*2014/04/24 14:15:43.32 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/06/29 23:43:41.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 89 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : F7043D74 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 90 2 Temperature:Primary 'deg C (ITS90)' 8.3171 16.6532 3 Fluorescence:URU:Wetlabs mg/m^3 0.218 1.967 4 pH:SBE:Nominal n/a 8.484 9.402 5 Salinity:T0:C0 PSS-78 18.6396 30.2207 6 Oxygen:Dissolved:SBE mL/L 3.326 7.277 7 Oxygen:Dissolved:SBE umol/kg 145.1038 320.6418 8 Number_of_bin_records n/a 5 123 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-43\Pro $END *ADMINISTRATION MISSION : 2013-43 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Salmon Marine Interactions SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : GS10 EVENT NUMBER : 53 LATITUDE : 49 53.84000 N ! (deg min) LONGITUDE : 124 38.94000 W ! (deg min) WATER DEPTH : 100 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1438 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/04/16 10:47:48 7213 7213 CLEAN 5.1 2014/04/16 10:53:17 7213 7213 MERGEHDR 1.2 2014/04/16 14:29:29 7213 7213 SHIFTDAT 3.4 2014/04/16 16:42:39 7213 7213 SHIFTDAT 3.4 2014/04/16 17:26:42 7213 7213 SHIFTDAT 3.4 2014/04/17 09:40:16 7213 7213 DELETE 6.3 2014/04/17 10:06:00 7213 2543 CTDEDIT 5.0.4 2014/04/17 16:19:07 2543 2487 CALIB 11.8 2014/04/23 16:40:08 2487 2487 FILTERS 4.3 2014/04/23 17:27:13 2487 2487 BINAVE 4.1.1 2014/04/23 17:28:37 2487 89 REMOVECH 8.2 2014/04/23 17:30:22 89 89 CHGUNITS 3.1 2014/04/23 17:44:45 89 89 REORDER 1.3 2014/04/23 17:45:00 ? ? HDREDIT2 2.6 2014/04/24 14:15:43 ? ? $END $REMARKS -CLEAN functions: 2014/04/16 10:52:53 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 80.21 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/04/17 16:19:07 56 records were deleted in this editing session. 30 changes in channel Salinity:T0:C0 -CALIB parameters: 2014/04/23 16:40:08 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4180000E-01 0.1070600E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/04/23 17:30:22 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Salinity:T1:C1 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature* Salinity reference channel: Salinity:* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2014/04/24 14:15:43 Applied edit header: P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-43\2013-43-0053.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 29 2013 16:43:41 SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-43 Station: GS10 Depth(m): 100m System UTC = Jun 29 2013 23:43:41 # nquan = 15 # nvalues = 7213 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 13 = dz/dtM: Descent Rate [m/s], WS = 1 # name 14 = flag: flag # span 0 = 1, 7213 # span 1 = 1.938, 90.205 # span 2 = 8.3159, 16.7068 # span 3 = 8.2306, 16.6112 # span 4 = 2.469706, 3.208171 # span 5 = 2.478159, 3.208080 # span 6 = 0.1425, 4.2695 # span 7 = 1.5237, 3.0171 # span 8 = 8.458, 9.409 # span 9 = 0, 1 # span 10 = 18.1959, 30.2226 # span 11 = 18.3132, 30.2944 # span 12 = 3.05631, 6.85165 # span 13 = -1.118, 2.736 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 29 2013 23:43:41 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99998000 # -1.50650 