*2014/11/20 09:58:41.14 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2013/08/22 13:29:07.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 5 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 3D50D177 NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 5 2 Bottle:Firing_Sequence n/a 1 5 3 Pressure decibar 101.106 271.647 4 Depth metres 100.0507 268.8938 5 Temperature:Primary 'deg C (ITS90)' -1.4353 -0.2192 6 Transmissivity %/metre 66.9 73.3 7 Fluorescence:URU:Seapoint mg/m^3 0.8E-01 0.94E-01 8 Turbidity:Seapoint FTU 13.535 18.762 9 PAR uE/m^2/sec 0.556 0.594 10 PAR:Reference uE/m^2/sec 93.918 139.15 11 Salinity:T0:C0 PSS-78 32.7722 34.4202 12 Oxygen:Dissolved:SBE mL/L 5.271 6.355 13 Oxygen:Dissolved:SBE umol/kg 228.98 276.42 14 Number_of_bin_records n/a 41 41 15 Sample_Number n/a 378 382 16 Salinity:Bottle PSS-78 32.7783 34.4166 17 Flag:Salinity:Bottle n/a 18 Chlorophyll:Extracted mg/m^3 0.1E-01 0.3E-01 19 Flag:Chlorophyll:Extracted n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F R4 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 7 F ' ' 1 10 -99 ' ' 7 F ' ' 1 11 -99 ' ' 9 F ' ' 4 12 -99 ' ' 7 F ' ' 2 13 -99 ' ' 6 F ' ' 1 14 ' ' ' ' 5 I I 0 15 -99 ' ' 5 I I 0 16 -99 ' ' 9 F R4 4 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2013-06 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Beaufort Regional Environmental Assessment SCIENTIST : Eert J. PLATFORM : Frosti *LOCATION GEOGRAPHIC AREA : Beaufort Sea STATION : CBH_06_1 EVENT NUMBER : 46 LATITUDE : 71 12.03540 N ! (deg min) LONGITUDE : 124 40.89000 W ! (deg min) ALTIMETER (M) : 4.88 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0415 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4444 Conductivity ' ' 3209 'Pressure:Strain Gauge' ' ' 0603 'Oxygen:SBE 43' ' ' 1202 Fluorometer:Seapoint ' ' 2979 'Turbidity Meter:Seapoint' ' ' 11074 Transmissometer:Chelsea/Seatech ' ' CST-1047DR Altimeter ' ' 41098 'User Polynomial' ' ' ' ' PAR/Irradiance:Biospherical/Licor ' ' 20446 Unavailable ' ' ' ' 'SPAR/Surface Irradiance' ' ' 20317 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.5 Comments from secondary file: P:\Cruise_Data_Processing\2013-06\Hydro-PAR\2013-06-0046.avg2 ------------------------------------------------------------- SOFTWARE VERSION SEASAVE V 7.22.5 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------ ------ ---------- -------- --------- --------- SBE_IOS 3.3 2014/02/22 17:13:52 205 205 ADDSAMP 3.6 2014/02/25 15:56:44 205 205 BINAVE 4.1.1 2014/02/25 15:56:53 205 5 MERGE 3.5 2014/03/03 17:04:04 5 5 CLEAN 5.1 2014/03/03 17:04:48 5 5 SORT 3.6 2014/03/03 17:05:11 5 5 REMOVECH 8.2 2014/03/03 17:05:19 5 5 MERGE 3.5 2014/04/15 13:46:27 5 5 CHGUNITS 3.1 2014/04/15 13:52:34 5 5 DERIVEDQ 3.8.1 2014/04/15 15:24:53 5 5 REORDER 1.3 2014/04/15 15:27:22 ? ? HDREDIT2 2.6 2014/04/15 15:31:43 ? ? CHANGE_FLAGS 2.0 2014/11/20 09:58:41 5 5 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2013-06\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2014/03/03 17:04:04 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2013-06\Processing\hydro\2013-06-0046.samavg Secondary file: P:\Cruise_Data_Processing\2013-06\Processing\hydro\2013-06-0046.mrgcln1s -SORT parameters: 2014/02/27 15:10:20 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2014/03/03 17:04:46 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -SORT parameters: 2014/03/03 17:05:11 Sorted in ascending order of channel Pressure* -REMOVECH 2014/03/03 17:05:19 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] PAR [uE/m^2/sec] Altimeter [metres] uploy0 Descent_Rate [m/s] Flag -The following MERGE parameters were used: 2014/04/15 13:46:27 Merge Channel: Pressure:StrainGauge Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: PAR Primary file : P:\Cruise_Data_Processing\2013-06\Hydro-PAR\2013-06-0046.mrgrem Secondary file: P:\Cruise_Data_Processing\2013-06\Hydro-PAR\2013-06-0046.avg2 Comments from secondary file: P:\Cruise_Data_Processing\2013-06\Hydro-PAR\2013-06-0046.avg2 ------------------------------------------------------------- -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -SORT parameters: 2014/04/15 13:42:41 Sorted in ascending order of channel Pressure:StrainGauge -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -The following DERIVEQ parameters were used: 2014/04/15 15:24:53 Reference channel for pressure is: Pressure* Reference channel for temperature is: Temp* Reference channel for conductivity ratio is: Cond* Reference channel for salinity is: Sal* Reference channel for oxygen is: Oxygen:Dissolved:SBE [umol/kg] Computed properties Derived Properties Ref Press Temp Type Replace ------------------ --------- --------- ------- Depth Insitu n/a YES -HEADER EDITS: 2014/04/15 15:31:43 Applied edit header: P:\Cruise_Data_Processing\2013-06\DOC\Hydro\2013-06-bot-hdr-par.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 8: Turbidity:Seapoint [FTU] Format: F8.3 ==> F7.1 Channel 9: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 10: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 16: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 17: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 18: Chlorophyll:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 19: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number $END *COMMENTS Comments from secondary file: P:\Cruise_Data_Processing\2013-06\Hydro-PAR\2013-06-0046.avg2 ------------------------------------------------------------- SBE HEADER Sea-Bird SBE 25 Data File: FileName = C:\Documents and Settings\eertj\Desktop\2013-06 BREA\Data\CTD\raw\2 013-06-0046.hex Software Version Seasave V 7.22.5 Temperature SN = 4444 Conductivity SN = 3209 Append System Time to Every Scan System UpLoad Time = Aug 22 2013 06:29:12 NMEA Latitude = 71 12.0354 N NMEA Longitude = 124 40.8900 W NMEA UTC (Time) = Aug 22 2013 13:29:07 Store Lat/Lon Data = Append to Every Scan Ship: frosti Station: cbh_06_1 Operator: 275 m 5 niskins Real-Time Sample Interval = 0.1250 seconds System UTC = Aug 22 2013 13:29:12 # nquan = 6 # nvalues = 205 # units = specified # name 0 = prSM: Pressure, Strain Gauge [db] # name 1 = par: PAR/Irradiance, Biospherical/Licor # name 2 = bpos: Bottle Position in Carousel # name 3 = nbf: Bottles Fired # name 4 = scan: Scan Count # name 5 = flag: 0.000e+00 # interval = seconds: 0.125 # start_time = Aug 22 2013 13:29:12 [System UTC, first data scan.] # bad_flag = -9.990e-29 # # # # # 4444 # 18-Oct-12 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.33817228e-003 # 6.36466647e-004 # 2.07744601e-005 # 1.74796127e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3209 # 18-Oct-12 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.03377297e+001 # 1.50470391e+000 # 2.92913126e-004 # 6.40735600e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0603 # 20 Mar 07 # 9.010146e+002 # -2.511654e-001 # -6.469041e-008 # 0.00000 # # # # # # 1202 # 14-Nov-12 # 1 # # # 0.0000 # 3.4280e-001 # -0.5190 # 1.35e-004 # 0.0014 # 0.0 # # # # 3.8390e-001 # -0.5302 # -3.2887e-003 # 1.7289e-004 # -2.3225e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 