*2013/12/16 15:39:14.22 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/09 21:41:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 50 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : FF5CBE42 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 53 2 Temperature:Primary 'deg C (ITS90)' 7.3996 7.5642 3 Fluorescence:URU:Wetlabs mg/m^3 0.784 2.006 4 Salinity:T0:C0 PSS-78 31.5183 32.2077 5 Oxygen:Dissolved:SBE mL/L 6.077 6.684 6 Oxygen:Dissolved:SBE umol/kg 264.6407 291.2214 7 Number_of_bin_records n/a 10 43 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : T 5 EVENT NUMBER : 88 LATITUDE : 51 0.36000 N ! (deg min) LONGITUDE : 128 51.63000 W ! (deg min) WATER DEPTH : 62 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:33:39 5433 5433 CLEAN 5.1 2013/06/27 09:35:58 5433 5433 SHIFTDAT 3.4 2013/06/27 11:08:20 5433 5433 SHIFTDAT 3.4 2013/06/27 12:25:53 5433 5433 SHIFTDAT 3.4 2013/06/27 12:28:20 5433 5433 DELETE 6.3 2013/06/27 12:44:04 5433 1141 CTDEDIT 4.61 2013/06/28 17:09:33 1141 1113 CALIB 11.7 2013/06/29 15:08:50 1113 1113 FILTERS 4.3 2013/06/29 15:13:49 1113 1113 BINAVE 4.1.1 2013/06/29 15:14:34 1113 50 REMOVECH 8.1.1 2013/06/29 15:15:07 50 50 CHGUNITS 3.0 2013/06/29 15:28:23 50 50 REORDER 1.3 2013/06/29 15:57:26 ? ? HDREDIT2 2.6 2013/06/29 15:58:14 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:14 50 50 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 43.56 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/28 17:09:33 28 records were deleted in this editing session. 34 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/06/29 15:08:50 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:07 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:14 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0088.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 09 2013 13:41:19 NMEA Latitude = 51 00.36 N NMEA Longitude = 128 51.63 W NMEA UTC (Time) = Mar 09 2013 21:41:46 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: T 5 Depth(m): 62 System UTC = Mar 09 2013 13:41:19 # nquan = 14 # nvalues = 5433 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 5433 # span 1 = 1.549, 53.562 # span 2 = 7.3973, 7.5679 # span 3 = 7.2736, 7.4443 # span 4 = 3.244161, 3.325886 # span 5 = 3.244240, 3.325881 # span 6 = 0.6984, 2.4762 # span 7 = 2.4738, 2.7107 # span 8 = 0, 1 # span 9 = -1.641, 2.514 # span 10 = 31.5166, 32.2177 # span 11 = 31.6301, 32.3330 # span 12 = 5.49499, 6.39440 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 09 2013 21:41:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:33, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0088.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:38:02, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-008 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:31, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-00 88.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:35, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0088.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:54, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0088.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 7.4013 1.919 31.5185 6.68 291.1 17 5.0 7.4013 1.893 31.5185 6.68 291.2 34 6.0 7.4009 1.846 31.5184 6.68 291.2 28 7.0 7.4018 1.906 31.5183 6.68 291.2 39 8.0 7.4023 1.904 31.5184 6.68 291.0 27 9.0 7.3996 1.878 31.5195 6.68 291.0 29 10.0 7.3997 1.890 31.5199 6.68 291.2 40 11.0 7.3999 1.929 31.5206 6.68 291.0 38 12.0 7.4001 1.912 31.5206 6.68 291.2 25 13.0 7.4001 1.916 31.5215 6.68 291.0 16 14.0 7.3999 1.941 31.5204 6.68 291.1 13 15.0 7.4000 1.931 31.5204 6.68 291.2 12 16.0 7.4002 1.963 31.5206 6.68 291.2 13 17.0 7.4005 1.955 31.5209 6.68 291.2 17 18.0 7.4005 1.985 31.5203 6.68 291.1 26 19.0 7.4010 2.006 31.5207 6.67 290.7 43 20.0 7.4018 1.909 31.5229 6.68 291.0 36 21.0 7.4024 1.895 31.5251 6.60 287.6 25 22.0 7.4032 1.887 31.5269 6.50 283.0 23 23.0 7.4151 1.651 31.5607 6.46 281.5 17 24.0 7.4418 1.483 31.6337 6.44 280.7 15 25.0 7.4587 1.401 31.6782 6.43 280.3 15 26.0 7.4627 1.414 31.6876 6.43 280.3 16 27.0 7.4629 1.378 31.6880 6.44 280.5 18 28.0 7.4634 1.369 31.6884 6.44 280.6 19 29.0 7.4629 1.400 31.6864 6.44 280.5 21 30.0 7.4637 1.412 31.6891 6.43 280.3 23 31.0 7.4640 1.407 31.6909 6.43 280.2 26 32.0 7.4687 1.382 31.7083 6.42 279.9 32 33.0 7.4737 1.339 31.7297 6.40 279.0 33 34.0 7.4775 1.336 31.7498 6.39 278.5 18 35.0 7.4933 1.282 31.8305 6.35 276.6 28 36.0 7.4943 1.230 31.8357 6.32 275.3 22 37.0 7.5063 1.139 31.9082 6.29 274.2 16 38.0 7.5197 1.071 31.9837 6.24 271.9 14 39.0 7.5289 1.077 32.0351 6.19 269.6 14 40.0 7.5219 1.118 31.9913 6.15 267.9 17 41.0 7.5288 1.012 32.0317 6.12 266.6 23 42.0 7.5584 0.845 32.1896 6.10 265.7 19 43.0 7.5619 0.839 32.2032 6.10 265.6 19 44.0 7.5628 0.837 32.2062 6.10 265.7 18 45.0 7.5629 0.840 32.2069 6.10 265.8 22 46.0 7.5634 0.819 32.2069 6.10 265.5 25 47.0 7.5620 0.809 32.2003 6.09 265.1 10 48.0 7.5630 0.805 32.2065 6.09 265.1 10 49.0 7.5633 0.784 32.2070 6.09 265.2 10 50.0 7.5637 0.828 32.2076 6.09 265.2 10 51.0 7.5638 0.825 32.2075 6.09 265.3 14 52.0 7.5642 0.826 32.2076 6.08 264.9 24 53.0 7.5642 0.804 32.2077 6.08 264.6 27