*2013/12/16 15:38:55.23 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/16 21:27:41.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 122 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 96E9B9E4 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.322 124.882 2 Temperature:Secondary 'deg C (ITS90)' 7.5133 8.8536 3 Fluorescence:URU:Wetlabs mg/m^3 0.173 0.513 4 Salinity:T1:C1 PSS-78 30.9286 32.9713 5 Oxygen:Dissolved:SBE mL/L 2.769 5.022 6 Oxygen:Dissolved:SBE umol/kg 120.5142 218.9516 7 Number_of_bin_records n/a 19 49 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : QCST 05 EVENT NUMBER : 115 LATITUDE : 50 50.83000 N ! (deg min) LONGITUDE : 127 18.62000 W ! (deg min) WATER DEPTH : 133 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:34:54 8225 8225 CLEAN 5.1 2013/03/30 16:42:28 8225 8225 SHIFTDAT 3.4 2013/04/02 09:22:54 8225 8225 SHIFTDAT 3.4 2013/04/02 11:04:30 8225 8225 SHIFTDAT 3.4 2013/04/02 11:10:42 8225 8225 SHIFTDAT 3.4 2013/04/02 13:34:51 8225 8225 DELETE 6.3 2013/04/02 13:46:12 8225 3994 CTDEDIT 4.61 2013/04/10 15:32:27 3994 3978 CALIB 11.7 2013/04/12 14:14:02 3978 3978 FILTERS 4.3 2013/04/12 14:25:11 3978 3978 BINAVE 4.1.1 2013/04/12 14:27:35 3978 122 REMOVECH 8.1.1 2013/04/12 14:56:37 122 122 CHGUNITS 3.0 2013/04/12 14:57:08 122 122 REORDER 1.3 2013/04/12 15:11:08 ? ? HDREDIT2 2.6 2013/04/12 15:13:41 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:55 122 122 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 115.36 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/10 15:32:27 16 records were deleted in this editing session. 7 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:14:02 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:37 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:41 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.115.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 16 2012 14:27:34 NMEA Latitude = 50 50.83 N NMEA Longitude = 127 18.62 W NMEA UTC (Time) = Oct 16 2012 21:27:41 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: QCST 05 Depth(m): 133 System UTC = Oct 16 2012 13:27:34 # nquan = 15 # nvalues = 8225 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8225 # span 1 = 3.610, 125.363 # span 2 = 7.5125, 8.8686 # span 3 = 7.5125, 8.8753 # span 4 = 3.306949, 3.394349 # span 5 = 3.306720, 3.394408 # span 6 = 1.2965, 2.0257 # span 7 = 0.0639, 2.0798 # span 8 = 7.846, 7.981 # span 9 = -1.566, 1.197 # span 10 = 0, 1 # span 11 = 30.9170, 32.9705 # span 12 = 30.9203, 32.9722 # span 13 = 2.70807, 5.00545 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 16 2012 21:27:41 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:05:26, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0115.