2.4800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2979 # unknown # # 1 # 0.000 # # # # # # 11074 # unknown # # 0 # 1.000 # # # # # # CST-1047DR # 2013-06-05 # 18.7590 # -1.2570 # 0.025 # # # # # # 41098 # # 15.000 # 0.000 # # # # # # # # isus v3 # 0.00000000 # 1.00000000 # 0.00000000 # 0.00000000 # # # # # # 20446 # 2012/12/7 # -0.76400000 # -3.50300000 # 0.14434300 # 1.00000000 # 0.00000000 # # # # # # # # # 20317 # 2008/03/24 # 1676.60000000 # 1.00000000 # # # # datcnv_date = Apr 15 2014 13:33:20, 7.22.5 # datcnv_in = P:\Cruise_Data_Processing\2013-06\RAW\CTD\raw\2013-06-0046.hex P:\ Cruise_Data_Processing\2013-06\DOC\2013-06-ctd1-par.xmlcon # datcnv_bottle_scan_range_source = BL file # datcnv_scans_per_bottle = 41 END* Analysis methods: ----------------- Extracted chlorophyll average values are available in spreadsheet 2013-06-chl*.xls. Salinity samples were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 3 to 4 months after collection. Analysis details are in file QF2013-06SAL*.xls. Duplicates were analyzed and may be found in file 2013-06-salinity-duplicate-study.xlsx. The precision is lower than usual. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- No recalibration was applied to these data. Post-cruise calibrations show no significant drift in conductivity and dissolved oxygen. SeaCat salinity errors are expected to be as high as 0.05 units in areas of high gradients. For these data temperature and salinity gradients were not extreme, so the error due to mismatch in T and C is estimated to be up to 0.02 in the top 100m and 0.005 below that, though editing and metre-averaging should reduce the errors somewhat. ISUS data were removed because there were no useful signals. PAR, PAR:Reference, Dissolved Oxygen, Transmissivity and Fluorescence data are nominal and have not been edited, except that some records were removed in the course of editing temperature and salinity. WARNING: There are concerns about how well the CTD data matches the bottle data especially near the surface, due to incomplete flushing of the Niskin bottles. In some cases the CTD had begun to rise before the bottle was fired, making the flushing problem worse. Where this led to significant outliers flag 2 and a comment were added, but there are probably many other cases that were not noticed. For details on the processing see the report: 2013-06-proc.doc. --------------------------------------------------------------------------------- !1- 2- --3--- --4--- ---5---- --6-- ---7--- --8--- --9--- --10-- ---11--- --12-- --13- -14- -15- ---16--- 17 --18-- 19 !Bo Bo Pressu Depth Temperat Trans Fluores Turbid PAR PAR: Salinity Oxygen Oxyge Numb Samp Salinity Fl Chloro Fl !tt tt re ure: missi cence: ity: Refere :T0:C0 : n: er_o le_ :Bottle ag phyll: ag !~u ~u Primary vity URU: Seapoi nce Dissol Disso ~bin Numb ~o Extrac ~a !mb en Seapoin nt ved: lved: _rec er tt ted ct !er ce t SBE SBE ords le ed !-- -- ------ ------ -------- ----- ------- ------ ------ ------ -------- ------ ----- ---- ---- -------- -- ------ -- *END OF HEADER 5 5 101.1 100.1 -1.4353 73.3 0.094 18.8 0.6 131.6 32.7722 6.36 276.4 41 382 32.7783 0 0.03 0 4 4 126.3 125.0 -1.4271 73.3 0.082 14.4 0.6 139.2 32.9371 6.22 270.3 41 381 32.9496 0 -99.00 0 3 3 151.4 149.8 -1.3741 73.3 0.085 13.5 0.6 122.3 33.1039 6.06 263.6 41 380 33.1136 0 0.02 0 2 2 202.3 200.3 -1.1009 73.3 0.080 13.6 0.6 108.8 33.5732 5.68 246.7 41 379 33.5809 0 -99.00 0 1 1 271.6 268.9 -0.2192 66.9 0.081 15.3 0.6 93.9 34.4202 5.27 229.0 41 378 34.4166 0 0.01 0