*2013/12/16 15:39:14.36 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/11 14:51:16.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 84 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : C7591DC NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5 88 2 Temperature:Primary 'deg C (ITS90)' 8.3107 8.4969 3 Fluorescence:URU:Wetlabs mg/m^3 0.49 1.151 4 Salinity:T0:C0 PSS-78 26.9725 30.1339 5 Oxygen:Dissolved:SBE mL/L 5.279 5.812 6 Oxygen:Dissolved:SBE umol/kg 230.3577 254.1465 7 Number_of_bin_records n/a 6 41 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : IVI 12 EVENT NUMBER : 108 LATITUDE : 50 34.62000 N ! (deg min) LONGITUDE : 127 31.41000 W ! (deg min) WATER DEPTH : 94 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:33:48 6829 6829 CLEAN 5.1 2013/06/27 09:36:07 6829 6829 SHIFTDAT 3.4 2013/06/27 11:08:29 6829 6829 SHIFTDAT 3.4 2013/06/27 12:26:02 6829 6829 SHIFTDAT 3.4 2013/06/27 12:28:30 6829 6829 DELETE 6.3 2013/06/27 12:44:11 6829 2288 CTDEDIT 4.61 2013/06/29 14:14:39 2288 2195 CALIB 11.7 2013/06/29 15:08:54 2195 2195 FILTERS 4.3 2013/06/29 15:13:53 2195 2195 BINAVE 4.1.1 2013/06/29 15:14:36 2195 84 REMOVECH 8.1.1 2013/06/29 15:15:07 84 84 CHGUNITS 3.0 2013/06/29 15:28:23 84 84 REORDER 1.3 2013/06/29 15:57:26 ? ? HDREDIT2 2.6 2013/06/29 15:58:14 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:14 84 84 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 78.38 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/29 14:14:39 93 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2013/06/29 15:08:54 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:07 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:14 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0108.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 11 2013 07:50:21 NMEA Latitude = 50 34.62 N NMEA Longitude = 127 31.41 W NMEA UTC (Time) = Mar 11 2013 14:51:16 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: IVI 12 Depth(m): 94 System UTC = Mar 11 2013 07:50:21 # nquan = 14 # nvalues = 6829 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 6829 # span 1 = 2.473, 88.377 # span 2 = 8.3102, 8.5010 # span 3 = 8.2028, 8.3969 # span 4 = 2.786227, 3.193900 # span 5 = 2.785775, 3.194103 # span 6 = 0.4127, 1.4286 # span 7 = 2.0233, 2.4629 # span 8 = 0, 1 # span 9 = -1.049, 1.457 # span 10 = 25.9394, 30.1355 # span 11 = 26.0143, 30.2289 # span 12 = 4.35157, 5.75773 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 11 2013 14:51:16 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:37, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0108.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:38:04, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-010 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:33, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-01 08.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:37, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0108.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:56, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0108.