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:59, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-011 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:34, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-01 15.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:18, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0115.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:53, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0115.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records; salinity was cleaned lightly. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.3 8.8536 0.431 30.9286 5.02 219.0 19 5.0 8.8497 0.487 30.9286 4.97 216.8 42 6.0 8.8173 0.483 30.9497 4.83 210.4 42 7.0 8.7740 0.465 31.0109 4.70 204.8 37 8.0 8.7353 0.460 31.0704 4.66 203.0 33 9.0 8.7231 0.481 31.0995 4.63 201.7 30 10.0 8.7310 0.504 31.1058 4.63 201.7 32 11.0 8.7216 0.497 31.1268 4.66 203.2 33 12.0 8.7402 0.481 31.0895 4.63 202.0 29 13.0 8.7329 0.463 31.1093 4.58 199.7 29 14.0 8.7250 0.473 31.1264 4.57 199.1 34 15.0 8.7137 0.498 31.1521 4.55 198.4 34 16.0 8.7200 0.513 31.1473 4.52 197.1 32 17.0 8.7120 0.488 31.1801 4.50 196.1 33 18.0 8.7012 0.451 31.2122 4.48 195.3 31 19.0 8.6962 0.458 31.2284 4.48 195.1 29 20.0 8.6922 0.484 31.2425 4.48 195.4 33 21.0 8.6885 0.465 31.2569 4.50 196.0 33 22.0 8.6872 0.423 31.2647 4.51 196.7 29 23.0 8.6893 0.435 31.2686 4.52 196.8 30 24.0 8.6950 0.472 31.2814 4.50 196.4 37 25.0 8.6889 0.448 31.2908 4.48 195.2 34 26.0 8.6823 0.461 31.2940 4.47 194.7 30 27.0 8.6775 0.418 31.2965 4.47 194.7 32 28.0 8.6769 0.451 31.2985 4.46 194.4 30 29.0 8.6753 0.435 31.3009 4.45 194.0 28 30.0 8.6740 0.432 31.3049 4.44 193.4 33 31.0 8.6712 0.454 31.3111 4.44 193.6 36 32.0 8.6706 0.454 31.3159 4.44 193.4 33 33.0 8.6689 0.442 31.3225 4.43 193.0 33 34.0 8.6669 0.457 31.3234 4.44 193.4 33 35.0 8.6680 0.459 31.3248 4.45 193.9 30 36.0 8.6672 0.421 31.3291 4.45 194.1 29 37.0 8.6665 0.456 31.3329 4.46 194.3 30 38.0 8.6663 0.467 31.3342 4.45 193.9 32 39.0 8.6649 0.458 31.3365 4.45 194.1 34 40.0 8.6637 0.458 31.3386 4.45 193.8 33 41.0 8.6633 0.462 31.3392 4.45 193.9 31 42.0 8.6628 0.484 31.3398 4.44 193.6 33 43.0 8.6628 0.488 31.3405 4.44 193.5 33 44.0 8.6618 0.443 31.3446 4.43 193.3 30 45.0 8.6589 0.440 31.3511 4.42 192.6 31 46.0 8.6571 0.429 31.3598 4.39 191.2 31 47.0 8.6466 0.460 31.3894 4.34 189.2 35 48.0 8.6358 0.416 31.4174 4.26 185.8 35 49.0 8.6154 0.407 31.4693 4.19 182.5 33 50.0 8.5869 0.381 31.5335 4.15 180.7 31 51.0 8.5730 0.381 31.5646 4.12 179.7 32 52.0 8.5687 0.362 31.5742 4.09 178.2 30 53.0 8.5576 0.382 31.5987 4.08 177.6 25 54.0 8.5448 0.359 31.6250 4.06 176.9 32 55.0 8.5353 0.408 31.6402 4.05 176.5 37 56.0 8.5276 0.416 31.6530 4.04 176.1 32 57.0 8.5222 0.390 31.6627 4.03 175.5 31 