*2013/12/16 15:38:56.11 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/19 18:43:38.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 123 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : E7DE8D26 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.314 126.942 2 Temperature:Secondary 'deg C (ITS90)' 7.9661 9.3499 3 Fluorescence:URU:Wetlabs mg/m^3 0.171 1.084 4 Salinity:T1:C1 PSS-78 32.3206 32.9147 5 Oxygen:Dissolved:SBE mL/L 3.845 5.711 6 Oxygen:Dissolved:SBE umol/kg 167.3639 248.745 7 Number_of_bin_records n/a 12 69 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : T 03 EVENT NUMBER : 172 LATITUDE : 51 8.34000 N ! (deg min) LONGITUDE : 128 36.11000 W ! (deg min) WATER DEPTH : 137 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:35:55 8718 8718 CLEAN 5.1 2013/03/30 16:43:44 8718 8718 SHIFTDAT 3.4 2013/04/02 09:23:54 8718 8718 SHIFTDAT 3.4 2013/04/02 11:05:29 8718 8718 SHIFTDAT 3.4 2013/04/02 12:55:19 8718 8718 SHIFTDAT 3.4 2013/04/02 13:36:04 8718 8718 DELETE 6.3 2013/04/02 13:47:03 8718 3412 CTDEDIT 4.61 2013/04/11 09:11:35 3412 3199 CALIB 11.7 2013/04/12 14:14:33 3199 3199 FILTERS 4.3 2013/04/12 14:25:40 3199 3199 BINAVE 4.1.1 2013/04/12 14:27:53 3199 123 REMOVECH 8.1.1 2013/04/12 14:56:39 123 123 CHGUNITS 3.0 2013/04/12 14:57:09 123 123 REORDER 1.3 2013/04/12 15:11:09 ? ? HDREDIT2 2.6 2013/04/12 15:13:42 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:56 123 123 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 117.48 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/11 09:11:35 213 records were deleted in this editing session. 11 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:14:33 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:39 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:42 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.172.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 19 2012 11:43:16 NMEA Latitude = 51 08.34 N NMEA Longitude = 128 36.11 W NMEA UTC (Time) = Oct 19 2012 18:43:38 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: T 03 Depth(m): 137 System UTC = Oct 19 2012 10:43:16 # nquan = 15 # nvalues = 8718 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8718 # span 1 = 3.096, 127.480 # span 2 = 7.9565, 9.3635 # span 3 = 7.9553, 9.3630 # span 4 = 3.428431, 3.492424 # span 5 = 3.428485, 3.492565 # span 6 = 1.6359, 2.2687 # span 7 = 0.0957, 1.9846 # span 8 = 7.999, 8.152 # span 9 = -1.898, 1.699 # span 10 = 0, 1 # span 11 = 32.3135, 32.9178 # span 12 = 32.3141, 32.9202 # span 13 = 3.79356, 5.68411 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 19 2012 18:43:38 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:06:01, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0172.