*2014/04/24 14:15:44.93 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/07/05 15:46:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 67 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : D7282134 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 69 2 Temperature:Primary 'deg C (ITS90)' 9.2134 13.1654 3 Fluorescence:URU:Wetlabs mg/m^3 0.283 3.203 4 pH:SBE:Nominal n/a 8.609 8.949 5 Salinity:T0:C0 PSS-78 26.3742 30.2438 6 Oxygen:Dissolved:SBE mL/L 3.444 5.723 7 Oxygen:Dissolved:SBE umol/kg 150.2443 250.4637 8 Number_of_bin_records n/a 6 42 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS27 EVENT NUMBER : 137 LATITUDE : 48 42.09000 N ! (deg min) LONGITUDE : 123 29.41000 W ! (deg min) WATER DEPTH : 72 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:48:36 5543 5543 CLEAN 5.1 2014/04/16 10:54:07 5543 5543 MERGEHDR 1.2 2014/04/16 14:30:15 5543 5543 SHIFTDAT 3.4 2014/04/16 16:43:28 5543 5543 SHIFTDAT 3.4 2014/04/16 17:27:31 5543 5543 SHIFTDAT 3.4 2014/04/17 09:41:06 5543 5543 DELETE 6.3 2014/04/17 10:06:40 5543 1667 CTDEDIT 5.0.4 2014/04/21 13:26:25 1667 1662 CALIB 11.8 2014/04/23 16:40:31 1662 1662 FILTERS 4.3 2014/04/23 17:27:34 1662 1662 BINAVE 4.1.1 2014/04/23 17:28:48 1662 67 REMOVECH 8.2 2014/04/23 17:30:23 67 67 CHGUNITS 3.1 2014/04/23 17:44:47 67 67 REORDER 1.3 2014/04/23 17:45:01 ? ? HDREDIT2 2.6 2014/04/24 14:15:44 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 58.93 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/21 13:26:25 5 records were deleted in this editing session. 109 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:31 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:23 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:44 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0137.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 05 2013 08:46:37 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: GS27 Depth(m): 72m System UTC = Jul 05 2013 15:46:37 # nquan = 15 # nvalues = 5543 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 5543 # span 1 = 2.098, 68.930 # span 2 = 9.1658, 13.2740 # span 3 = 9.1209, 13.1894 # span 4 = 3.170640, 3.330828 # span 5 = 3.171621, 3.330963 # span 6 = 0.2219, 4.5393 # span 7 = 1.5823, 2.4408 # span 8 = 8.598, 8.956 # span 9 = 0, 1 # span 10 = 26.2085, 30.2474 # span 11 = 26.2813, 30.3210 # span 12 = 3.17282, 5.39515 # span 13 = -1.254, 1.265 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 05 2013 15:46:37 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:09:47, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg1_26JUN-06JUL \2013-43-0137.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:39, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-013 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:16, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-01 37.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:31, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0137.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:43:49, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0137.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top of the cast; salinity was cleaned. