*2014/04/24 14:15:44.98 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/05 19:36:35.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 58 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : ADDF8CA3 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 60 2 Temperature:Primary 'deg C (ITS90)' 9.6171 16.4551 3 Fluorescence:URU:Wetlabs mg/m^3 0.387 2.807 4 pH:SBE:Nominal n/a 8.639 9.277 5 Salinity:T0:C0 PSS-78 22.5411 29.5238 6 Oxygen:Dissolved:SBE mL/L 3.461 7.368 7 Oxygen:Dissolved:SBE umol/kg 151.0781 323.3462 8 Number_of_bin_records n/a 21 46 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS28 EVENT NUMBER : 141 LATITUDE : 49 0.43000 N ! (deg min) LONGITUDE : 123 43.93000 W ! (deg min) WATER DEPTH : 65 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:48:38 4289 4289 CLEAN 5.1 2014/04/16 10:54:08 4289 4289 MERGEHDR 1.2 2014/04/16 14:30:16 4289 4289 SHIFTDAT 3.4 2014/04/16 16:43:29 4289 4289 SHIFTDAT 3.4 2014/04/16 17:27:33 4289 4289 SHIFTDAT 3.4 2014/04/17 09:41:07 4289 4289 DELETE 6.3 2014/04/17 10:06:41 4289 1527 CTDEDIT 5.0.4 2014/04/21 13:28:55 1527 1506 CALIB 11.8 2014/04/23 16:40:32 1506 1506 FILTERS 4.3 2014/04/23 17:27:34 1506 1506 BINAVE 4.1.1 2014/04/23 17:28:48 1506 58 REMOVECH 8.2 2014/04/23 17:30:23 58 58 CHGUNITS 3.1 2014/04/23 17:44:47 58 58 REORDER 1.3 2014/04/23 17:45:01 ? ? HDREDIT2 2.6 2014/04/24 14:15:44 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 50.33 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/21 13:28:55 21 records were deleted in this editing session. 24 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:32 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:23 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:44 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0141.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 05 2013 12:36:35 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: GS28 Depth(m): 65m System UTC = Jul 05 2013 19:36:35 # nquan = 15 # nvalues = 4289 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 4289 # span 1 = 2.046, 60.329 # span 2 = 9.6161, 16.5299 # span 3 = 9.5300, 16.4300 # span 4 = 2.983306, 3.249227 # span 5 = 2.983127, 3.249126 # span 6 = 0.3012, 4.7616 # span 7 = 1.5920, 3.0513 # span 8 = 8.625, 9.281 # span 9 = 0, 1 # span 10 = 22.5010, 29.5271 # span 11 = 22.5502, 29.5980 # span 12 = 3.18833, 7.11638 # span 13 = -1.196, 1.128 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 05 2013 19:36:35 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:09:48, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg1_26JUN-06JUL \2013-43-0141.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:39, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-014 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:16, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-01 41.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:32, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0141.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:43:50, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0141.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 16.4551 2.733 9.263 22.5411 6.46 284.0 39 4.0 16.3097 2.807 9.266 22.6693 6.99 306.9 29 5.0 15.1045 2.048 9.269 23.7055 7.37 323.3 26 6.0 15.1950 1.824 9.229 24.3594 7.27 318.8 21 7.0 15.1299 1.641 9.233 25.1742 7.06 309.6 25 8.0 14.5859 1.666 9.275 25.4501 6.71 294.3 24 9.0 14.3417 1.459 9.277 25.8731 6.48 283.7 24 10.0 13.7070 1.311 9.270 26.2728 6.36 278.6 24 11.0 13.1476 1.214 9.248 26.5763 6.10 267.1 25 12.0 12.9471 1.170 9.202 26.7011 5.45 238.6 25 13.0 12.8601 1.158 9.161 26.8191 4.86 212.5 23 14.0 12.5528 0.950 9.130 27.0289 4.58 200.6 24 15.0 11.8595 0.905 9.105 27.5419 4.46 194.9 24 16.0 11.5570 0.818 9.039 27.7698 4.37 191.2 24 17.0 11.3730 0.885 8.966 27.9155 4.33 189.2 24 18.0 11.1857 0.933 8.908 28.1322 4.31 188.5 24 19.0 11.1039 0.969 8.860 28.2095 4.30 188.1 24 20.0 11.0289 0.940 8.826 28.2746 4.25 185.8 24 21.0 10.8971 0.902 8.805 28.3678 4.20 183.5 25 22.0 10.7722 0.864 8.796 28.5089 4.17 182.2 23 23.0 10.6751 0.845 8.791 28.6331 4.14 180.7 24 24.0 10.6325 0.827 8.786 28.6949 4.10 179.2 24 25.0 10.6088 0.826 8.780 28.7413 4.06 177.3 24 26.0 10.5815 0.798 8.774 28.7756 4.01 175.3 25 27.0 10.5140 0.773 8.769 28.8614 3.99 174.1 25 28.0 10.4181 0.744 8.764 28.9451 3.96 172.9 25 29.0 10.3657 0.703 8.758 28.9958 3.94 171.9 26 30.0 10.3084 0.707 8.751 29.0396 3.89 169.9 27 31.0 10.2626 0.711 8.744 29.0732 3.85 168.3 25 32.0 10.2063 0.640 8.740 29.1020 3.83 167.4 26 33.0 10.1139 0.636 8.735 29.1625 3.84 167.5 26 34.0 10.0736 0.574 8.729 29.2104 3.82 166.8 25 35.0 10.0697 0.596 8.720 29.2358 3.82 166.7 26 36.0 10.0168 0.621 8.716 29.2469 3.81 166.2 25 37.0 9.9950 0.635 8.712 29.2714 3.80 165.7 25 38.0 10.0046 0.632 8.707 29.2775 3.77 164.5 25 39.0 9.9826 0.710 8.705 29.2938 3.75 163.6 26 40.0 9.9394 0.831 8.704 29.3405 3.72 162.5 26 41.0 9.9350 0.858 8.700 29.3590 3.70 161.6 25 42.0 9.8347 0.856 8.698 29.3680 3.71 162.0 26 43.0 9.7916 0.777 8.694 29.3810 3.69 161.2 23 44.0 9.7837 0.716 8.690 29.3852 3.68 160.7 24 45.0 9.7751 0.727 8.685 29.3968 3.67 160.1 24 46.0 9.7406 0.727 8.682 29.4036 3.66 159.8 26 47.0 9.7042 0.793 8.678 29.4055 3.66 159.8 26 48.0 9.6817 0.823 8.674 29.4102 3.66 159.6 22 49.0 9.6701 0.849 8.672 29.4181 3.64 158.9 28 50.0 9.6692 0.837 8.669 29.4261 3.62 158.2 26 51.0 9.6677 0.815 8.668 29.4364 3.60 156.9 25 52.0 9.6824 0.722 8.668 29.4541 3.54 154.4 27 53.0 9.6750 0.622 8.667 29.4710 3.52 153.5 26 54.0 9.6580 0.553 8.667 29.4766 3.50 152.6 24 55.0 9.6407 0.486 8.664 29.4840 3.47 151.5 28 56.0 9.6391 0.484 8.657 29.4885 3.46 151.1 26 57.0 9.6224 0.400 8.653 29.4912 3.48 152.0 25 58.0 9.6171 0.387 8.650 29.4938 3.51 153.3 27 59.0 9.6466 0.421 8.643 29.5127 3.54 154.3 46 60.0 9.6683 0.444 8.639 29.5238 3.54 154.4 31