*2014/04/24 14:15:45.56 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/10 18:09:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 69 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 60858C07 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 72 2 Temperature:Primary 'deg C (ITS90)' 11.4798 15.2327 3 Fluorescence:URU:Wetlabs mg/m^3 2.882 8.86 4 pH:SBE:Nominal n/a 8.93 9.379 5 Salinity:T0:C0 PSS-78 25.9681 29.7353 6 Oxygen:Dissolved:SBE mL/L 5.216 7.923 7 Oxygen:Dissolved:SBE umol/kg 227.7123 347.1188 8 Number_of_bin_records n/a 11 35 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS38 EVENT NUMBER : 161 LATITUDE : 47 53.90000 N ! (deg min) LONGITUDE : 122 30.42000 W ! (deg min) WATER DEPTH : 77 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:49:03 3959 3959 CLEAN 5.1 2014/04/16 10:54:22 3959 3959 MERGEHDR 1.2 2014/04/16 14:30:30 3959 3959 SHIFTDAT 3.4 2014/04/16 16:43:43 3959 3959 SHIFTDAT 3.4 2014/04/16 17:27:46 3959 3959 SHIFTDAT 3.4 2014/04/17 09:41:23 3959 3959 DELETE 6.3 2014/04/17 10:06:52 3959 1849 CTDEDIT 5.0.4 2014/04/21 14:50:42 1849 1836 CALIB 11.8 2014/04/23 16:40:39 1836 1836 FILTERS 4.3 2014/04/23 17:27:41 1836 1836 BINAVE 4.1.1 2014/04/23 17:28:52 1836 69 REMOVECH 8.2 2014/04/23 17:30:24 69 69 CHGUNITS 3.1 2014/04/23 17:44:47 69 69 REORDER 1.3 2014/04/23 17:45:02 ? ? HDREDIT2 2.6 2014/04/24 14:15:45 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 62.17 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/21 14:50:42 13 records were deleted in this editing session. 28 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:39 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:24 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:45 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0161.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 10 2013 11:09:02 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: GS38 Depth(m): 61m System UTC = Jul 10 2013 18:09:02 # nquan = 15 # nvalues = 3959 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 3959 # span 1 = 2.028, 72.165 # span 2 = 11.4736, 15.2666 # span 3 = 11.3855, 15.1792 # span 4 = 3.262196, 3.429252 # span 5 = 3.262326, 3.429564 # span 6 = 1.8568, 14.5393 # span 7 = 2.2039, 3.2748 # span 8 = 8.905, 9.390 # span 9 = 0, 1 # span 10 = 25.6615, 29.7372 # span 11 = 25.7250, 29.8099 # span 12 = 4.81533, 7.39801 # span 13 = -1.093, 1.061 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 10 2013 18:09:02 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:08:55, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg2_07-11JUL\20 13-43-0161.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:43, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-016 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:19, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-01 61.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:35, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0161.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:43:54, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0161.