*2016/07/14 15:26:12.07 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/06/04 20:02:38.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 52 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : BE9F944A NUMBER OF CHANNELS : 9 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 5 56 2 Temperature:Primary 'deg C (ITS90)' 7.9971 11.4499 3 Transmissivity %/metre 30.6 59.5 4 Fluorescence:URU:Seapoint mg/m^3 0.528 2.619 5 PAR uE/m^2/sec 0.103 259.544 6 Salinity:T0:C0 PSS-78 29.688 32.6176 7 Oxygen:Dissolved:SBE mL/L 4.683 8.588 8 Oxygen:Dissolved:SBE umol/kg 203.8837 374.9323 9 Number_of_bin_records n/a 8 50 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-38\Pro $END *ADMINISTRATION MISSION : 2013-38 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : CS07 EVENT NUMBER : 122 LATITUDE : 51 4.49000 N ! (deg min) LONGITUDE : 128 44.16000 W ! (deg min) WATER DEPTH : 65 ALTIMETER (M) : 10.43 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0434 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2668 Conductivity:2 ' ' 2754 Fluorometer:Seapoint ' ' 2228 'Oxygen:SBE 43' ' ' 0997 'Transmissometer:WET Labs C-Star' ' ' 1396 Altimeter ' ' 1204 PAR/Irradiance:Biospherical/Licor ' ' 4601 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/10/11 14:43:33 5679 5679 CLEAN 5.1 2013/10/11 15:21:26 5679 5679 SHIFTDAT 3.4 2013/10/11 15:48:31 5679 5679 SHIFTDAT 3.4 2013/10/11 18:16:04 5679 5679 SHIFTDAT 3.4 2013/10/11 18:31:08 5679 5679 DELETE 6.3 2013/10/11 18:42:35 5679 1624 CTDEDIT 4.61 2013/10/24 12:13:48 1624 1210 CALIB 11.7 2013/10/24 13:40:49 1210 1210 FILTERS 4.3 2013/10/24 15:59:19 1210 1210 BINAVE 4.1.1 2013/10/24 16:02:49 1210 52 REMOVECH 8.1.1 2013/10/24 17:10:15 52 52 CHGUNITS 3.0 2013/10/24 17:11:03 52 52 REORDER 1.3 2013/10/24 17:11:30 ? ? HDREDIT2 2.6 2013/10/24 17:14:48 ? ? HDREDIT2 2.6 2013/12/23 08:37:52 ? ? HDREDIT2 3.0.2 2016/07/14 15:26:12 ? ? $END $REMARKS -CLEAN functions: 2013/10/11 15:06:26 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 46.13 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/10/24 12:13:48 414 records were deleted in this editing session. 23 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/10/24 13:40:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-38\Processing\doc\2013-38-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Oxygen:Dissolved:SBE mL/L 10 0.1720000E-01 0.1047100E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/10/24 17:10:15 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/10/24 17:14:48 Applied edit header: P:\Cruise_Data_Processing\2013-38\Processing\doc\2013-38-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 4: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 6: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -HEADER EDITS: 2013/12/23 08:37:52 Channel 6: Salinity:T0:C0 [PSS-78] Name: Salinity:Practical:T0:C0 ==> Salinity:T0:C0 -HEADER EDITS: 2016/07/14 15:26:12 Applied edit header: P:\Cruise_Data_Processing\2013-FL\2013-HDR-FL.