*2014/11/20 09:58:35.72 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/05/18 11:24:51.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 12 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 78436924 NUMBER OF CHANNELS : 17 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle:Firing_Sequence n/a 1 12 2 Bottle_Number n/a 1 12 3 Pressure decibar 2.315 199.166 4 Temperature:Primary 'deg C (ITS90)' 7.7882 13.0145 5 Transmissivity %/metre 31 56.3 6 Fluorescence:URU:Seapoint mg/m^3 0.154 1.333 7 PAR uE/m^2/sec 0 0.79E-01 8 pH:SBE:Nominal n/a 8.118 9.099 9 Salinity:T0:C0 PSS-78 20.8437 32.7202 10 Oxygen:Dissolved:SBE mL/L 1.29 9.815 11 Oxygen:Dissolved:SBE umol/kg 56.2 428.5 12 Number_of_bin_records n/a 121 121 13 Sample_Number n/a 1 12 14 Temperature:Draw 'deg C (ITS90)' 7.9 12.9 15 Oxygen:Dissolved mL/L 1.44 9.87 16 Oxygen:Dissolved umol/kg 62.70346 430.8268 17 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 8 F ' ' 3 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 ' ' ' ' 5 I I 0 13 -99 ' ' 5 I I 0 14 -99 ' ' 6 F R4 1 15 -99 ' ' 8 F R4 3 16 -99 ' ' 6 F ' ' 1 17 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2013-36 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : WCVI & Northern Inlet Moorings SCIENTIST : Kulin I. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : EFF 05 EVENT NUMBER : 28 LATITUDE : 49 2.54000 N ! (deg min) LONGITUDE : 125 9.17000 W ! (deg min) WATER DEPTH : 202 ALTIMETER (M) : 3.52 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 3321 'Pressure:Digiquartz with TC' ' ' 77511 Temperature:2 ' ' 4700 Conductivity:2 ' ' 1766 Fluorometer:Seapoint ' ' 2228 'Oxygen:SBE 43' ' ' 1438 'Transmissometer:WET Labs C-Star' ' ' 1396 Altimeter ' ' ' ' pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4601 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------ ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/01/18 14:54:50 1452 1452 CLEAN 5.1 2014/01/18 14:55:13 ? ? ADDSAMP 3.6 2014/01/20 17:26:11 1452 1452 BINAVE 4.1.1 2014/01/20 17:26:23 1452 12 MERGE 3.5 2014/01/20 17:28:53 12 12 CLEAN 5.1 2014/01/22 15:22:15 12 12 CALIB 11.8 2014/01/22 15:22:55 12 12 SORT 3.6 2014/01/25 15:55:57 12 12 REMOVECH 8.2 2014/01/25 15:56:29 12 12 CHGUNITS 3.1 2014/01/25 15:58:34 12 12 CHGUNITS 3.1 2014/01/25 15:59:12 12 12 REORDER 1.3 2014/01/25 15:59:57 ? ? HDREDIT2 2.6 2014/01/27 11:34:08 ? ? CHANGE_FLAGS 2.0 2014/11/20 09:58:35 12 12 $END $REMARKS -CLEAN functions: 2014/01/18 14:55:04 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2013-36\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2014/01/20 17:28:53 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2013-36\Processing\hydro\2013-36-0028.samavg Secondary file: P:\Cruise_Data_Processing\2013-36\Processing\hydro\2013-36-0028.mrgcln1s -SORT parameters: 2014/01/20 17:25:40 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2014/01/22 15:22:14 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2014/01/22 15:22:55 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-36\Processing\doc\2013-36-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Oxygen:Dissolved:SBE mL/L 10 0.3000000E-01 0.1072200E+01 -SORT parameters: 2014/01/25 15:55:57 Sorted in ascending order of channel Pressure -REMOVECH 2014/01/25 15:56:29 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary [deg C (ITS90)] Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw [ ] Salinity reference channel: Sal* 