*2013/12/16 15:39:13.45 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/05 15:07:29.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 111 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9C5A8613 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 7 117 2 Temperature:Primary 'deg C (ITS90)' 7.1844 8.527 3 Fluorescence:URU:Wetlabs mg/m^3 0.401 2.415 4 Salinity:T0:C0 PSS-78 27.9002 30.1201 5 Oxygen:Dissolved:SBE mL/L 3.966 6.866 6 Oxygen:Dissolved:SBE umol/kg 173.0369 299.9435 7 Number_of_bin_records n/a 17 51 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : GS 11 EVENT NUMBER : 25 LATITUDE : 49 13.77000 N ! (deg min) LONGITUDE : 123 53.61000 W ! (deg min) WATER DEPTH : 138 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:32:27 7578 7578 CLEAN 5.1 2013/06/27 09:34:43 7578 7578 SHIFTDAT 3.4 2013/06/27 11:07:07 7578 7578 SHIFTDAT 3.4 2013/06/27 12:24:41 7578 7578 SHIFTDAT 3.4 2013/06/27 12:27:01 7578 7578 DELETE 6.3 2013/06/27 12:43:11 7578 3206 CTDEDIT 4.61 2013/06/28 09:42:17 3206 3084 CALIB 11.7 2013/06/29 15:08:24 3084 3084 FILTERS 4.3 2013/06/29 15:13:25 3084 3084 BINAVE 4.1.1 2013/06/29 15:14:23 3084 111 REMOVECH 8.1.1 2013/06/29 15:15:06 111 111 CHGUNITS 3.0 2013/06/29 15:28:22 111 111 REORDER 1.3 2013/06/29 15:57:25 ? ? HDREDIT2 2.6 2013/06/29 15:58:12 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:13 111 111 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 107.82 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/28 09:42:17 122 records were deleted in this editing session. 179 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/06/29 15:08:24 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:06 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:12 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0025.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 05 2013 07:06:42 NMEA Latitude = 49 13.77 N NMEA Longitude = 123 53.61 W NMEA UTC (Time) = Mar 05 2013 15:07:29 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: GS 11 Depth(m): 138 System UTC = Mar 05 2013 07:06:42 # nquan = 14 # nvalues = 7578 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 7578 # span 1 = 3.350, 117.818 # span 2 = 7.1796, 8.5277 # span 3 = 7.0931, 8.4385 # span 4 = 2.887110, 3.210520 # span 5 = 2.886820, 3.210650 # span 6 = 0.3175, 4.2540 # span 7 = 1.8216, 2.7046 # span 8 = 0, 1 # span 9 = -1.161, 1.099 # span 10 = 27.8609, 30.1210 # span 11 = 27.9314, 30.1986 # span 12 = 3.77476, 6.56130 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 05 2013 15:07:29 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:07, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0025.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:37:48, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-002 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:18, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-00 25.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:20, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0025.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:35, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0025.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 7.0 7.1956 2.085 27.9035 6.86 299.5 41 8.0 7.1963 2.008 27.9051 6.86 299.6 51 9.0 7.1944 2.063 27.9002 6.85 299.3 35 10.0 7.1943 2.038 27.9786 6.86 299.7 32 11.0 7.2014 2.025 28.0423 6.87 299.9 30 12.0 7.1844 1.994 28.0620 6.83 298.3 31 13.0 7.1883 1.999 28.0712 6.72 293.7 29 14.0 7.2626 2.301 28.1477 6.64 289.9 27 15.0 7.3543 2.415 28.2976 6.57 287.0 26 16.0 7.3996 2.289 28.4071 6.52 284.7 27 17.0 7.4368 2.333 28.4678 6.44 281.1 26 18.0 7.4629 2.230 28.5082 6.38 278.4 27 19.0 7.5133 2.131 28.6126 6.30 275.1 28 20.0 7.5419 2.003 28.7094 6.18 269.8 26 21.0 7.5762 1.902 28.8251 6.10 266.3 27 22.0 7.6479 1.783 28.9545 6.04 263.6 26 