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = E:\Data\2013-38\2013-38-0122.hex Software Version Seasave V 7.22.4 Temperature SN = 2023 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 04 2013 13:02:14 NMEA Latitude = 51 04.49 N NMEA Longitude = 128 44.16 W NMEA UTC (Time) = Jun 04 2013 20:02:38 Store Lat/Lon Data = Append to Every Scan Ship: J P Tully Cruise: 2013-38 Depth: 65 Station: CS07 System UTC = Jun 04 2013 20:02:14 # nquan = 17 # nvalues = 5679 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = dz/dtM: Descent Rate [m/s] # name 11 = pumps: Pump Status # name 12 = altM: Altimeter [m] # name 13 = sal00: Salinity, Practical [PSU] # name 14 = sal11: Salinity, Practical, 2 [PSU] # name 15 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 16 = flag: flag # span 0 = 1, 5679 # span 1 = 0.308, 56.135 # span 2 = 7.9935, 11.4974 # span 3 = 7.9890, 11.4695 # span 4 = 0.445202, 3.506095 # span 5 = 0.192161, 3.509301 # span 6 = 0.0000, 87.9494 # span 7 = 0.0000e+00, 3.2601e+00 # span 8 = 2.0024, 3.5067 # span 9 = 9.1795e-02, 2.5638e+03 # span 10 = -2.314, 1.520 # span 11 = 0, 1 # span 12 = 0.00, 100.00 # span 13 = 3.2843, 32.6198 # span 14 = 1.3471, 32.6213 # span 15 = 4.45190, 8.56806 # span 16 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 04 2013 20:02:38 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2023 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.11056177e-003 # 6.24714349e-004 # 1.97891287e-005 # 1.88702998e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00955037e+001 # 1.35324049e+000 # -2.33974617e-003 # 2.26260145e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 23-Mar-13 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99985327 # 3.73990 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2668 # 01-Feb-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35639086e-003 # 6.48643105e-004 # 2.44567925e-005 # 2.40597452e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05984808e+001 # 1.61542018e+000 # -2.38112540e-003 # 2.73092331e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 2228 # # # 2 # 0.000 # # # # # # # # # 0997 # 16-Feb-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4081e-001 # -0.4850 # -2.4308e-003 # 1.3327e-004 # -2.5567e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.5900 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1396 # Jan 31st 2013 # 18.8463 # 0.0000 # 0.250 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # 4601 # 16-Mar-11 # 1.00000000 # 0.00000000 # 4219409282.69999980 # 1.00000000 # -0.34320000 # # # # # # # datcnv_date = Oct 09 2013 15:50:28, 7.22.5 [datcnv_vars = 13] # datcnv_in = P:\Cruise_Data_Processing\2013-38\RAW\CTD\2013-38-0122.hex P:\Crui se_Data_Processing\2013-38\Processing\doc\2013-38-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 09 2013 15:55:01, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-38\Processing\convert\2013-38-012 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 11 2013 11:30:44, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-38\Processing\wildedit\2013-38-01 22.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 11 2013 13:29:40, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-38\Processing\align\2013-38-0122.