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2014/01/27 11:34:08 Applied edit header: P:\Cruise_Data_Processing\2013-36\Processing\doc\HYDRO\2013-36-bot-hdr.txt Channel 1: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 10: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 14: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Format: F7.2 ==> F6.1 Channel 15: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 17: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 8: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS Sample_Number 2: OXY: No plot was displayed. Titration ended at a transmissivity <40%. Endpoint likely to be overshot. Analysis methods: ----------------- Oxygen samples were analyzed at sea on an automated Winkler titration system (Brinkmann Dosimat model 665 for titrations, Dosimat model 865 for dispensing standards and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2013-36OXY*.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Based on the recommendation from SeaBird, the method for calibration of Dissolved Oxygen concentration was changed from that used for 2011 and some 2012 cruises. For more information see the SeaBird Application Note #64-2, June 2012 revision. The dissolved oxygen analyst reported that the precision was relatively low (0.040mL/L) even after removal of known bad values and outliers selected by the Chauvenet criterion. Based on the analyst's recommendation, the data are reported with only 2 decimal places in mL/L and one decimal places in umol/kg. There was no salinity calibration sampling during this cruise, but cruises before and after this one had the same equipment and salinity was found to be within 0.001 of bottle samples. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2013-36-proc.doc. Note: The files from cruises 2013-35 and 2013-36 were processed together.) --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.3E-01 1.0722) $END !1- 2- --3--- ---4---- --5-- ---6--- --7--- ---8--- ---9---- --10-- --11- -12- -13- --14- ---15-- --16- 17 !Bo Bo Pressu Temperat Trans Fluores PAR pH:SBE: Salinity Oxygen Oxyge Numb Samp Tempe Oxygen: Oxyge Fl !tt tt re ure: missi cence: Nominal :T0:C0 : n: er_o le_ ratur Dissolv n: ag !~u ~u Primary vity URU: Dissol Disso ~bin Numb e: ed Disso ~o !en mb Seapoin ved: lved: _rec er Draw lved lv !ce er t SBE SBE ords ed !-- -- ------ -------- ----- ------- ------ ------- -------- ------ ----- ---- ---- ----- ------- ----- -- *END OF HEADER 12 12 2.3 13.0145 31.0 1.329 0.1 9.099 20.8437 8.53 374.9 121 12 12.9 8.190 360.1 0 11 11 5.1 11.6769 51.9 0.370 0.0 9.025 29.7945 9.81 428.5 121 11 10.9 9.870 430.8 0 10 10 9.8 10.2182 56.3 0.265 0.0 8.975 31.0646 9.69 422.5 121 10 9.7 9.540 415.9 0 9 9 19.9 9.1784 56.2 0.429 0.0 8.616 31.5723 7.04 307.0 121 9 9.1 6.650 289.8 0 8 8 30.2 8.6539 45.9 1.333 0.0 8.304 31.9343 3.47 151.2 121 8 8.7 3.090 134.6 0 7 7 49.9 8.1973 49.8 0.544 0.0 8.118 32.4200 1.29 56.2 121 7 8.1 1.440 62.7 0 6 6 75.3 7.8916 47.8 0.367 0.0 8.157 32.6378 1.89 82.2 121 6 8.0 1.710 74.4 0 5 5 100.3 7.9345 52.5 0.715 0.0 8.134 32.6924 1.56 68.0 121 5 8.1 1.500 65.3 0 4 4 124.8 7.9069 52.1 0.222 0.0 8.145 32.7082 1.63 71.0 121 4 8.1 1.600 69.7 0 3 3 150.1 7.8231 51.6 0.173 0.0 8.194 32.7026 2.07 90.1 121 3 7.9 2.090 91.0 0 2 2 175.1 7.7882 50.9 0.154 0.0 8.205 32.7018 2.23 96.9 121 2 8.0 2.770 120.6 4 1 1 199.2 7.8759 45.0 0.171 0.0 8.129 32.7202 1.50 65.3 121 1 8.0 1.600 69.7 0