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 8.3993 1.151 26.9725 5.81 254.1 21 6.0 8.4120 1.125 27.0741 5.78 252.5 41 7.0 8.4196 1.066 27.3034 5.67 247.7 39 8.0 8.4197 0.950 27.5647 5.57 243.6 34 9.0 8.4204 0.850 28.4358 5.51 240.8 32 10.0 8.4174 0.815 28.6795 5.48 239.3 29 11.0 8.4181 0.793 28.7511 5.46 238.2 30 12.0 8.4289 0.668 28.9955 5.43 237.0 28 13.0 8.4273 0.608 29.2200 5.41 236.2 28 14.0 8.4338 0.582 29.3072 5.40 235.7 28 15.0 8.4482 0.573 29.3492 5.39 235.1 27 16.0 8.4611 0.538 29.4098 5.38 234.9 26 17.0 8.4661 0.523 29.4557 5.38 234.7 27 18.0 8.4683 0.541 29.4989 5.37 234.4 26 19.0 8.4731 0.518 29.5250 5.36 233.9 26 20.0 8.4799 0.513 29.5546 5.36 233.7 25 21.0 8.4840 0.518 29.5757 5.36 233.7 26 22.0 8.4847 0.525 29.5851 5.36 233.8 27 23.0 8.4864 0.516 29.6045 5.36 233.7 26 24.0 8.4804 0.515 29.6298 5.35 233.5 26 25.0 8.4723 0.516 29.6591 5.34 232.9 26 26.0 8.4653 0.526 29.6738 5.34 232.9 27 27.0 8.4650 0.505 29.6904 5.34 232.9 25 28.0 8.4658 0.501 29.7050 5.33 232.5 26 29.0 8.4725 0.507 29.7119 5.30 231.3 26 30.0 8.4845 0.505 29.7160 5.28 230.4 25 31.0 8.4969 0.492 29.7463 5.29 230.6 27 32.0 8.4945 0.490 29.7714 5.31 231.6 26 33.0 8.4687 0.493 29.7985 5.33 232.3 26 34.0 8.4369 0.504 29.8137 5.33 232.7 27 35.0 8.4255 0.514 29.8310 5.33 232.6 26 36.0 8.4205 0.510 29.8389 5.33 232.6 26 37.0 8.4170 0.526 29.8432 5.33 232.8 27 38.0 8.4161 0.526 29.8447 5.34 232.9 23 39.0 8.4004 0.518 29.8586 5.34 233.1 24 40.0 8.3953 0.515 29.8613 5.35 233.3 27 41.0 8.3897 0.512 29.8650 5.36 233.7 26 42.0 8.3795 0.521 29.8720 5.36 233.9 24 43.0 8.3631 0.530 29.8812 5.37 234.1 22 44.0 8.3527 0.533 29.8880 5.37 234.2 27 45.0 8.3489 0.560 29.8976 5.38 234.5 24 46.0 8.3409 0.552 29.9190 5.37 234.5 28 47.0 8.3322 0.551 29.9399 5.37 234.2 27 48.0 8.3294 0.559 29.9493 5.37 234.1 26 49.0 8.3316 0.574 29.9591 5.37 234.1 26 50.0 8.3303 0.576 29.9808 5.36 234.0 26 51.0 8.3253 0.582 30.0019 5.37 234.1 23 52.0 8.3238 0.567 30.0062 5.36 233.9 26 53.0 8.3238 0.568 30.0065 5.36 233.8 26 54.0 8.3231 0.585 30.0093 5.36 233.9 23 55.0 8.3229 0.591 30.0103 5.37 234.1 27 56.0 8.3231 0.594 30.0104 5.37 234.2 27 57.0 8.3232 0.571 30.0104 5.36 234.0 24 58.0 8.3234 0.575 30.0104 5.36 233.8 26 59.0 8.3237 0.564 30.0108 5.36 233.9 27 60.0 8.3239 0.566 30.0109 5.36 233.9 24 61.0 8.3241 0.571 30.0114 5.36 233.8 25 62.0 8.3243 0.560 30.0131 5.36 233.7 26 63.0 8.3250 0.597 30.0177 5.36 233.7 23 64.0 8.3247 0.588 30.0315 5.36 233.7 26 65.0 8.3228 0.581 30.0450 5.36 233.7 27 66.0 8.3220 0.586 30.0494 5.36 233.7 23 67.0 8.3217 0.592 30.0511 5.36 233.7 27 68.0 8.3214 0.604 30.0544 5.36 233.8 25 69.0 8.3215 0.600 30.0543 5.36 233.7 23 70.0 8.3213 0.580 30.0578 5.36 233.7 27 71.0 8.3207 0.591 30.0630 5.36 233.7 26 72.0 8.3201 0.607 30.0691 5.35 233.6 23 73.0 8.3203 0.589 30.0695 5.35 233.5 27 74.0 8.3200 0.588 30.0707 5.35 233.5 25 75.0 8.3167 0.594 30.0771 5.35 233.5 24 76.0 8.3122 0.594 30.0847 5.36 233.6 27 77.0 8.3107 0.610 30.0933 5.36 233.6 24 78.0 8.3112 0.591 30.0990 5.36 233.6 21 79.0 8.3152 0.592 30.1063 5.36 233.6 26 80.0 8.3158 0.590 30.1074 5.35 233.5 22 81.0 8.3159 0.601 30.1078 5.35 233.6 25 82.0 8.3160 0.571 30.1072 5.36 233.6 25 83.0 8.3173 0.599 30.1093 5.35 233.6 24 84.0 8.3178 0.603 30.1105 5.35 233.3 27 85.0 8.3177 0.609 30.1190 5.35 233.3 27 86.0 8.3182 0.581 30.1314 5.35 233.4 25 87.0 8.3182 0.610 30.1327 5.35 233.4 24 88.0 8.3182 0.569 30.1339 5.35 233.5 6