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 11 2013 13:35:06, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-38\Processing\celltm\2013-38-0122.c nv P:\Cruise_Data_Processing\2013-38\Processing\doc\2013-38-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* The descent rate of the CTD was very noisy. CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity, fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The Oxygen:Dissolved:SBE data are considered, roughly, to be: ±0.6mL/L from 0 to 30db ±0.3mL/L from 30db to 150db ±0.2mL/L from 150db to 500db ±0.03mL/L below 500db For details on the processing see processing report: 2013-38-proc.doc. WARNING: SeaPoint Fluorometer #2228 malfunctioned during the latter half of 2013. There were large values at great depth that got steadily higher through the year until it was removed from service. The data have been left in the file so researchers can see the shape of the profile. Comparison with extracted chlorophyll is recommended. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.172E-01 1.0471) $END !--1--- ---2---- --3-- ---4--- --5--- ---6---- --7--- --8-- -9-- !Pressu Temperat Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 5.0 11.4499 38.4 0.932 259.5 29.6880 8.59 374.9 19 6.0 11.3147 37.5 1.139 191.4 29.7615 8.47 369.7 24 7.0 10.9780 36.1 1.440 141.9 30.0480 7.88 343.7 25 8.0 10.7158 35.3 2.376 112.5 30.9796 7.17 312.7 24 9.0 10.5979 30.7 2.254 89.9 31.3698 6.97 304.0 19 10.0 10.2028 30.6 2.123 68.6 31.5209 6.99 304.6 19 11.0 9.7703 34.5 2.217 51.5 31.6906 7.04 307.0 26 12.0 9.6976 39.1 2.619 42.6 31.7212 7.01 305.7 10 13.0 9.5521 42.6 1.758 30.4 31.7607 6.52 284.3 22 14.0 9.4999 42.8 1.757 26.9 31.7879 6.52 284.1 20 15.0 9.4142 41.6 1.824 22.5 31.8201 6.50 283.3 16 16.0 9.4292 41.4 1.536 18.3 31.8409 6.45 281.1 17 17.0 9.4981 46.8 1.456 14.6 31.8784 6.37 277.6 20 18.0 9.5226 45.9 1.358 11.6 31.9094 6.24 271.7 31 19.0 9.4078 46.7 1.394 9.7 31.9160 6.04 263.1 50 20.0 9.2035 47.0 1.192 8.7 31.9054 5.84 254.5 34 21.0 9.0342 48.4 1.191 7.7 31.9522 5.76 250.8 31 22.0 8.9071 47.3 1.396 6.7 32.0042 5.75 250.7 24 23.0 8.8579 44.3 1.329 5.6 32.0175 5.76 250.8 23 24.0 8.8033 45.7 1.589 4.5 32.0353 5.77 251.3 31 25.0 8.7871 45.6 1.816 3.7 32.0443 5.79 252.3 43 26.0 8.7838 46.3 1.444 3.2 32.0560 5.83 253.7 27 27.0 8.7970 47.7 1.208 2.9 32.0769 5.82 253.4 22 28.0 8.8356 50.6 1.215 2.5 32.1117 5.78 251.9 20 29.0 8.8620 53.0 1.049 2.1 32.1446 5.73 249.4 23 30.0 8.8640 54.0 0.953 1.9 32.1595 5.67 247.0 13 31.0 8.7591 53.4 0.913 1.7 32.2186 5.38 234.2 30 32.0 8.6631 52.9 0.880 1.5 32.2608 5.35 233.0 17 33.0 8.5799 52.3 0.901 1.3 32.2955 5.33 232.2 16 34.0 8.5195 49.8 0.924 1.1 32.3221 5.29 230.4 21 35.0 8.4444 48.9 1.038 1.0 32.3493 5.24 228.2 9 36.0 8.3740 49.5 1.007 0.8 32.3635 5.20 226.3 31 37.0 8.3296 50.7 0.916 0.8 32.3686 5.18 225.5 25 38.0 8.2981 51.4 0.886 0.7 32.3740 5.17 225.2 24 39.0 8.2655 53.9 0.832 0.7 32.3817 5.17 224.9 23 40.0 8.2464 54.0 0.816 0.6 32.3875 5.15 224.3 21 41.0 8.2420 54.8 0.856 0.5 32.3894 5.14 223.8 22 42.0 8.2278 55.5 0.811 0.5 32.3992 5.13 223.5 8 43.0 8.2050 55.4 0.772 0.4 32.4192 5.10 222.3 18 44.0 8.1992 55.6 0.794 0.3 32.4255 5.10 222.0 18 45.0 8.1996 55.7 0.801 0.3 32.4259 5.09 221.7 21 46.0 8.1972 55.7 0.767 0.3 32.4313 5.06 220.2 21 47.0 8.1969 56.0 0.747 0.3 32.4325 5.00 217.7 22 48.0 8.1943 56.0 0.737 0.2 32.4362 4.96 216.2 20 49.0 8.1694 56.2 0.709 0.2 32.4774 4.95 215.4 23 50.0 8.1531 56.3 0.693 0.2 32.4914 4.93 214.7 13 51.0 8.1281 57.4 0.650 0.2 32.5126 4.80 209.2 40 52.0 8.0959 57.5 0.640 0.1 32.5357 4.73 206.1 23 53.0 8.0692 57.5 0.630 0.1 32.5554 4.70 204.8 22 54.0 8.0270 57.9 0.605 0.1 32.5863 4.69 204.4 27 55.0 8.0035 59.5 0.540 0.1 32.6146 4.68 203.9 30 56.0 7.9971 59.5 0.528 0.1 32.6176 4.68 204.0 15