*2013/12/16 15:39:14.80 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/14 22:35:26.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 103 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A7D1690F NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5 107 2 Temperature:Primary 'deg C (ITS90)' 7.4591 7.5414 3 Fluorescence:URU:Wetlabs mg/m^3 0.582 0.683 4 Salinity:T0:C0 PSS-78 31.1667 31.6582 5 Oxygen:Dissolved:SBE mL/L 5.319 5.574 6 Oxygen:Dissolved:SBE umol/kg 231.7258 242.9266 7 Number_of_bin_records n/a 5 37 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : QCST 16 EVENT NUMBER : 162 LATITUDE : 50 36.69000 N ! (deg min) LONGITUDE : 126 52.25000 W ! (deg min) WATER DEPTH : 114 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:34:17 7335 7335 CLEAN 5.1 2013/06/27 09:36:35 7335 7335 SHIFTDAT 3.4 2013/06/27 11:08:57 7335 7335 SHIFTDAT 3.4 2013/06/27 12:26:28 7335 7335 SHIFTDAT 3.4 2013/06/27 12:28:56 7335 7335 DELETE 6.3 2013/06/27 12:44:31 7335 2660 CTDEDIT 4.61 2013/06/29 15:03:09 2660 2577 CALIB 11.7 2013/06/29 15:09:08 2577 2577 FILTERS 4.3 2013/06/29 15:14:05 2577 2577 BINAVE 4.1.1 2013/06/29 15:14:42 2577 103 REMOVECH 8.1.1 2013/06/29 15:15:08 103 103 CHGUNITS 3.0 2013/06/29 15:28:24 103 103 REORDER 1.3 2013/06/29 15:57:27 ? ? HDREDIT2 2.6 2013/06/29 15:58:15 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:14 103 103 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 97.54 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/29 15:03:09 83 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2013/06/29 15:09:08 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:08 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:15 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0162.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 14 2013 15:34:16 NMEA Latitude = 50 36.69 N NMEA Longitude = 126 52.25 W NMEA UTC (Time) = Mar 14 2013 22:35:26 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: QCST 16 Depth(m): 114 System UTC = Mar 14 2013 15:34:16 # nquan = 14 # nvalues = 7335 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 7335 # span 1 = 2.527, 107.535 # span 2 = 7.4587, 7.5550 # span 3 = 7.3494, 7.4446 # span 4 = 3.219567, 3.267127 # span 5 = 3.219699, 3.267180 # span 6 = 0.4603, 1.0794 # span 7 = 1.9037, 2.3493 # span 8 = 0, 1 # span 9 = -1.128, 1.225 # span 10 = 31.1118, 31.6616 # span 11 = 31.2123, 31.7624 # span 12 = 3.99586, 5.34013 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 14 2013 22:35:26 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:48, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0162.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:38:09, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-016 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:38, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-01 62.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:42, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0162.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:17:03, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0162.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some near-surface records. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 7.5414 0.683 31.1667 5.57 242.7 5 6.0 7.5414 0.655 31.1673 5.57 242.7 24 7.0 7.5409 0.664 31.1719 5.57 242.7 25 8.0 7.5407 0.660 31.1745 5.57 242.8 24 9.0 7.5402 0.642 31.1786 5.57 242.8 24 10.0 7.5397 0.641 31.1821 5.57 242.7 25 11.0 7.5399 0.657 31.1821 5.57 242.9 25 12.0 7.5403 0.658 31.1802 5.57 242.9 26 13.0 7.5402 0.648 31.1811 5.57 242.9 25 14.0 7.5404 0.664 31.1806 5.57 242.8 25 15.0 7.5409 0.652 31.1788 5.57 242.7 24 16.0 7.5400 0.649 31.1838 5.57 242.5 26 17.0 7.5368 0.655 31.2029 5.56 242.4 24 18.0 7.5358 0.643 31.2089 5.56 242.4 24 19.0 7.5362 0.654 31.2072 5.56 242.4 24 20.0 7.5362 0.658 31.2084 5.56 242.3 23 21.0 7.5363 0.637 31.2095 5.56 242.1 25 22.0 7.5365 0.644 31.2092 5.56 242.2 25 23.0 7.5356 0.640 31.2161 5.55 242.0 24 24.0 7.5345 0.652 31.2230 5.55 242.0 25 25.0 7.5324 0.648 31.2325 5.55 241.8 26 26.0 7.5316 0.658 31.2369 5.55 241.7 25 27.0 7.5307 0.648 31.2416 5.54 241.6 24 28.0 7.5291 0.653 31.2499 5.55 241.7 25 29.0 7.5277 0.629 31.2564 5.54 241.6 24 30.0 7.5286 0.653 31.2529 5.55 241.7 24 31.0 7.5283 0.652 31.2547 5.55 241.8 25 32.0 7.5284 0.662 31.2547 5.55 241.9 24 33.0 7.5287 0.643 31.2536 5.55 241.8 25 34.0 7.5287 0.652 31.2540 5.54 241.4 26 35.0 7.5293 0.645 31.2517 5.53 241.0 26 36.0 7.5279 0.652 31.2586 5.53 241.0 26 37.0 7.5252 0.639 31.2718 5.53 240.9 25 38.0 7.5241 0.627 31.2773 5.53 240.8 25 39.0 7.5241 0.626 31.2776 5.52 240.6 25 40.0 7.5219 0.636 31.2881 5.52 240.6 26 41.0 7.5199 0.591 31.2981 5.51 240.3 26 42.0 7.5180 0.604 31.3070 5.51 240.1 25 43.0 7.5174 0.632 31.3105 5.51 240.0 19 44.0 7.5164 0.636 31.3155 5.50 239.9 26 45.0 7.5166 0.627 31.3151 5.50 239.7 24 46.0 7.5147 0.621 31.3254 5.49 239.3 26 47.0 7.5131 0.624 31.3339 5.49 239.2 27 48.0 7.5106 0.611 31.3469 5.49 239.3 26 49.0 7.5085 0.608 31.3572 5.49 239.1 24 50.0 7.5078 0.617 31.3611 5.49 239.1 26 51.0 7.5081 0.600 31.3602 5.49 239.1 25 52.0 7.5082 0.618 31.3605 5.49 239.0 24 53.0 7.5071 0.617 31.3661 5.48 238.8 26 54.0 7.5068 0.620 31.3678 5.48 238.9 24 55.0 7.5067 0.619 31.3687 5.48 238.7 25 56.0 7.5073 0.614 31.3668 5.47 238.5 27 57.0 7.5045 0.631 31.3802 5.47 238.4 17 58.0 7.5035 0.632 31.3852 5.47 238.3 25 59.0 7.5038 0.635 31.3839 5.47 238.4 27 60.0 7.5037 0.623 31.3851 5.47 238.5 26 61.0 7.5032 0.613 31.3873 5.47 238.6 25 62.0 7.5028 0.640 31.3891 5.47 238.4 25 63.0 7.5022 0.631 31.3919 5.47 238.3 25 64.0 7.5022 0.615 31.3922 5.47 238.4 23 65.0 7.5022 0.633 31.3926 5.47 238.2 26 66.0 7.5020 0.629 31.3939 5.46 238.1 23 67.0 7.5022 0.630 31.3937 5.46 238.1 24 68.0 7.5021 0.623 31.3941 5.47 238.2 26 69.0 7.5022 0.631 31.3943 5.47 238.2 23 70.0 7.5022 0.612 31.3945 5.47 238.2 24 71.0 7.5025 0.626 31.3940 5.47 238.2 26 72.0 7.5024 0.629 31.3948 5.46 238.0 24 73.0 7.5024 0.627 31.3951 5.46 238.1 24 74.0 7.5024 0.631 31.3955 5.46 238.1 26 75.0 7.5022 0.633 31.3969 5.46 238.1 23 76.0 7.5022 0.609 31.3976 5.46 238.1 25 77.0 7.5022 0.629 31.3987 5.47 238.2 25 78.0 7.5019 0.629 31.4018 5.46 238.1 24 79.0 7.5015 0.634 31.4047 5.46 238.1 25 80.0 7.5016 0.620 31.4049 5.46 238.0 26 81.0 7.5020 0.624 31.4030 5.46 238.0 24 82.0 7.5014 0.619 31.4071 5.46 237.9 27 83.0 7.5012 0.614 31.4083 5.45 237.7 26 84.0 7.5010 0.605 31.4102 5.45 237.6 23 85.0 7.5004 0.626 31.4139 5.45 237.7 27 86.0 7.5000 0.622 31.4169 5.46 237.7 27 87.0 7.4998 0.622 31.4187 5.45 237.7 24 88.0 7.4995 0.608 31.4206 5.45 237.6 27 89.0 7.4996 0.624 31.4209 5.45 237.4 27 90.0 7.4997 0.634 31.4211 5.45 237.5 25 91.0 7.4996 0.628 31.4223 5.45 237.3 26 92.0 7.4996 0.615 31.4229 5.44 237.2 27 93.0 7.4992 0.616 31.4250 5.44 237.1 26 94.0 7.4985 0.633 31.4297 5.43 236.8 25 95.0 7.4968 0.630 31.4413 5.42 236.3 28 96.0 7.4950 0.597 31.4516 5.40 235.4 26 97.0 7.4921 0.604 31.4685 5.38 234.6 25 98.0 7.4855 0.592 31.5064 5.37 233.8 28 99.0 7.4793 0.594 31.5419 5.34 232.6 26 100.0 7.4743 0.595 31.5702 5.33 232.1 24 101.0 7.4659 0.592 31.6173 5.32 231.9 27 102.0 7.4605 0.602 31.6490 5.32 231.8 28 103.0 7.4598 0.600 31.6538 5.32 231.8 25 104.0 7.4594 0.586 31.6566 5.32 231.8 24 105.0 7.4591 0.598 31.6582 5.32 231.8 24 106.0 7.4594 0.582 31.6574 5.32 231.8 37 107.0 7.4596 0.593 31.6573 5.32 231.7 11