*2013/12/16 15:39:13.19 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/03/03 22:03:21.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 59 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : E88D8EAD NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4 62 2 Temperature:Primary 'deg C (ITS90)' 7.6846 8.1004 3 Fluorescence:URU:Wetlabs mg/m^3 0.879 3.97 4 Salinity:T0:C0 PSS-78 27.8539 30.2137 5 Oxygen:Dissolved:SBE mL/L 5.181 6.596 6 Oxygen:Dissolved:SBE umol/kg 225.9792 288.2229 7 Number_of_bin_records n/a 21 35 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2013-10\Pro $END *ADMINISTRATION MISSION : 2013-10 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Q.C. Strait / WCVI Inlets STATION : GS 02 EVENT NUMBER : 4 LATITUDE : 48 42.19000 N ! (deg min) LONGITUDE : 123 29.45000 W ! (deg min) WATER DEPTH : 70 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2424 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.2 2013/06/27 09:32:06 4894 4894 CLEAN 5.1 2013/06/27 09:34:22 4894 4894 SHIFTDAT 3.4 2013/06/27 11:06:46 4894 4894 SHIFTDAT 3.4 2013/06/27 12:24:20 4894 4894 SHIFTDAT 3.4 2013/06/27 12:26:42 4894 4894 DELETE 6.3 2013/06/27 12:42:55 4894 1530 CTDEDIT 4.61 2013/06/27 17:36:46 1530 1521 CALIB 11.7 2013/06/29 15:08:14 1521 1521 FILTERS 4.3 2013/06/29 15:13:15 1521 1521 BINAVE 4.1.1 2013/06/29 15:14:18 1521 59 REMOVECH 8.1.1 2013/06/29 15:15:05 59 59 CHGUNITS 3.0 2013/06/29 15:28:21 59 59 REORDER 1.3 2013/06/29 15:57:24 ? ? HDREDIT2 2.6 2013/06/29 15:58:12 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:39:13 59 59 $END $REMARKS -CLEAN functions: 2013/06/27 09:34:21 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.10 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 52.70 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/06/27 17:36:46 9 records were deleted in this editing session. 18 changes in channel Salinity:T0:C0 -CALIB parameters: 2013/06/29 15:08:14 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.1380000E-01 0.1046500E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint:2 Fluorescence:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/06/29 15:15:05 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/06/29 15:58:12 Applied edit header: P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2013-10\2013-10-0004.hex Software Version Seasave V 7.22.4 Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Mar 03 2013 14:05:46 NMEA Latitude = 48 42.19 N NMEA Longitude = 123 29.45 W NMEA UTC (Time) = Mar 03 2013 22:03:21 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2013-10 Station: GS 02 Depth(m): 70 System UTC = Mar 03 2013 14:05:46 # nquan = 14 # nvalues = 4894 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = pumps: Pump Status # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 4894 # span 1 = 3.430, 62.702 # span 2 = 7.6827, 8.1068 # span 3 = 7.6363, 8.0593 # span 4 = 2.941628, 3.149922 # span 5 = 2.944753, 3.149888 # span 6 = 0.7302, 7.2381 # span 7 = 2.2003, 3.0428 # span 8 = 0, 1 # span 9 = -1.141, 1.245 # span 10 = 27.7238, 30.2244 # span 11 = 27.7904, 30.2643 # span 12 = 4.93150, 7.45067 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Mar 03 2013 22:03:21 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0506 # 15-Apr-11 # -4.957807e+004 # -1.280011e+000 # 1.485710e-002 # 4.021200e-002 # 0.000000e+000 # 3.037224e+001 # -6.696188e-004 # 3.897170e-006 # 3.287590e-009 # 0.99992459 # -0.10000 # 0.000000e+000 # 1.280810e-002 # -9.210198e+000 # # # # # # 2663 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.37922733e-003 # 6.52156445e-004 # 2.50583016e-005 # 2.45150025e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2424 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00422903e+001 # 1.46672240e+000 # 9.13089396e-004 # 5.03120339e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 29-Mar-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.2780e-001 # -0.5109 # -1.5691e-003 # 7.1741e-005 # -1.3719e-006 # 