23.0 7.6764 1.661 29.0014 5.97 260.5 26 24.0 7.6877 1.790 29.0242 5.92 258.5 25 25.0 7.7200 1.616 29.0790 5.90 257.4 27 26.0 7.7512 1.529 29.1229 5.89 257.0 25 27.0 7.7604 1.485 29.1357 5.87 256.2 27 28.0 7.7671 1.503 29.1465 5.81 253.6 27 29.0 7.7740 1.466 29.1527 5.76 251.6 26 30.0 7.8033 1.414 29.1772 5.74 250.7 26 31.0 7.8149 1.383 29.1942 5.73 250.2 26 32.0 7.8145 1.356 29.1959 5.71 249.5 27 33.0 7.8151 1.330 29.1989 5.71 249.0 25 34.0 7.8179 1.348 29.2035 5.70 248.8 26 35.0 7.8178 1.371 29.2061 5.68 247.8 26 36.0 7.8153 1.331 29.2055 5.65 246.5 25 37.0 7.8155 1.295 29.2123 5.56 242.6 20 38.0 7.8204 1.278 29.2246 5.41 236.1 26 39.0 7.8359 1.246 29.2437 5.34 233.0 25 40.0 7.9157 1.138 29.3366 5.29 231.1 25 41.0 7.9395 1.069 29.3604 5.25 229.3 26 42.0 7.9392 1.045 29.3598 5.23 228.1 26 43.0 7.9658 1.022 29.3882 5.15 224.7 25 44.0 7.9710 1.024 29.3926 5.03 219.5 24 45.0 7.9918 1.006 29.4148 4.90 213.9 25 46.0 8.0548 0.915 29.4796 4.78 208.6 25 47.0 8.1072 0.853 29.5340 4.69 204.8 27 48.0 8.1595 0.785 29.5847 4.63 202.1 27 49.0 8.1971 0.742 29.6208 4.58 199.7 25 50.0 8.2075 0.713 29.6298 4.54 198.3 26 51.0 8.2338 0.709 29.6555 4.51 197.0 27 52.0 8.2487 0.653 29.6692 4.49 196.1 25 53.0 8.2579 0.664 29.6780 4.48 195.7 27 54.0 8.2715 0.642 29.6900 4.46 194.6 26 55.0 8.2692 0.621 29.6875 4.41 192.6 25 56.0 8.2804 0.633 29.6981 4.34 189.3 26 57.0 8.2996 0.598 29.7154 4.27 186.5 24 58.0 8.3324 0.601 29.7475 4.24 185.0 26 59.0 8.3663 0.538 29.7793 4.21 183.6 26 60.0 8.3771 0.524 29.7887 4.13 180.4 24 61.0 8.3772 0.534 29.7893 4.05 176.9 28 62.0 8.4066 0.495 29.8171 4.04 176.1 27 63.0 8.4472 0.475 29.8574 4.04 176.4 23 64.0 8.4656 0.446 29.8771 4.03 175.7 27 65.0 8.4773 0.444 29.8898 4.00 174.4 26 66.0 8.4787 0.471 29.8885 3.98 173.8 17 67.0 8.4919 0.432 29.9118 3.97 173.3 24 68.0 8.4947 0.444 29.9138 3.97 173.2 26 69.0 8.4953 0.443 29.9142 3.97 173.0 24 70.0 8.4966 0.445 29.9149 3.98 173.5 26 71.0 8.4984 0.442 29.9159 4.00 174.5 26 72.0 8.4984 0.428 29.9173 4.03 175.8 24 73.0 8.4946 0.430 29.9190 4.06 177.2 27 74.0 8.4913 0.435 29.9197 4.07 177.6 28 75.0 8.4812 0.446 29.9225 4.09 178.4 27 76.0 8.4822 0.451 29.9221 4.09 178.7 27 77.0 8.4786 0.445 29.9224 4.10 179.1 27 78.0 8.4770 0.435 29.9220 4.12 179.6 27 79.0 8.4755 0.454 29.9229 4.13 180.1 27 80.0 8.4735 0.484 29.9243 4.14 180.7 28 81.0 8.4734 0.469 29.9261 4.13 180.4 27 82.0 8.4695 0.460 29.9308 4.15 181.0 28 83.0 8.4745 0.457 29.9314 4.17 181.9 28 84.0 8.4710 0.475 29.9354 4.17 181.8 26 85.0 8.4652 0.469 29.9375 4.13 180.1 28 86.0 8.4686 0.456 29.9567 4.08 178.2 28 87.0 8.4937 0.433 29.9777 4.08 177.8 26 88.0 8.5200 0.433 30.0135 4.08 177.8 27 89.0 8.5258 0.411 30.0412 4.08 177.8 28 90.0 8.5260 0.405 30.0463 4.08 177.9 26 91.0 8.5264 0.416 30.0449 4.07 177.7 27 92.0 8.5259 0.417 30.0509 4.07 177.6 27 93.0 8.5267 0.423 30.0389 4.07 177.6 27 94.0 8.5265 0.408 30.0406 4.07 177.7 28 95.0 8.5263 0.423 30.0475 4.07 177.7 27 96.0 8.5270 0.417 30.0456 4.08 178.0 25 97.0 8.5269 0.403 30.0469 4.09 178.4 29 98.0 8.5245 0.424 30.0589 4.10 178.9 27 99.0 8.5244 0.408 30.0619 4.11 179.3 25 100.0 8.5213 0.408 30.0721 4.12 179.7 29 101.0 8.5189 0.418 30.0801 4.13 180.3 27 102.0 8.5177 0.412 30.0833 4.14 180.6 26 103.0 8.5117 0.405 30.0947 4.14 180.8 28 104.0 8.5062 0.413 30.1095 4.15 181.2 29 105.0 8.5066 0.410 30.1075 4.16 181.3 26 106.0 8.5017 0.406 30.1010 4.15 181.0 28 107.0 8.5016 0.414 30.1031 4.14 180.6 28 108.0 8.5060 0.435 30.1084 4.13 180.1 27 109.0 8.5122 0.421 30.1143 4.12 179.7 31 110.0 8.5160 0.407 30.1166 4.12 179.6 35 111.0 8.5199 0.425 30.1191 4.12 179.6 36 112.0 8.5209 0.411 30.1198 4.12 179.5 34 113.0 8.5213 0.406 30.1198 4.11 179.4 41 114.0 8.5210 0.411 30.1200 4.11 179.4 38 115.0 8.5212 0.410 30.1198 4.11 179.5 39 116.0 8.5229 0.401 30.1200 4.11 179.5 41 117.0 8.5234 0.411 30.1201 4.11 179.4 31