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1438 # 02-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.5380e-001 # -0.5130 # -1.7303e-003 # 7.3264e-005 # -1.4010e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.3800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # June-19-2013 # 1.30000000e+001 # # 0.0159 # # # # # # 0851 # 29-May-12 # 4.5412 # 2.4967 # # # # # # # # # # # # # datcnv_date = Apr 16 2014 09:09:27, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-43\RAW\CTD\2013-43_Leg1_26JUN-06JUL \2013-43-0053.hex P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Apr 16 2014 09:10:28, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-43\Processing\convert\2013-43-005 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Apr 16 2014 10:02:04, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-43\Processing\wildedit\2013-43-00 53.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Apr 16 2014 10:42:20, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-43\Processing\align\2013-43-0053.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 7.0000, 7.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 16 2014 10:43:34, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2013-43\Processing\celltm\2013-43-0053.c nv P:\Cruise_Data_Processing\2013-43\Processing\doc\2013-43-ctd-post.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 1 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. The salinity calibration samples were lost. There are large differences between the 2 salinity and temperature channels. Post-cruise conductivity sensor calibrations showed no significant drift in those sensors, but there was no post-cruise information available for the temperature sensors at the time of initial processing. The secondary temperature sensor malfunctioned during an earlier cruise, so the primary temperature and salinity were selected for archiving. Salinity was not recalibrated, but recalibration will be applied later if the factory report on the primary temperature sensor indicates it is necessary. There was no calibration sampling for dissolved oxygen, but the results of a comparison with titrated samples during cruise 2013-16 was used to recalibrate the Dissolve Oxygen concentration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2013-43-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.418E-01 1.0706) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 2.0 16.6291 1.857 9.402 18.6396 7.22 318.1 5 3.0 16.6261 1.860 9.398 18.7633 7.28 320.6 37 4.0 16.6224 1.912 9.383 18.8774 7.21 317.4 34 5.0 16.6532 1.952 9.378 19.3950 6.70 295.1 34 6.0 16.5400 1.688 9.377 20.4515 6.36 279.9 29 7.0 16.3400 1.493 9.375 21.4238 6.15 270.4 22 8.0 16.2829 1.197 9.355 21.6835 5.99 263.1 23 9.0 15.7519 1.075 9.332 22.9428 5.83 256.2 22 10.0 15.4932 1.123 9.292 23.4550 5.70 250.3 26 11.0 15.0740 0.980 9.247 24.3880 5.56 244.0 26 12.0 14.6028 1.453 9.208 24.9368 5.38 236.0 25 13.0 14.1620 1.773 9.172 25.3287 5.13 224.7 26 14.0 13.8438 1.725 9.138 25.5999 4.88 213.7 26 15.0 13.2157 1.967 9.115 26.2338 4.68 204.8 25 16.0 12.5299 1.809 9.090 26.8920 4.58 200.4 25 17.0 11.6246 1.796 9.057 27.5892 4.52 197.7 26 18.0 11.2591 1.964 9.015 27.8841 4.45 194.4 25 19.0 11.0444 1.042 8.958 28.0219 4.39 192.0 26 20.0 