58.0 8.5059 0.368 31.6873 4.00 174.2 35 59.0 8.4918 0.359 31.7062 3.94 171.6 34 60.0 8.4604 0.394 31.7535 3.87 168.7 28 61.0 8.3537 0.344 31.8990 3.85 167.7 23 62.0 8.3005 0.329 31.9779 3.84 167.4 33 63.0 8.2980 0.309 31.9806 3.84 167.2 32 64.0 8.2947 0.339 31.9846 3.82 166.4 32 65.0 8.2880 0.350 31.9925 3.79 165.3 35 66.0 8.2649 0.345 32.0211 3.75 163.3 34 67.0 8.2346 0.320 32.0597 3.70 161.2 32 68.0 8.1902 0.328 32.1227 3.68 160.4 30 69.0 8.1700 0.300 32.1501 3.67 159.7 31 70.0 8.1644 0.322 32.1600 3.66 159.3 30 71.0 8.1540 0.306 32.1743 3.65 159.0 30 72.0 8.1453 0.296 32.1828 3.65 158.7 34 73.0 8.1434 0.284 32.1854 3.63 158.3 34 74.0 8.1356 0.301 32.1949 3.62 157.9 29 75.0 8.1269 0.294 32.2080 3.61 157.1 31 76.0 8.1147 0.313 32.2225 3.58 155.9 35 77.0 8.1004 0.294 32.2416 3.55 154.7 30 78.0 8.0792 0.285 32.2756 3.52 153.5 29 79.0 8.0618 0.274 32.3039 3.49 151.9 34 80.0 8.0347 0.280 32.3457 3.45 150.3 33 81.0 8.0088 0.266 32.3865 3.44 149.6 28 82.0 7.9986 0.263 32.4005 3.42 149.1 29 83.0 7.9776 0.254 32.4264 3.42 148.7 33 84.0 7.9578 0.259 32.4532 3.39 147.6 34 85.0 7.9499 0.261 32.4686 3.36 146.2 33 86.0 7.9275 0.252 32.5005 3.32 144.6 31 87.0 7.8956 0.259 32.5447 3.30 143.5 31 88.0 7.8759 0.234 32.5716 3.28 142.7 30 89.0 7.8655 0.245 32.5871 3.26 141.9 29 90.0 7.8612 0.225 32.5950 3.24 141.2 30 91.0 7.8557 0.229 32.6048 3.23 140.5 35 92.0 7.8443 0.227 32.6220 3.20 139.4 41 93.0 7.8339 0.218 32.6360 3.18 138.6 31 94.0 7.8247 0.212 32.6471 3.17 138.1 28 95.0 7.8214 0.228 32.6513 3.16 137.6 29 96.0 7.8159 0.230 32.6582 3.16 137.7 30 97.0 7.8113 0.223 32.6639 3.18 138.4 32 98.0 7.7885 0.221 32.6793 3.19 138.9 32 99.0 7.7671 0.230 32.6942 3.17 138.0 32 100.0 7.7443 0.247 32.7238 3.15 137.0 30 101.0 7.7099 0.224 32.7807 3.13 136.4 33 102.0 7.7010 0.200 32.7931 3.12 135.8 32 103.0 7.6966 0.207 32.7997 3.10 135.0 33 104.0 7.6851 0.194 32.8134 3.08 134.0 31 105.0 7.6776 0.190 32.8197 3.04 132.5 29 106.0 7.6666 0.198 32.8285 3.01 131.2 29 107.0 7.6480 0.190 32.8462 3.00 130.5 31 108.0 7.6416 0.179 32.8512 2.99 130.3 36 109.0 7.6418 0.183 32.8511 2.96 128.6 37 110.0 7.6333 0.188 32.8586 2.90 126.4 34 111.0 7.6140 0.210 32.8745 2.86 124.4 28 112.0 7.5910 0.215 32.8953 2.83 123.1 29 113.0 7.5635 0.202 32.9195 2.81 122.4 28 114.0 7.5426 0.192 32.9387 2.80 121.7 32 115.0 7.5350 0.201 32.9455 2.79 121.2 31 116.0 7.5261 0.201 32.9532 2.78 120.8 30 117.0 7.5207 0.213 32.9578 2.77 120.5 40 118.0 7.5163 0.181 32.9627 2.77 120.7 40 119.0 7.5135 0.173 32.9677 2.78 121.1 40 120.0 7.5145 0.204 32.9698 2.79 121.5 36 121.0 7.5143 0.212 32.9703 2.79 121.3 35 122.0 7.5144 0.208 32.9705 2.79 121.3 38 123.0 7.5141 0.197 32.9707 2.78 121.1 49 124.0 7.5137 0.203 32.9709 2.78 121.1 48 124.9 7.5133 0.196 32.9713 2.78 121.1 37