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the bottom of the cast; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 15.2327 8.483 9.379 25.9681 7.92 347.1 35 5.0 15.2106 7.891 9.377 25.9755 7.58 332.3 33 6.0 15.1825 8.563 9.376 26.0001 6.88 301.6 26 7.0 15.1355 8.860 9.375 26.0525 6.39 279.8 28 8.0 14.6155 7.880 9.377 26.6945 6.14 268.8 25 9.0 13.2624 7.283 9.377 28.3127 6.01 262.8 22 10.0 12.8366 6.498 9.314 28.7858 5.87 256.6 26 11.0 12.5030 5.009 9.228 28.9783 5.74 250.8 24 12.0 12.3257 5.765 9.164 29.1193 5.65 246.9 26 13.0 12.0613 4.472 9.119 29.3177 5.61 245.1 26 14.0 11.8678 3.924 9.090 29.4534 5.59 244.1 26 15.0 11.8069 3.628 9.059 29.4977 5.57 243.0 27 16.0 11.7930 3.695 9.032 29.5093 5.52 241.1 26 17.0 11.7620 3.652 9.016 29.5332 5.49 239.7 26 18.0 11.7313 3.375 9.007 29.5594 5.48 239.3 25 19.0 11.7031 3.804 9.000 29.5805 5.47 239.0 27 20.0 11.6931 3.135 8.994 29.5895 5.46 238.4 26 21.0 11.6890 3.312 8.988 29.5929 5.44 237.4 25 22.0 11.6851 3.619 8.984 29.5960 5.44 237.4 26 23.0 11.6787 3.478 8.980 29.6012 5.42 236.9 26 24.0 11.6730 3.432 8.977 29.6102 5.41 236.4 26 25.0 11.6720 3.409 8.975 29.6227 5.40 235.7 27 26.0 11.6705 3.304 8.975 29.6397 5.38 234.9 26 27.0 11.6423 3.390 8.975 29.6552 5.37 234.6 25 28.0 11.6107 3.206 8.975 29.6585 5.36 234.1 24 29.0 11.5896 3.223 8.972 29.6613 5.34 233.2 26 30.0 11.5821 3.300 8.969 29.6711 5.33 232.9 25 31.0 11.5681 3.225 8.967 29.6880 5.34 233.3 26 32.0 11.5692 3.321 8.963 29.6898 5.34 233.0 27 33.0 11.5668 3.302 8.962 29.6927 5.32 232.4 27 34.0 11.5642 3.224 8.961 29.6955 5.32 232.1 26 35.0 11.5650 3.338 8.959 29.6949 5.31 231.7 24 36.0 11.5558 3.522 8.958 29.6894 5.29 231.0 19 37.0 11.5405 3.035 8.958 29.6966 5.29 231.1 24 38.0 11.5260 3.047 8.957 29.7083 5.28 230.4 25 39.0 11.5180 3.212 8.954 29.7118 5.27 229.9 27 40.0 11.5121 3.084 8.952 29.7147 5.26 229.8 25 41.0 11.5061 3.262 8.951 29.7181 5.25 229.2 29 42.0 11.5027 2.962 8.948 29.7210 5.25 229.4 27 43.0 11.4984 3.149 8.947 29.7266 5.25 229.2 26 44.0 11.4981 3.116 8.946 29.7317 5.24 228.7 27 45.0 11.4958 3.211 8.944 29.7325 5.23 228.5 28 46.0 11.4931 3.272 8.943 29.7328 5.23 228.3 26 47.0 11.4927 3.166 8.942 29.7322 5.23 228.1 27 48.0 11.4893 3.102 8.942 29.7321 5.22 227.7 29 49.0 11.4878 3.040 8.940 29.7315 5.22 227.9 28 50.0 11.4836 3.245 8.940 29.7318 5.23 228.3 27 51.0 11.4824 3.062 8.939 29.7318 5.22 227.7 29 52.0 11.4824 2.917 8.938 29.7317 5.23 228.4 26 53.0 11.4829 3.007 8.938 29.7316 5.23 228.3 25 54.0 11.4827 3.500 8.936 29.7318 5.23 228.2 26 55.0 11.4807 2.882 8.935 29.7318 5.24 228.5 28 56.0 11.4798 3.206 8.934 29.7320 5.22 228.0 26 57.0 11.4823 3.273 8.934 29.7329 5.22 228.0 29 58.0 11.4860 3.348 8.934 29.7336 5.23 228.3 28 59.0 11.4895 3.132 8.934 29.7349 5.24 228.6 25 60.0 11.4946 3.161 8.934 29.7353 5.23 228.5 28 61.0 11.4964 2.959 8.934 29.7351 5.23 228.5 27 62.0 11.4996 3.082 8.934 29.7338 5.24 228.8 26 63.0 11.5046 3.065 8.934 29.7324 5.24 228.8 26 64.0 11.5086 3.246 8.934 29.7313 5.23 228.5 27 65.0 11.5085 3.227 8.934 29.7310 5.23 228.5 26 66.0 11.5080 3.066 8.933 29.7310 5.23 228.2 30 67.0 11.5062 3.622 8.934 29.7314 5.23 228.4 28 68.0 11.5053 3.357 8.933 29.7314 5.23 228.5 26 69.0 11.5037 3.327 8.933 29.7317 5.23 228.4 29 70.0 11.5046 3.207 8.932 29.7317 5.22 228.0 27 71.0 11.5054 3.459 8.931 29.7317 5.24 228.8 26 72.0 11.5048 3.251 8.930 29.7317 5.24 228.9 11