10.7043 0.707 8.909 28.2445 4.31 188.3 26 21.0 10.5971 0.634 8.871 28.3173 4.13 180.7 26 22.0 10.5264 0.635 8.839 28.3697 3.98 173.9 26 23.0 10.1015 0.619 8.813 28.6605 3.91 170.9 26 24.0 9.6789 0.637 8.789 28.9823 3.89 169.7 27 25.0 9.5180 0.562 8.761 29.1249 3.85 168.0 25 26.0 9.4651 0.519 8.734 29.1775 3.80 165.8 25 27.0 9.4398 0.470 8.707 29.2033 3.74 163.3 26 28.0 9.3300 0.377 8.684 29.3136 3.69 160.9 20 29.0 9.2451 0.376 8.664 29.3956 3.66 159.7 27 30.0 9.1907 0.365 8.648 29.4623 3.65 159.1 22 31.0 9.1423 0.342 8.633 29.5155 3.64 158.8 24 32.0 9.1402 0.332 8.621 29.5200 3.63 158.4 26 33.0 9.1398 0.357 8.609 29.5225 3.61 157.7 26 34.0 9.1362 0.342 8.601 29.5289 3.60 156.9 26 35.0 9.1153 0.349 8.595 29.5565 3.59 156.6 26 36.0 9.0922 0.329 8.590 29.5841 3.58 156.0 25 37.0 9.0861 0.338 8.584 29.5917 3.56 155.4 25 38.0 9.0756 0.328 8.581 29.6041 3.55 154.8 26 39.0 9.0606 0.343 8.576 29.6204 3.53 154.2 25 40.0 9.0394 0.320 8.573 29.6423 3.52 153.8 24 41.0 9.0295 0.317 8.570 29.6527 3.51 153.1 26 42.0 8.9939 0.309 8.567 29.6878 3.49 152.2 25 43.0 8.9749 0.302 8.564 29.7058 3.48 152.0 27 44.0 8.9443 0.291 8.561 29.7353 3.46 151.1 26 45.0 8.9236 0.294 8.557 29.7567 3.45 150.5 28 46.0 8.9086 0.302 8.554 29.7721 3.44 149.9 26 47.0 8.8700 0.305 8.552 29.8048 3.44 149.9 25 48.0 8.8410 0.285 8.548 29.8245 3.44 149.9 25 49.0 8.7965 0.288 8.546 29.8532 3.43 149.8 26 50.0 8.7616 0.279 8.542 29.8746 3.43 149.6 25 51.0 8.7527 0.279 8.538 29.8804 3.42 149.3 26 52.0 8.7320 0.274 8.533 29.8974 3.41 148.9 26 53.0 8.7193 0.257 8.530 29.9169 3.41 148.8 26 54.0 8.7203 0.286 8.526 29.9192 3.40 148.5 26 55.0 8.7163 0.273 8.525 29.9202 3.39 147.8 26 56.0 8.7163 0.275 8.521 29.9265 3.38 147.6 26 57.0 8.7094 0.265 8.520 29.9388 3.37 147.2 25 58.0 8.6979 0.266 8.518 29.9541 3.37 147.0 26 59.0 8.6787 0.256 8.516 29.9710 3.37 146.8 25 60.0 8.6564 0.248 8.516 29.9872 3.37 146.8 26 61.0 8.6389 0.242 8.515 29.9999 3.37 146.9 25 62.0 8.6313 0.249 8.511 30.0076 3.36 146.6 24 63.0 8.6288 0.267 8.510 30.0111 3.36 146.5 27 64.0 8.6279 0.259 8.507 30.0138 3.35 146.2 26 65.0 8.6282 0.252 8.506 30.0152 3.33 145.1 25 66.0 8.6214 0.256 8.506 30.0258 3.33 145.1 26 67.0 8.6120 0.238 8.504 30.0372 3.34 145.9 25 68.0 8.5900 0.247 8.503 30.0591 3.36 146.5 24 69.0 8.5226 0.238 8.501 30.0960 3.37 147.1 22 70.0 8.5034 0.244 8.500 30.1056 3.38 147.6 25 71.0 8.4819 0.246 8.497 30.1151 3.39 148.0 25 72.0 8.4645 0.238 8.497 30.1227 3.39 148.1 26 73.0 8.4613 0.233 8.497 30.1243 3.39 148.0 23 74.0 8.4538 0.235 8.498 30.1287 3.39 148.1 26 75.0 8.4512 0.250 8.495 30.1310 3.40 148.4 25 76.0 8.4463 0.242 8.494 30.1349 3.40 148.4 22 77.0 8.4377 0.246 8.494 30.1403 3.42 149.0 25 78.0 8.4365 0.223 8.493 30.1407 3.42 149.0 25 79.0 8.4281 0.245 8.493 30.1424 3.42 149.2 18 80.0 8.4123 0.231 8.493 30.1483 3.41 148.7 26 81.0 8.4090 0.226 8.493 30.1526 3.40 148.4 26 82.0 8.4160 0.229 8.493 30.1557 3.40 148.3 25 83.0 8.4101 0.227 8.492 30.1625 3.42 149.1 33 84.0 8.3826 0.233 8.490 30.1840 3.43 149.7 38 85.0 8.3449 0.227 8.489 30.2005 3.44 150.3 44 86.0 8.3295 0.239 8.489 30.2104 3.45 150.4 21 87.0 8.3212 0.234 8.488 30.2169 3.45 150.6 57 88.0 8.3171 0.228 8.488 30.2200 3.45 150.5 61 89.0 8.3176 0.224 8.485 30.2202 3.45 150.4 123 90.0 8.3173 0.218 8.484 30.2207 3.45 150.5 36