789 3.46 150.7 23 36.0 8.8985 0.881 8.732 32.1841 3.43 149.4 32 37.0 8.8591 0.751 8.727 32.1874 3.42 148.8 33 38.0 8.8345 0.685 8.721 32.1907 3.41 148.7 24 39.0 8.7939 0.620 8.716 32.2244 3.36 146.5 23 40.0 8.8542 0.786 8.711 32.2646 3.32 144.7 30 41.0 8.7579 0.632 8.714 32.2954 3.31 144.3 33 42.0 8.7372 0.620 8.711 32.3064 3.30 143.9 26 43.0 8.7305 0.626 8.706 32.3205 3.25 141.3 21 44.0 8.7287 0.651 8.703 32.3343 3.16 137.5 23 45.0 8.6818 0.612 8.703 32.3576 3.06 133.3 29 46.0 8.5602 0.510 8.701 32.4031 2.90 126.4 33 47.0 8.4756 0.391 8.692 32.4346 2.80 121.9 22 48.0 8.3527 0.310 8.683 32.5023 2.75 119.9 21 49.0 8.2459 0.272 8.674 32.5642 2.75 119.5 22 50.0 8.1808 0.255 8.663 32.6048 2.74 119.2 32 51.0 8.1473 0.262 8.651 32.6325 2.73 119.1 32 52.0 8.1387 0.282 8.644 32.6421 2.73 118.9 24 53.0 8.1345 0.284 8.640 32.6461 2.74 119.2 21 54.0 8.1300 0.271 8.640 32.6509 2.74 119.4 28 55.0 8.1138 0.293 8.639 32.6702 2.74 119.3 29 56.0 8.0897 0.306 8.638 32.7004 2.73 118.8 25 57.0 8.0769 0.293 8.639 32.7149 2.73 119.1 25 58.0 8.0571 0.291 8.641 32.7248 2.74 119.3 26 59.0 8.0521 0.261 8.642 32.7322 2.74 119.3 25 60.0 8.0530 0.320 8.641 32.7342 2.73 118.8 25 61.0 8.0486 0.308 8.642 32.7432 2.72 118.5 22 62.0 8.0347 0.332 8.644 32.7494 2.71 118.0 25 63.0 8.0198 0.303 8.644 32.7574 2.71 118.0 32 64.0 8.0032 0.287 8.643 32.7695 2.72 118.3 27 65.0 7.9940 0.275 8.642 32.7794 2.71 118.1 21 66.0 7.9855 0.260 8.641 32.7888 2.73 118.8 23 67.0 7.9728 0.292 8.640 32.7996 2.72 118.6 26 68.0 7.9638 0.279 8.641 32.8062 2.72 118.3 30 69.0 7.9596 0.283 8.642 32.8094 2.71 117.7 27 70.0 7.9485 0.300 8.642 32.8180 2.70 117.4 23 71.0 7.9316 0.288 8.643 32.8302 2.69 117.3 23 72.0 7.9178 0.282 8.642 32.8410 2.69 117.0 27 73.0 7.9082 0.274 8.640 32.8484 2.67 116.0 26 74.0 7.9040 0.297 8.639 32.8517 2.62 114.0 24 75.0 7.8836 0.279 8.640 32.8675 2.54 110.6 29 76.0 7.8438 0.275 8.640 32.8988 2.49 108.4 26 77.0 7.7880 0.264 8.636 32.9385 2.46 106.9 23 78.0 7.7151 0.267 8.633 32.9932 2.45 106.7 26 79.0 7.6974 0.271 8.627 33.0060 2.44 106.3 28 80.0 7.6833 0.250 8.620 33.0164 2.44 106.1 29 81.0 7.6811 0.270 8.617 33.0182 2.43 105.8 26 82.0 7.6791 0.276 8.615 33.0201 2.43 105.6 21 83.0 7.6774 0.265 8.614 33.0216 2.42 105.3 21 84.0 7.6736 0.273 8.613 33.0249 2.41 104.8 24 85.0 7.6741 0.270 8.610 33.0249 2.39 104.1 28 86.0 7.6635 0.261 8.610 33.0332 2.35 102.5 26 87.0 7.6421 0.261 8.608 33.0495 2.29 99.7 25 88.0 7.6299 0.268 8.609 33.0586 2.24 97.5 24 89.0 7.5497 0.281 8.609 33.1204 2.23 96.9 25 90.0 7.4971 0.272 8.605 33.1598 2.22 96.6 26 91.0 7.4781 0.290 8.600 33.1742 2.22 96.6 24