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 13.1466 3.203 8.948 26.3742 5.70 249.6 19 4.0 13.0924 3.015 8.949 26.7364 5.72 250.2 42 5.0 13.0848 2.489 8.944 26.8479 5.72 250.5 40 6.0 13.1654 1.570 8.938 27.0685 5.55 243.1 29 7.0 13.1440 1.471 8.937 27.4375 5.34 233.6 25 8.0 12.8734 1.398 8.941 27.7169 5.22 228.5 32 9.0 12.3246 1.354 8.949 27.8795 5.21 227.6 26 10.0 12.0908 1.354 8.946 28.1082 5.23 228.6 24 11.0 12.0056 1.277 8.932 28.1822 5.26 230.0 25 12.0 11.9507 1.252 8.914 28.2493 5.28 230.7 26 13.0 11.9149 1.304 8.897 28.3018 5.28 230.9 25 14.0 11.9007 1.309 8.888 28.3252 5.30 231.9 26 15.0 11.8951 1.289 8.884 28.3385 5.34 233.6 24 16.0 11.8945 1.320 8.880 28.3485 5.38 235.3 24 17.0 11.8941 1.293 8.879 28.3533 5.18 226.5 25 18.0 11.8798 1.396 8.880 28.4682 4.78 209.1 24 19.0 11.7065 1.453 8.883 28.7476 4.57 199.5 24 20.0 11.3950 1.152 8.886 28.9251 4.51 197.2 25 21.0 10.9791 0.979 8.879 29.0786 4.51 197.2 24 22.0 10.9355 0.921 8.850 29.0933 4.50 196.7 24 23.0 10.9439 0.830 8.811 29.1135 4.46 194.7 24 24.0 10.8509 0.840 8.785 29.1455 4.43 193.5 24 25.0 10.8081 0.792 8.772 29.1673 4.36 190.3 24 26.0 10.7530 0.749 8.767 29.1802 4.26 185.9 25 27.0 10.4179 0.590 8.765 29.2528 4.21 183.8 24 28.0 10.3273 0.565 8.754 29.2988 4.20 183.5 24 29.0 10.2640 0.508 8.740 29.3418 4.21 183.9 25 30.0 10.1859 0.510 8.727 29.3780 4.19 182.9 26 31.0 10.1081 0.509 8.719 29.3964 4.16 181.5 25 32.0 10.0180 0.469 8.714 29.4353 4.18 182.7 24 33.0 10.0086 0.450 8.709 29.4663 4.12 179.8 25 34.0 9.9015 0.423 8.705 29.4897 4.08 178.1 25 35.0 9.8611 0.410 8.701 29.5503 4.06 177.1 21 36.0 10.0190 0.468 8.696 29.6136 4.03 175.9 25 37.0 10.0058 0.478 8.692 29.6087 4.04 176.3 25 38.0 10.0535 0.496 8.691 29.6224 4.03 175.9 24 39.0 10.0473 0.471 8.690 29.6211 3.99 174.3 24 40.0 10.0331 0.468 8.691 29.6177 3.95 172.3 24 41.0 10.0961 0.516 8.690 29.6310 3.93 171.4 25 42.0 10.1387 0.535 8.689 29.6455 3.91 170.7 25 43.0 10.0241 0.446 8.690 29.6898 3.90 170.1 25 44.0 9.9564 0.400 8.688 29.6892 3.87 168.7 24 45.0 9.9118 0.385 8.684 29.6960 3.84 167.6 24 46.0 9.8249 0.362 8.682 29.7351 3.83 167.1 25 47.0 9.7942 0.392 8.678 29.8251 3.82 166.7 24 48.0 9.8027 0.390 8.672 29.8389 3.79 165.5 24 49.0 9.7871 0.387 8.670 29.8681 3.76 164.0 24 50.0 9.7636 0.390 8.666 29.8763 3.73 162.6 23 51.0 9.7545 0.376 8.662 29.8942 3.70 161.5 22 52.0 9.6460 0.361 8.662 29.9254 3.67 160.1 20 53.0 9.6044 0.371 8.656 29.9913 3.64 158.7 22 54.0 9.6036 0.379 8.651 30.0302 3.60 157.3 24 55.0 9.5885 0.388 8.646 30.0787 3.60 157.1 25 56.0 9.5107 0.334 8.643 30.1111 3.61 157.3 23 57.0 9.4227 0.318 8.639 30.1088 3.62 157.8 26 58.0 9.2975 0.283 8.634 30.0865 3.60 157.2 26 59.0 9.3090 0.297 8.627 30.0899 3.57 155.9 25 60.0 9.3056 0.283 8.622 30.0955 3.56 155.5 24 61.0 9.2629 0.299 8.619 30.1037 3.57 155.9 26 62.0 9.2134 0.312 8.615 30.1215 3.58 156.2 23 63.0 9.2522 0.302 8.612 30.1321 3.58 156.0 23 64.0 9.2930 0.316 8.609 30.1475 3.56 155.4 26 65.0 9.3326 0.310 8.609 30.1587 3.51 153.0 24 66.0 9.3812 0.342 8.611 30.1718 3.47 151.5 24 67.0 9.4484 0.401 8.612 30.1977 3.45 150.7 26 68.0 9.4338 0.393 8.614 30.2285 3.44 150.2 22 69.0 9.4152 0.368 8.615 30.2438 3.44 150.2 6