*2013/12/16 15:38:56.04 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/19 15:43:08.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 47 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 75670DE9 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.317 50.961 2 Temperature:Secondary 'deg C (ITS90)' 9.3862 9.9204 3 Fluorescence:URU:Wetlabs mg/m^3 0.518 1.075 4 Salinity:T1:C1 PSS-78 32.2035 32.42 5 Oxygen:Dissolved:SBE mL/L 5.12 5.657 6 Oxygen:Dissolved:SBE umol/kg 222.9888 246.4371 7 Number_of_bin_records n/a 17 64 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : T 05 EVENT NUMBER : 166 LATITUDE : 51 0.02000 N ! (deg min) LONGITUDE : 128 52.08000 W ! (deg min) WATER DEPTH : 61 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:35:52 5184 5184 CLEAN 5.1 2013/03/30 16:43:37 5184 5184 SHIFTDAT 3.4 2013/04/02 09:23:50 5184 5184 SHIFTDAT 3.4 2013/04/02 11:05:26 5184 5184 SHIFTDAT 3.4 2013/04/02 12:55:16 5184 5184 SHIFTDAT 3.4 2013/04/02 13:36:00 5184 5184 DELETE 6.3 2013/04/02 13:47:00 5184 1679 CTDEDIT 4.61 2013/04/10 17:29:19 1679 1526 CALIB 11.7 2013/04/12 14:14:32 1526 1526 FILTERS 4.3 2013/04/12 14:25:38 1526 1526 BINAVE 4.1.1 2013/04/12 14:27:52 1526 47 REMOVECH 8.1.1 2013/04/12 14:56:38 47 47 CHGUNITS 3.0 2013/04/12 14:57:09 47 47 REORDER 1.3 2013/04/12 15:11:09 ? ? HDREDIT2 2.6 2013/04/12 15:13:42 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:56 47 47 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 41.12 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/10 17:29:19 153 records were deleted in this editing session. 21 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:14:32 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:38 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:42 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.166.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 19 2012 08:43:02 NMEA Latitude = 51 00.02 N NMEA Longitude = 128 52.08 W NMEA UTC (Time) = Oct 19 2012 15:43:08 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: T 05 Depth(m): 61 System UTC = Oct 19 2012 07:43:02 # nquan = 15 # nvalues = 5184 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5184 # span 1 = 2.830, 51.124 # span 2 = 9.3854, 9.9572 # span 3 = 9.3848, 9.9562 # span 4 = 3.503425, 3.530686 # span 5 = 3.503630, 3.530833 # span 6 = 2.0709, 2.2687 # span 7 = 0.4132, 3.6671 # span 8 = 8.118, 8.179 # span 9 = -1.285, 1.435 # span 10 = 0, 1 # span 11 = 32.1971, 32.4186 # span 12 = 32.1940, 32.4209 # span 13 = 4.77165, 5.61925 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 19 2012 15:43:08 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:05:59, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0166.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:16:24, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-016 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:58, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-01 66.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:44, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0166.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:49:18, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0166.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.3 9.9144 0.987 32.2038 5.63 245.3 17 6.0 9.9204 0.981 32.2036 5.63 245.5 63 7.0 9.9173 0.994 32.2035 5.64 245.9 35 8.1 9.9178 1.017 32.2036 5.64 245.8 64 8.9 9.9188 1.035 32.2037 5.64 245.8 35 10.0 9.9161 1.012 32.2037 5.66 246.4 25 10.9 9.9164 1.012 32.2036 5.65 246.1 30 12.0 9.9166 1.043 32.2037 5.65 246.1 32 13.0 9.9166 1.033 32.2038 5.64 245.8 24 14.0 9.9175 1.074 32.2038 5.64 245.7 24 14.9 9.9196 1.044 32.2037 5.65 246.2 26 16.1 9.9204 1.072 32.2038 5.64 245.9 19 17.0 9.9181 1.075 32.2039 5.63 245.1 22 18.1 9.9169 1.027 32.2087 5.58 243.3 36 18.9 9.9106 0.991 32.2241 5.48 238.7 43 20.0 9.8664 0.930 32.2432 5.40 235.1 27 21.0 9.7355 0.838 32.2874 5.34 232.4 32 21.9 9.6505 0.745 32.3205 5.31 231.3 35 22.9 9.6119 0.690 32.3383 5.28 230.0 43 24.0 9.6083 0.679 32.3413 5.26 229.3 25 25.0 9.6038 0.667 32.3451 5.25 228.7 28 26.0 9.5928 0.645 32.3511 5.24 228.0 38 27.0 9.5761 0.630 32.3593 5.22 227.6 29 28.0 9.5675 0.638 32.3635 5.22 227.3 29 29.0 9.5592 0.589 32.3674 5.21 227.0 38 30.0 9.5472 0.626 32.3713 5.19 226.1 43 30.9 9.5336 0.627 32.3749 5.19 226.0 30 32.0 9.5264 0.619 32.3782 5.18 225.7 24 33.0 9.5186 0.623 32.3811 5.18 225.4 23 34.0 9.5126 0.594 32.3826 5.17 225.3 24 35.0 9.5025 0.600 32.3849 5.17 225.3 25 36.0 9.4885 0.577 32.3899 5.18 225.6 31 37.0 9.4811 0.576 32.3930 5.15 224.2 26 38.0 9.4734 0.573 32.3952 5.13 223.6 19 39.0 9.4672 0.552 32.3970 5.13 223.6 19 40.0 9.4581 0.558 32.3994 5.14 223.9 26 41.0 9.4446 0.560 32.4032 5.13 223.4 42 42.0 9.4305 0.524 32.4072 5.13 223.4 52 43.0 9.4251 0.539 32.4088 5.13 223.6 54 44.0 9.4230 0.544 32.4096 5.12 223.2 30 45.0 9.4172 0.561 32.4112 5.13 223.4 25 46.0 9.4125 0.533 32.4126 5.12 223.0 30 47.0 9.4002 0.535 32.4159 5.12 223.0 38 48.0 9.3980 0.541 32.4166 5.13 223.3 29 49.0 9.3945 0.538 32.4175 5.13 223.3 30 50.0 9.3936 0.525 32.4179 5.12 223.0 49 51.0 9.3862 0.518 32.4200 5.13 223.5 27