*2013/12/16 15:38:55.19 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/16 19:30:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 119 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7BED2167 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 6.203 124.889 2 Temperature:Secondary 'deg C (ITS90)' 8.2846 8.7187 3 Fluorescence:URU:Wetlabs mg/m^3 0.314 0.605 4 Salinity:T1:C1 PSS-78 31.913 32.4214 5 Oxygen:Dissolved:SBE mL/L 3.896 4.575 6 Oxygen:Dissolved:SBE umol/kg 169.652 199.3083 7 Number_of_bin_records n/a 18 55 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : QCST 04 EVENT NUMBER : 112 LATITUDE : 50 57.29000 N ! (deg min) LONGITUDE : 127 32.52000 W ! (deg min) WATER DEPTH : 135 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:34:52 8803 8803 CLEAN 5.1 2013/03/30 16:42:25 8803 8803 SHIFTDAT 3.4 2013/04/02 09:22:52 8803 8803 SHIFTDAT 3.4 2013/04/02 11:04:28 8803 8803 SHIFTDAT 3.4 2013/04/02 11:10:39 8803 8803 SHIFTDAT 3.4 2013/04/02 13:34:48 8803 8803 DELETE 6.3 2013/04/02 13:46:10 8803 4009 CTDEDIT 4.61 2013/04/10 15:27:32 4009 3460 CALIB 11.7 2013/04/12 14:14:01 3460 3460 FILTERS 4.3 2013/04/12 14:25:09 3460 3460 BINAVE 4.1.1 2013/04/12 14:27:34 3460 119 REMOVECH 8.1.1 2013/04/12 14:56:37 119 119 CHGUNITS 3.0 2013/04/12 14:57:08 119 119 REORDER 1.3 2013/04/12 15:11:08 ? ? HDREDIT2 2.6 2013/04/12 15:13:41 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:55 119 119 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 115.44 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/10 15:27:32 549 records were deleted in this editing session. 132 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:14:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:37 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:41 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.112.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 16 2012 12:30:08 NMEA Latitude = 50 57.29 N NMEA Longitude = 127 32.52 W NMEA UTC (Time) = Oct 16 2012 19:30:46 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: QCST 04 Depth(m): 135 System UTC = Oct 16 2012 11:30:08 # nquan = 15 # nvalues = 8803 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8803 # span 1 = 2.814, 125.441 # span 2 = 8.2814, 8.7270 # span 3 = 8.2802, 8.7270 # span 4 = 3.391210, 3.421243 # span 5 = 3.391379, 3.421387 # span 6 = 1.6483, 1.8902 # span 7 = 0.2227, 2.5878 # span 8 = 7.911, 7.963 # span 9 = -1.802, 1.563 # span 10 = 0, 1 # span 11 = 31.9064, 32.4228 # span 12 = 31.9073, 32.4249 # span 13 = 3.83889, 4.56062 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 16 2012 19:30:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:05:25, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0112.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:58, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-011 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:33, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-01 12.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:16, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0112.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:52, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0112.