2.5826e+000 # 1.92630e-004 # -4.64803e-002 # 3.6000e-002 # 1.1300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0000 # # # # # # # # # # # # # # # # datcnv_date = Jun 26 2013 14:04:00, 7.22.5 [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2013-10\RAW\CTD\2013-10-0004.hex P:\Crui se_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jun 26 2013 14:37:44, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2013-10\Processing\convert\2013-10-000 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2013 15:52:14, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2013-10\Processing\wildedit\2013-10-00 04.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Jun 26 2013 16:14:16, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2013-10\Processing\align\2013-10-0004.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2013 16:16:30, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2013-10\Processing\celltm\2013-10-0004.c nv P:\Cruise_Data_Processing\2013-10\Processing\doc\2013-10-ctd.XMLCON # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove a few records near the surface and to clean salinity lightly. Data Processing Notes: ---------------------- Transmissivity and Fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the result of cruise 2012-06 was used to derive DO concentration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Some casts were not processed due to problems with both temperature sensors. For details on the processing see processing report: 2013-10-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.138E-01 1.0465) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 8.1004 3.970 27.8539 6.60 288.2 35 5.0 8.0477 3.125 28.0663 5.56 242.9 31 6.0 7.7908 1.204 29.3600 5.33 232.6 26 7.0 7.7534 1.384 29.6247 5.38 234.9 21 8.0 7.7376 1.441 29.6769 5.39 235.1 25 9.0 7.7367 1.455 29.6781 5.38 234.7 25 10.0 7.7361 1.568 29.6794 5.38 234.6 21 11.0 7.7345 1.308 29.6826 5.37 234.2 24 12.0 7.7337 1.304 29.6842 5.36 233.7 24 13.0 7.7301 1.259 29.6885 5.35 233.4 25 14.0 7.7273 1.304 29.6958 5.34 233.0 25 15.0 7.7219 1.402 29.7235 5.33 232.7 25 16.0 7.7206 1.262 29.7344 5.33 232.3 25 17.0 7.7204 1.251 29.7415 5.31 231.9 22 18.0 7.7203 1.202 29.7466 5.31 231.8 26 19.0 7.7220 1.172 29.7482 5.31 231.6 26 20.0 7.7234 1.235 29.7510 5.30 231.4 24 21.0 7.7230 1.267 29.7482 5.29 230.9 25 22.0 7.7241 1.174 29.7509 5.28 230.5 25 23.0 7.7255 1.183 29.7611 5.27 229.9 25 24.0 7.7243 1.162 29.7760 5.27 229.9 27 25.0 7.7204 1.088 29.8047 5.27 230.0 25 26.0 7.7149 1.090 29.8306 5.27 229.9 25 27.0 7.7097 1.072 29.8523 5.27 229.9 26 28.0 7.7038 1.060 29.8863 5.27 230.0 24 29.0 7.7039 1.003 29.8979 5.27 229.9 25 30.0 7.7007 0.978 29.9144 5.27 229.8 25 31.0 7.6985 1.055 29.9249 5.27 229.9 24 32.0 7.6981 1.002 29.9268 5.27 229.8 24 33.0 7.6982 1.054 29.9278 5.26 229.7 26 34.0 7.6983 1.004 29.9281 5.27 230.0 25 35.0 7.6980 0.987 29.9302 5.29 230.6 22 36.0 7.6970 1.023 29.9365 5.29 230.8 26 37.0 7.6948 1.012 29.9765 5.29 231.0 24 38.0 7.6929 0.975 30.0044 5.29 230.8 25 39.0 7.6909 1.048 30.0278 5.27 229.8 26 40.0 7.6887 1.029 30.0483 5.25 229.1 26 41.0 7.6900 1.017 30.0777 5.25 229.0 26 42.0 7.6915 0.990 30.0856 5.24 228.7 25 43.0 7.6915 1.006 30.0887 5.24 228.5 26 44.0 7.6918 0.945 30.0895 5.24 228.4 21 45.0 7.6926 0.989 30.0957 5.25 228.8 23 46.0 7.6922 0.975 30.0971 5.25 229.1 26 47.0 7.6919 1.039 30.1022 5.26 229.3 26 48.0 7.6896 0.939 30.1149 5.26 229.4 23 49.0 7.6888 0.961 30.1215 5.26 229.4 22 50.0 7.6887 0.981 30.1242 5.25 229.0 25 51.0 7.6884 0.989 30.1293 5.25 229.2 24 52.0 7.6884 0.944 30.1351 5.25 229.1 26 53.0 7.6882 0.980 30.1428 5.25 228.8 27 54.0 7.6880 0.994 30.1474 5.23 228.3 25 55.0 7.6884 0.931 30.1530 5.21 227.1 26 56.0 7.6894 0.960 30.1604 5.19 226.2 22 57.0 7.6918 0.971 30.1653 5.18 226.0 25 58.0 7.6929 0.947 30.1795 5.21 227.4 25 59.0 7.6939 0.930 30.1909 5.25 229.0 27 60.0 7.6904 0.916 30.2072 5.26 229.4 24 61.0 7.6858 0.911 30.2088 5.23 228.3 27 62.0 7.6846 0.879 30.2137 5.22 227.8 25