*2013/12/16 15:39:14.19 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/09 20:02:55.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 56 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9A23928F NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 58 2 Temperature:Primary 'deg C (ITS90)' 7.5168 7.5821 3 Fluorescence:URU:Wetlabs mg/m^3 0.837 2.186 4 Salinity:T0:C0 PSS-78 31.5778 32.1554 5 Oxygen:Dissolved:SBE mL/L 6.245 6.86 6 Oxygen:Dissolved:SBE umol/kg 271.9683 298.8806 7 Number_of_bin_records n/a 1 48 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : T 4 EVENT NUMBER : 85 LATITUDE : 51 5.07000 N ! (deg min) LONGITUDE : 128 42.74000 W ! (deg min) WATER DEPTH : 65 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:33:37 5305 5305 CLEAN 5.1 2013/06/27 09:35:56 5305 5305 SHIFTDAT 3.4 2013/06/27 11:08:19 5305 5305 SHIFTDAT 3.4 2013/06/27 12:25:51 5305 5305 SHIFTDAT 3.4 2013/06/27 12:28:19 5305 5305 DELETE 6.3 2013/06/27 12:44:03 5305 1343 CTDEDIT 4.61 2013/06/28 17:04:43 1343 1204 CALIB 11.7 2013/06/29 15:08:49 1204 1204 FILTERS 4.3 2013/06/29 15:13:49 1204 1204 BINAVE 4.1.1 2013/06/29 15:14:34 1204 56 REMOVECH 8.1.1 2013/06/29 15:15:07 56 56 CHGUNITS 3.0 2013/06/29 15:28:23 56 56 REORDER 1.3 2013/06/29 15:57:26 ? ? HDREDIT2 2.6 2013/06/29 15:58:14 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:14 56 56 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 48.21 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/28 17:04:43 139 records were deleted in this editing session. 8 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/06/29 15:08:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:07 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:14 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0085.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 09 2013 12:02:06 NMEA Latitude = 51 05.07 N NMEA Longitude = 128 42.74 W NMEA UTC (Time) = Mar 09 2013 20:02:55 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: T 4 Depth(m): 65 System UTC = Mar 09 2013 12:02:06 # nquan = 14 # nvalues = 5305 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 5305 # span 1 = 1.975, 58.207 # span 2 = 7.5159, 7.5830 # span 3 = 7.3901, 7.4579 # span 4 = 3.263797, 3.323260 # span 5 = 3.263973, 3.322837 # span 6 = 0.7302, 2.4603 # span 7 = 2.5141, 2.7754 # span 8 = 0, 1 # span 9 = -2.254, 1.977 # span 10 = 31.5753, 32.1736 # span 11 = 31.6897, 32.2856 # span 12 = 5.71706, 6.55947 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 09 2013 20:02:55 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:32, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0085.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:38:02, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-008 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:31, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-00 85.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:34, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0085.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:53, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0085.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 7.5693 1.683 31.5784 6.85 298.3 1 4.0 7.5700 1.765 31.5788 6.85 298.3 23 5.0 7.5726 1.900 31.5794 6.84 298.2 10 6.0 7.5710 1.957 31.5790 6.84 298.2 20 7.0 7.5715 2.074 31.5793 6.85 298.3 19 8.0 7.5737 2.154 31.5800 6.85 298.6 18 9.0 7.5753 2.137 31.5801 6.85 298.4 34 10.0 7.5757 2.165 31.5803 6.84 298.2 31 11.0 7.5740 2.175 31.5801 6.84 298.1 18 12.0 7.5729 2.168 31.5797 6.85 298.3 24 13.0 7.5731 2.163 31.5795 6.85 298.3 33 14.0 7.5737 2.181 31.5798 6.84 298.2 26 15.0 7.5739 2.158 31.5802 6.85 298.4 19 16.0 7.5705 2.170 31.5786 6.86 298.7 18 17.0 7.5693 2.186 31.5781 6.86 298.8 18 18.0 7.5690 2.176 31.5778 6.86 298.7 21 19.0 7.5758 2.150 31.5821 6.85 298.5 23 20.0 7.5815 2.152 31.5873 6.85 298.5 40 21.0 7.5789 2.120 31.5880 6.85 298.6 27 22.0 7.5754 2.093 31.5888 6.85 298.6 20 23.0 7.5736 2.066 31.5893 6.86 298.8 19 24.0 7.5744 2.064 31.5890 6.86 298.8 22 25.0 7.5747 2.091 31.5884 6.85 298.3 36 26.0 7.5745 2.086 31.5885 6.85 298.3 30 27.0 7.5711 2.086 31.5900 6.86 298.8 20 28.0 7.5682 2.057 31.5912 6.86 298.8 20 29.0 7.5691 2.071 31.5910 6.86 298.7 25 30.0 7.5720 2.056 31.5895 6.86 298.8 29 31.0 7.5719 2.061 31.5896 6.86 298.9 32 32.0 7.5709 2.068 31.5901 6.86 298.7 42 33.0 7.5699 2.089 31.5908 6.85 298.6 29 34.0 7.5693 2.059 31.5912 6.85 298.5 19 35.0 7.5676 2.041 31.5918 6.85 298.5 16 36.0 7.5612 2.021 31.5942 6.85 298.3 14 37.0 7.5577 2.009 31.5950 6.85 298.3 14 38.0 7.5498 2.003 31.5970 6.85 298.5 15 39.0 7.5486 2.023 31.5971 6.85 298.5 17 40.0 7.5449 2.018 31.5977 6.86 298.7 26 41.0 7.5409 2.066 31.5986 6.86 298.7 12 42.0 7.5305 1.973 31.6019 6.82 297.2 24 43.0 7.5305 1.977 31.6027 6.78 295.2 23 44.0 7.5254 1.936 31.6083 6.73 293.3 17 45.0 7.5213 1.826 31.6154 6.71 292.4 15 46.0 7.5185 1.742 31.6299 6.69 291.4 13 47.0 7.5194 1.680 31.6724 6.65 289.8 13 48.0 7.5207 1.650 31.7036 6.60 287.5 13 49.0 7.5174 1.631 31.7302 6.54 285.1 12 50.0 7.5168 1.579 31.7419 6.50 283.4 13 51.0 7.5294 1.442 31.7875 6.48 282.4 14 52.0 7.5269 1.260 31.8664 6.48 282.3 20 53.0 7.5409 1.134 31.9486 6.40 278.6 23 54.0 7.5483 0.992 31.9711 6.29 274.2 18 55.0 7.5656 0.906 32.0404 6.27 273.2 16 56.0 7.5758 0.873 32.0833 6.26 272.7 19 57.0 7.5808 0.839 32.1185 6.25 272.3 18 58.0 7.5821 0.837 32.1554 6.25 272.0 48