*2013/12/16 15:39:13.20 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/04 00:33:19.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 88 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : ACE042D3 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5 92 2 Temperature:Primary 'deg C (ITS90)' 7.6249 7.7096 3 Fluorescence:URU:Wetlabs mg/m^3 0.701 1.565 4 Salinity:T0:C0 PSS-78 29.3433 30.7174 5 Oxygen:Dissolved:SBE mL/L 5.131 5.797 6 Oxygen:Dissolved:SBE umol/kg 223.7017 253.0069 7 Number_of_bin_records n/a 9 50 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : GS 04 EVENT NUMBER : 7 LATITUDE : 48 48.93000 N ! (deg min) LONGITUDE : 123 20.52000 W ! (deg min) WATER DEPTH : 103 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:32:07 6436 6436 CLEAN 5.1 2013/06/27 09:34:24 6436 6436 SHIFTDAT 3.4 2013/06/27 11:06:47 6436 6436 SHIFTDAT 3.4 2013/06/27 12:24:21 6436 6436 SHIFTDAT 3.4 2013/06/27 12:26:43 6436 6436 DELETE 6.3 2013/06/27 12:42:56 6436 2454 CTDEDIT 4.61 2013/06/28 08:55:03 2454 2377 CALIB 11.7 2013/06/29 15:08:15 2377 2377 FILTERS 4.3 2013/06/29 15:13:16 2377 2377 BINAVE 4.1.1 2013/06/29 15:14:19 2377 88 REMOVECH 8.1.1 2013/06/29 15:15:05 88 88 CHGUNITS 3.0 2013/06/29 15:28:21 88 88 REORDER 1.3 2013/06/29 15:57:24 ? ? HDREDIT2 2.6 2013/06/29 15:58:12 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:13 88 88 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 82.54 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/28 08:55:03 77 records were deleted in this editing session. 97 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/06/29 15:08:15 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:05 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:12 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0007.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 03 2013 16:33:08 NMEA Latitude = 48 48.93 N NMEA Longitude = 123 20.52 W NMEA UTC (Time) = Mar 04 2013 00:33:19 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: GS 03 Depth(m): 103 System UTC = Mar 03 2013 16:33:08 # nquan = 14 # nvalues = 6436 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 6436 # span 1 = 3.808, 92.543 # span 2 = 7.6245, 7.7177 # span 3 = 7.5755, 7.6754 # span 4 = 3.064539, 3.192195 # span 5 = 3.064833, 3.192250 # span 6 = 0.6349, 3.2222 # span 7 = 2.1746, 2.4042 # span 8 = 0, 1 # span 9 = -1.368, 1.201 # span 10 = 29.3407, 30.7183 # span 11 = 29.3802, 30.7619 # span 12 = 4.88592, 5.54031 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 04 2013 00:33:19 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:01, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0007.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:37:45, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-000 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:14, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-00 07.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:16, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0007.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:31, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0007.