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:16:26, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-017 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:59, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-01 72.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:45, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0172.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:49:20, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0172.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.3 9.3453 0.908 32.3217 5.71 248.7 17 6.0 9.3459 0.924 32.3216 5.71 248.7 69 7.0 9.3463 0.928 32.3214 5.71 248.7 31 8.0 9.3469 0.965 32.3212 5.71 248.6 26 9.1 9.3484 1.004 32.3208 5.71 248.5 43 10.0 9.3484 1.014 32.3209 5.71 248.7 44 11.0 9.3483 1.084 32.3211 5.71 248.5 46 12.0 9.3482 1.084 32.3214 5.71 248.7 33 13.0 9.3489 1.060 32.3208 5.71 248.7 22 14.0 9.3489 1.043 32.3207 5.71 248.6 20 15.0 9.3491 1.038 32.3207 5.70 248.4 23 16.0 9.3489 1.036 32.3206 5.71 248.6 40 17.0 9.3488 1.059 32.3206 5.71 248.6 32 18.0 9.3499 1.033 32.3207 5.70 248.3 28 19.0 9.3498 1.007 32.3206 5.70 248.4 24 20.0 9.3499 0.994 32.3207 5.70 248.3 22 21.0 9.3495 1.000 32.3209 5.69 247.9 26 22.0 9.3485 0.989 32.3211 5.69 248.0 26 23.0 9.3482 1.036 32.3212 5.71 248.5 25 24.0 9.3483 1.024 32.3210 5.70 248.4 28 25.0 9.3484 0.979 32.3207 5.70 248.3 34 26.0 9.3470 0.976 32.3223 5.70 248.4 32 27.0 9.3466 0.990 32.3228 5.70 248.4 29 28.0 9.3466 0.982 32.3227 5.69 247.8 23 29.0 9.3463 0.961 32.3233 5.69 247.8 19 30.0 9.3458 0.935 32.3245 5.69 247.9 19 31.0 9.3453 0.972 32.3252 5.68 247.6 19 32.1 9.3428 0.996 32.3265 5.67 247.0 32 32.7 9.3419 0.991 32.3267 5.67 247.1 15 34.1 9.3410 0.985 32.3273 5.68 247.5 20 35.0 9.3406 0.947 32.3274 5.68 247.6 23 36.0 9.3397 0.968 32.3278 5.68 247.5 29 37.0 9.3394 1.021 32.3282 5.68 247.3 32 38.0 9.3395 0.977 32.3280 5.67 247.0 25 39.0 9.3392 0.947 32.3279 5.67 247.2 20 40.0 9.3385 0.940 32.3286 5.67 247.0 20 41.0 9.3383 0.935 32.3288 5.66 246.6 20 42.0 9.3383 0.972 32.3294 5.66 246.7 30 42.7 9.3386 0.992 32.3298 5.67 247.2 13 44.1 9.3387 1.012 32.3302 5.67 246.8 24 45.0 9.3391 0.931 32.3306 5.66 246.6 23 46.0 9.3393 0.921 32.3309 5.66 246.7 21 47.0 9.3389 0.896 32.3313 5.66 246.4 17 48.0 9.3379 0.888 32.3318 5.65 246.2 20 49.0 9.3389 0.927 32.3318 5.65 246.1 21 50.0 9.3374 0.917 32.3320 5.65 246.0 29 51.0 9.3341 0.922 32.3327 5.65 245.9 43 52.0 9.3327 0.905 32.3331 5.63 245.2 29 53.0 9.3314 0.841 32.3349 5.58 243.2 23 54.0 9.3311 0.806 32.3355 5.55 241.6 22 55.0 9.3275 0.830 32.3495 5.53 240.9 24 56.0 9.3115 0.810 32.3671 5.53 240.6 36 57.0 9.3048 0.760 32.3712 5.52 240.5 26 58.0 9.3045 0.738 32.3714 5.51 240.1 19 59.0 9.3025 0.736 32.3728 5.50 239.8 18 60.0 9.2963 0.747 