*2014/11/20 09:58:20.94 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/17 22:50:01.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 19A1FAF0 NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle:Firing_Sequence n/a 1 24 2 Bottle_Number n/a 1 24 3 Pressure decibar 1.476 308.972 4 Temperature:Secondary 'deg C (ITS90)' 8.8981 11.0792 5 Transmissivity %/metre 24.2 58.8 6 Fluorescence:URU:Seapoint mg/m^3 0.147 0.623 7 Fluorescence:URU:Wetlabs mg/m^3 0.132 0.877 8 Salinity:T1:C1 PSS-78 25.8019 31.3632 9 Oxygen:Dissolved:SBE mL/L 2.771 5.844 10 Oxygen:Dissolved:SBE umol/kg 120.7721 255.8746 11 Number_of_bin_records n/a 44 241 12 Sample_Number n/a 1 24 13 Salinity:Bottle PSS-78 26.0651 31.3525 14 Flag:Salinity:Bottle n/a 15 Oxygen:Dissolved mL/L 2.795 5.756 16 Flag:Oxygen:Dissolved n/a 17 Nitrate_plus_Nitrite umol/L 16.2 29.4 18 Flag:Nitrate_plus_Nitrite n/a 19 Silicate umol/L 35.3 56.2 20 Flag:Silicate n/a 21 Phosphate umol/L 1.54 2.53 22 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 12 -99 ' ' 5 I I 0 13 -99 ' ' 9 F R4 4 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 8 F R4 3 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 6 F R4 1 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2012-71 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Moorings SCIENTIST : Johannessen S. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : SOGS EVENT NUMBER : 1 LATITUDE : 49 1.38000 N ! (deg min) LONGITUDE : 123 25.67000 W ! (deg min) WATER DEPTH : 316 ALTIMETER (M) : 6.59 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $REMARKS SOFTWARE VERSION SEASAVE V 7.21G $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/01/16 10:14:19 3618 3618 CLEAN 5.0.4 2013/01/16 10:14:40 3618 3618 ADDSAMP 3.5 2013/01/16 10:24:11 3618 3618 BINAVE 4.1.1 2013/01/16 10:24:25 3618 24 MERGE 3.4 2013/01/17 13:55:34 24 24 CLEAN 5.1 2013/03/05 17:02:22 24 24 CALIB 11.7 2013/03/05 17:02:28 24 24 SORT 3.6 2013/03/05 17:02:41 24 24 REMOVECH 8.1.1 2013/03/06 09:59:11 24 24 CHGUNITS 3.0 2013/03/06 10:00:28 24 24 REORDER 1.3 2013/03/06 10:01:19 ? ? HDREDIT2 2.6 2013/03/06 10:08:17 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:59 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:58:20 24 24 $END $REMARKS -CLEAN functions: 2013/01/16 10:14:40 Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2012-71\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2013/01/17 13:55:34 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2012-71\Processing\hydro\2012-71-0001.samavg Secondary file: P:\Cruise_Data_Processing\2012-71\Processing\hydro\2012-71-0001.mrgcln1s -SORT parameters: 2013/01/16 10:35:57 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2013/03/05 17:02:22 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2013/03/05 17:02:28 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-71\Processing\doc\2012-71-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 19 Oxygen:Dissolved:SBE mL/L 10 0.5180000E-01 0.1045700E+01 -SORT parameters: 2013/03/05 17:02:41 Sorted in ascending order of channel Pressure -REMOVECH 2013/03/06 09:59:11 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Altimeter [metres] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2013/03/06 10:08:17 Applied edit header: P:\Cruise_Data_Processing\2012-71\Processing\doc\HYDRO\2012-71-bot-hdr.txt Channel 1: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 7: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 8: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 13: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 14: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 15: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 16: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 17: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Channel 18: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 19: Silicate [umol/L] Units: ==> umol/L Channel 20: Flag:Silicate [n/a] Units: ==> n/a Channel 21: Phosphate [umol/L] Units: ==> umol/L Channel 22: Flag:Phosphate [n/a] Units: ==> n/a Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint $END *COMMENTS Sample_Number 17: SAL: Reading bounced around a bit but did not seem to affect result Sample_Number 24: SAL: Replicate outliers Sample_Number 1: OXY: Replicate outliers. Sample_Number 3: OXY: Titration was not ideal but endpoint ok. Analysis methods: ----------------- Oxygen samples were analyzed at sea on an automated Winkler titration system (Brinkmann Dosimat model 765 and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2012-71oxy*.xls. Salinity samples were collected in 200 mL type ll glass bottles with reusable silicone inserts supplied by Xiamen Cuten Accessories Industry Limited and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 24 days after collection. Full details including a duplicate analysis are in file QF2012-71SAL*.xls. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer and analyzed later at the Institute of Ocean Sciences using an Astoria analyzer following methods described in Barwell-Clarke and Whitney (1996). File QF2012-71nuts*.xls includes the raw data and a precision study. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers Data Processing Notes: ---------------------- Transmissivity and fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Data from the pH:SBE channel have been removed from this file because there was no field calibration information available at the time of processing. For further processing details see the processing report 2012-71-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.518E-01 1.0457) $END !1- 2- --3--- ---4---- --5-- ---6--- ---7--- ---8---- --9--- --10- -11- -12- ---13--- 14 ---15-- 16 --17- 18 --19- 20 --21-- 22 !Bo Bo Pressu Temperat Trans Fluores Fluores Salinity Oxygen Oxyge Numb Samp Salinity Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl !tt tt re ure: missi cence: cence: :T1:C1 : n: er_o le_ :Bottle ag Dissolv ag te_ ag ate ag ate ag !~u ~u Secondar vity URU: URU: Dissol Disso ~bin Numb ~o ed ~o plus_ ~t ~i ~p !en mb y Seapoin Wetlabs ved: lved: _rec er tt lv Nitri ri ca ha !ce er t SBE SBE ords le ed te te te te !-- -- ------ -------- ----- ------- ------- -------- ------ ----- ---- ---- -------- -- ------- -- ----- -- ----- -- ------ -- *END OF HEADER 23 23 1.5 11.0772 29.8 0.568 0.819 25.8798 5.81 254.4 63 23 26.2062 0 5.756 6 -99.0 0 -99.0 0 -99.00 0 24 24 1.6 11.0792 29.5 0.562 0.840 25.8019 5.84 255.9 241 24 26.0651 36 -99.000 0 16.2 6 35.5 6 1.54 6 22 22 5.8 11.0122 48.5 0.471 0.651 27.7073 5.49 239.8 241 22 27.7591 0 -99.000 0 17.8 0 35.3 0 1.66 0 21 21 5.8 11.0140 48.5 0.447 0.620 27.7042 5.49 239.9 57 21 27.7914 0 5.413 0 -99.0 0 -99.0 0 -99.00 0 20 20 11.2 10.6507 54.9 0.454 0.674 28.4152 5.11 223.1 241 20 28.5593 0 -99.000 0 20.2 0 37.3 0 1.83 0 19 19 11.2 10.6476 55.1 0.453 0.662 28.4215 5.12 223.7 62 19 28.5517 0 4.831 0 -99.0 0 -99.0 0 -99.00 0 17 17 16.0 10.1773 56.3 0.623 0.850 28.7906 4.37 191.0 48 17 28.8621 2 4.247 0 -99.0 0 -99.0 0 -99.00 0 18 18 16.0 10.1627 56.1 0.575 0.877 28.8003 4.36 190.2 241 18 28.8757 0 -99.000 0 25.1 0 45.0 0 2.13 0 15 15 26.2 9.5590 58.7 0.230 0.251 29.3179 3.82 166.9 51 15 29.3434 0 3.786 0 -99.0 0 -99.0 0 -99.00 0 16 16 26.2 9.5602 58.8 0.220 0.262 29.3174 3.83 167.1 241 16 -99.0000 0 -99.000 0 27.8 0 50.8 0 2.27 0 14 14 51.5 9.1894 58.2 0.162 0.157 29.9113 3.42 149.1 241 14 29.9383 0 -99.000 0 29.2 0 50.0 0 2.32 0 13 13 51.5 9.1896 58.4 0.166 0.144 29.9113 3.42 149.2 63 13 29.9375 0 3.380 0 -99.0 0 -99.0 0 -99.00 0 11 11 76.8 9.5922 49.5 0.162 0.163 30.3439 3.25 141.6 55 11 30.3460 0 3.243 0 -99.0 0 -99.0 0 -99.00 0 12 12 76.8 9.5922 49.4 0.162 0.162 30.3441 3.24 141.5 241 12 30.3456 0 -99.000 0 27.9 0 46.8 0 2.20 0 10 10 102.1 9.4767 51.0 0.165 0.148 30.5850 3.18 138.5 241 10 30.6060 0 -99.000 0 28.0 0 48.2 0 2.27 0 9 9 102.1 9.4782 50.6 0.157 0.162 30.5841 3.18 138.5 57 9 30.5925 0 3.212 0 -99.0 0 -99.0 0 -99.00 0 7 7 152.4 9.1416 51.8 0.156 0.137 30.8407 3.05 132.9 44 7 30.8462 0 3.033 6 -99.0 0 -99.0 0 -99.00 0 8 8 152.5 9.1413 51.9 0.152 0.143 30.8414 3.05 132.9 241 8 30.8475 6 -99.000 0 29.0 6 53.6 6 2.35 6 5 5 202.9 8.9260 55.2 0.149 0.135 30.9243 3.01 131.4 85 5 30.9417 0 3.029 0 -99.0 0 -99.0 0 -99.00 0 6 6 202.9 8.9235 55.1 0.147 0.132 30.9248 3.02 131.5 241 6 30.9403 0 -99.000 0 29.0 0 55.4 0 2.42 0 3 3 256.2 9.0704 47.5 0.152 0.156 31.1252 2.98 129.7 88 3 31.1339 0 2.958 2 -99.0 0 -99.0 0 -99.00 0 4 4 256.2 9.0731 48.1 0.154 0.145 31.1219 2.97 129.6 241 4 31.1345 0 -99.000 0 27.9 0 50.7 0 2.31 0 1 1 309.0 8.8983 24.2 0.186 0.240 31.3632 2.77 120.8 53 1 31.3382 0 2.795 36 -99.0 0 -99.0 0 -99.00 0 2 2 309.0 8.8981 24.3 0.180 0.216 31.3626 2.77 120.8 241 2 31.3525 6 -99.000 0 29.4 6 56.2 6 2.53 6