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove a few records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 7.7006 1.427 29.3433 5.80 253.0 26 6.0 7.7091 1.437 29.4092 5.78 252.3 9 7.0 7.7096 1.565 29.4296 5.77 251.9 24 8.0 7.7051 1.443 29.3761 5.76 251.3 29 9.0 7.7072 1.520 29.4176 5.75 250.8 27 10.0 7.7075 1.436 29.4447 5.74 250.6 25 11.0 7.7065 1.477 29.4720 5.69 248.2 25 12.0 7.7081 1.543 29.4369 5.59 244.0 26 13.0 7.7072 1.407 29.4585 5.54 241.8 25 14.0 7.6924 1.161 29.8721 5.51 240.4 25 15.0 7.6881 1.150 29.9659 5.49 239.7 26 16.0 7.6854 1.172 30.0021 5.48 239.1 24 17.0 7.6833 1.115 30.0323 5.47 238.8 25 18.0 7.6808 1.249 30.0725 5.48 238.9 25 19.0 7.6805 1.104 30.0791 5.48 238.9 25 20.0 7.6809 1.192 30.0752 5.47 238.6 24 21.0 7.6813 1.103 30.0723 5.46 238.4 25 22.0 7.6802 1.145 30.0863 5.46 238.1 24 23.0 7.6804 1.118 30.0855 5.46 238.1 20 24.0 7.6777 1.119 30.1184 5.45 237.9 25 25.0 7.6781 1.089 30.1241 5.45 237.7 26 26.0 7.6808 1.112 30.1291 5.44 237.4 25 27.0 7.6831 1.118 30.1334 5.44 237.3 26 28.0 7.6830 1.117 30.1328 5.44 237.2 25 29.0 7.6834 1.059 30.1314 5.44 237.5 26 30.0 7.6843 1.215 30.1322 5.45 237.7 25 31.0 7.6849 1.143 30.1322 5.45 237.8 26 32.0 7.6885 1.211 30.1356 5.45 237.8 25 33.0 7.6910 1.301 30.1391 5.45 237.8 25 34.0 7.6894 1.177 30.1358 5.46 238.0 26 35.0 7.6886 1.159 30.1349 5.45 237.9 26 36.0 7.6910 1.228 30.1386 5.45 237.8 24 37.0 7.6959 1.155 30.1454 5.45 237.7 26 38.0 7.7039 1.192 30.1607 5.44 237.4 26 39.0 7.7047 1.157 30.1627 5.44 237.4 25 40.0 7.7059 1.149 30.1694 5.44 237.1 26 41.0 7.7044 1.212 30.1723 5.43 236.7 26 42.0 7.7044 1.186 30.1821 5.42 236.3 26 43.0 7.7044 1.144 30.1961 5.40 235.7 25 44.0 7.7008 1.159 30.2090 5.39 235.1 25 45.0 7.6951 1.171 30.2219 5.38 234.7 26 46.0 7.6888 1.170 30.2324 5.37 234.2 27 47.0 7.6857 1.138 30.2388 5.35 233.2 26 48.0 7.6840 1.148 30.2460 5.33 232.4 24 49.0 7.6804 1.071 30.2884 5.32 232.0 25 50.0 7.6780 1.051 30.3117 5.31 231.7 27 51.0 7.6773 1.003 30.3185 5.31 231.4 25 52.0 7.6767 1.044 30.3234 5.30 231.1 25 53.0 7.6758 1.036 30.3298 5.29 230.9 27 54.0 7.6741 1.112 30.3430 5.29 230.6 23 55.0 7.6714 1.026 30.3628 5.28 230.2 26 56.0 7.6699 1.006 30.3758 5.27 229.7 23 57.0 7.6668 1.020 30.3957 5.26 229.2 28 58.0 7.6650 0.967 30.4104 5.25 228.8 24 59.0 7.6611 0.984 30.4383 5.23 228.2 28 60.0 7.6592 0.917 30.4528 5.22 227.5 28 61.0 7.6554 0.920 30.4855 5.20 226.8 28 62.0 7.6526 0.890 30.5093 5.19 226.1 26 63.0 7.6479 0.866 30.5455 5.18 225.8 28 64.0 7.6437 0.867 30.5766 5.18 225.8 28 65.0 7.6397 0.856 30.6026 5.17 225.6 25 66.0 7.6390 0.820 30.6076 5.17 225.5 29 67.0 7.6398 0.820 30.6038 5.18 225.7 27 68.0 7.6381 0.822 30.6124 5.17 225.5 23 69.0 7.6364 0.801 30.6229 5.17 225.4 26 70.0 7.6366 0.795 30.6225 5.17 225.4 30 71.0 7.6364 0.794 30.6241 5.17 225.3 29 72.0 7.6356 0.818 30.6302 5.16 225.1 27 73.0 7.6346 0.781 30.6375 5.16 225.1 29 74.0 7.6335 0.814 30.6463 5.16 224.8 31 75.0 7.6343 0.801 30.6414 5.15 224.7 29 76.0 7.6336 0.804 30.6467 5.15 224.6 27 77.0 7.6317 0.774 30.6609 5.15 224.5 30 78.0 7.6305 0.752 30.6701 5.15 224.5 32 79.0 7.6290 0.759 30.6816 5.14 224.3 31 80.0 7.6295 0.742 30.6780 5.14 224.2 29 81.0 7.6279 0.730 30.6911 5.14 224.3 28 82.0 7.6268 0.756 30.6991 5.13 223.9 32 83.0 7.6270 0.733 30.6995 5.13 223.7 31 84.0 7.6257 0.727 30.7092 5.13 223.9 33 85.0 7.6250 0.729 30.7153 5.14 224.0 28 86.0 7.6250 0.701 30.7165 5.13 223.9 27 87.0 7.6249 0.720 30.7168 5.13 223.7 32 88.0 7.6249 0.703 30.7174 5.13 223.8 31 89.0 7.6251 0.707 30.7167 5.13 223.8 43 90.0 7.6255 0.722 30.7157 5.13 223.7 50 91.0 7.6257 0.715 30.7149 5.14 223.9 41 92.0 7.6255 0.710 30.7169 5.13 223.8 14