32.3764 5.50 239.6 20 61.0 9.2890 0.786 32.3803 5.50 239.5 26 62.0 9.2791 0.795 32.3854 5.50 239.4 28 63.0 9.2767 0.770 32.3868 5.49 238.9 33 64.0 9.2786 0.761 32.3861 5.48 238.6 23 65.0 9.2748 0.755 32.3880 5.46 238.0 26 66.0 9.2619 0.742 32.3945 5.44 236.9 30 67.0 9.2587 0.719 32.3968 5.42 236.2 22 68.0 9.2534 0.692 32.3990 5.41 235.7 16 69.0 9.2446 0.673 32.4027 5.40 235.0 16 70.0 9.2398 0.637 32.4043 5.38 234.3 18 71.0 9.2323 0.668 32.4075 5.37 233.7 24 72.1 9.2149 0.670 32.4139 5.33 232.1 50 72.9 9.2022 0.699 32.4191 5.27 229.4 41 74.0 9.1804 0.622 32.4279 5.22 227.4 25 75.0 9.1638 0.594 32.4351 5.18 225.5 20 76.0 9.1541 0.569 32.4392 5.12 223.2 17 77.0 9.1420 0.526 32.4441 5.08 221.3 15 78.0 9.1292 0.542 32.4494 5.05 219.8 16 79.0 9.1029 0.539 32.4602 5.02 218.6 18 80.0 9.0655 0.508 32.4753 4.98 216.7 29 81.0 9.0095 0.572 32.4981 4.83 210.5 42 82.0 8.9259 0.496 32.5300 4.76 207.1 30 83.0 8.8795 0.412 32.5493 4.70 204.8 26 84.0 8.8384 0.427 32.5658 4.66 203.0 19 85.0 8.8110 0.394 32.5766 4.64 202.2 17 86.0 8.7765 0.387 32.5906 4.63 201.6 17 87.0 8.7481 0.375 32.6021 4.62 201.2 20 88.0 8.7303 0.366 32.6083 4.61 200.9 23 89.0 8.7234 0.426 32.6112 4.61 200.6 40 90.0 8.7233 0.412 32.6116 4.58 199.3 39 91.0 8.7195 0.393 32.6130 4.53 197.2 23 92.0 8.7066 0.386 32.6176 4.48 195.2 21 93.0 8.6806 0.390 32.6255 4.44 193.1 23 94.0 8.6233 0.373 32.6470 4.38 190.9 29 95.0 8.5724 0.355 32.6654 4.34 189.0 28 96.0 8.5133 0.332 32.6864 4.31 187.6 22 97.0 8.4831 0.310 32.6969 4.29 186.8 19 98.0 8.4525 0.285 32.7074 4.27 185.9 21 99.0 8.4371 0.275 32.7127 4.25 185.0 28 100.1 8.4069 0.272 32.7228 4.23 184.1 30 101.0 8.3860 0.279 32.7299 4.21 183.5 31 102.0 8.3671 0.275 32.7362 4.20 182.8 22 103.0 8.3414 0.244 32.7450 4.20 182.6 21 104.0 8.3346 0.224 32.7481 4.18 182.1 27 105.0 8.3241 0.241 32.7524 4.17 181.5 33 106.0 8.3068 0.230 32.7595 4.15 180.6 27 107.0 8.2889 0.226 32.7666 4.13 180.0 21 108.0 8.2834 0.221 32.7695 4.13 179.8 19 109.0 8.2599 0.217 32.7784 4.13 179.7 18 110.1 8.2445 0.228 32.7852 4.12 179.3 34 111.0 8.2351 0.241 32.7890 4.07 177.1 30 112.0 8.1733 0.215 32.8127 4.04 176.0 20 113.0 8.1521 0.189 32.8241 4.03 175.4 15 114.0 8.1414 0.199 32.8298 4.02 175.1 16 115.0 8.1168 0.218 32.8404 4.02 174.8 17 116.0 8.1014 0.171 32.8478 4.01 174.4 23 117.0 8.0948 0.203 32.8515 4.00 174.2 39 118.0 8.0905 0.203 32.8548 3.99 173.7 50 119.0 8.0888 0.206 32.8566 3.98 173.1 30 120.0 8.0864 0.176 32.8590 3.96 172.2 19 121.0 8.0826 0.188 32.8611 3.95 171.8 12 122.0 8.0774 0.193 32.8644 3.95 171.8 15 123.0 8.0644 0.199 32.8701 3.94 171.6 18 124.0 8.0528 0.194 32.8758 3.94 171.3 28 125.0 8.0459 0.205 32.8792 3.87 168.2 27 126.0 8.0098 0.203 32.8953 3.85 167.4 25 126.9 7.9661 0.176 32.9147 3.85 167.6 24