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* The descent rate was noisy with some complete reversals of direction. CTDEDIT was used to remove surface records and some records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 6.2 8.6902 0.351 31.9130 4.58 199.3 19 7.0 8.6885 0.314 31.9137 4.56 198.7 18 8.0 8.6700 0.423 31.9565 4.54 197.7 20 9.0 8.6566 0.494 32.0153 4.53 197.2 18 10.0 8.6503 0.541 32.0366 4.52 197.0 23 11.0 8.6438 0.549 32.0592 4.51 196.6 45 12.1 8.6354 0.563 32.0830 4.50 196.2 32 13.0 8.6343 0.523 32.0832 4.51 196.3 37 14.0 8.6339 0.542 32.0837 4.50 196.0 39 15.0 8.6340 0.557 32.0846 4.49 195.8 34 16.0 8.6343 0.564 32.0855 4.49 195.7 25 17.0 8.6347 0.561 32.0861 4.50 196.0 24 18.0 8.6353 0.562 32.0875 4.51 196.4 25 18.9 8.6402 0.579 32.0918 4.52 196.8 32 20.1 8.6498 0.537 32.0963 4.51 196.4 29 21.0 8.6507 0.553 32.0975 4.52 196.9 29 22.0 8.6555 0.518 32.0996 4.52 196.8 27 23.0 8.6570 0.540 32.0998 4.52 196.8 30 24.0 8.6537 0.574 32.0983 4.52 197.1 28 25.0 8.6530 0.561 32.0988 4.53 197.4 28 26.0 8.6673 0.533 32.1063 4.54 197.5 31 27.0 8.6695 0.552 32.1066 4.53 197.1 50 28.0 8.6639 0.560 32.1039 4.52 196.8 34 29.0 8.6655 0.543 32.1051 4.52 196.7 38 29.9 8.6610 0.553 32.1024 4.53 197.2 52 31.0 8.6662 0.544 32.1059 4.55 198.1 25 32.0 8.6739 0.549 32.1079 4.55 198.1 21 33.0 8.6747 0.536 32.1076 4.54 197.8 31 34.0 8.6754 0.543 32.1078 4.54 197.8 44 35.0 8.6742 0.522 32.1074 4.54 198.0 25 36.0 8.6762 0.548 32.1078 4.55 198.0 29 37.2 8.6861 0.538 32.1131 4.56 198.5 18 38.0 8.7026 0.502 32.1202 4.56 198.7 26 39.0 8.7036 0.529 32.1208 4.56 198.8 23 40.0 8.7089 0.519 32.1235 4.56 198.7 29 41.0 8.7085 0.552 32.1235 4.56 198.7 28 42.0 8.7141 0.521 32.1244 4.56 198.8 23 43.0 8.7133 0.605 32.1243 4.56 198.8 36 44.0 8.7126 0.514 32.1246 4.55 198.4 30 45.0 8.7081 0.528 32.1225 4.56 198.5 18 46.0 8.7109 0.498 32.1260 4.57 198.8 21 46.9 8.7124 0.514 32.1265 4.56 198.8 23 48.0 8.7117 0.525 32.1244 4.55 198.4 27 49.0 8.7144 0.495 32.1294 4.55 198.3 18 50.0 8.7168 0.518 32.1408 4.56 198.5 20 51.0 8.7187 0.553 32.1426 4.55 198.4 25 52.0 8.7177 0.536 32.1338 4.56 198.6 35 53.0 8.7171 0.546 32.1399 4.56 198.6 37 54.0 8.7154 0.531 32.1375 4.56 198.8 39 55.0 8.7151 0.520 32.1375 4.56 198.6 43 56.1 8.7127 0.505 32.1320 4.55 198.3 26 57.0 8.7125 0.553 32.1326 4.55 198.3 27 58.0 8.7116 0.601 32.1307 4.55 198.2 21 59.0 8.7096 0.517 32.1277 4.54 197.8 22 60.0 8.7094 0.523 32.1376 4.52 197.0 26 61.0 8.7116 0.498 32.1653 4.49 195.7 37 62.0 8.6853 0.503 32.1878 4.46 194.2 53 62.9 8.6587 0.492 32.2151 4.43 193.1 45 64.0 8.6598 0.477 32.2193 4.43 192.9 25 65.0 8.6566 0.462 32.2213 4.43 193.0 23 66.0 8.6535 0.453 32.2227 4.43 193.1 23 67.0 8.6505 0.458 32.2217 4.42 192.6 23 68.0 8.6475 0.495 32.2210 4.42 192.6 23 69.1 8.6407 0.509 32.2237 4.42 192.5 40 70.0 8.6390 0.525 32.2243 4.41 192.1 45 71.0 8.6402 0.475 32.2234 4.39 191.2 41 72.0 8.6289 0.504 32.2305 4.37 190.2 40 73.0 8.6159 0.498 32.2385 4.34 188.9 25 74.0 8.5991 0.450 32.2475 4.31 187.8 18 75.0 8.5899 0.463 32.2512 4.29 186.8 21 76.0 8.5809 0.449 32.2547 4.27 186.1 25 77.0 8.5484 0.463 32.2662 4.26 185.7 30 78.0 8.5378 0.444 32.2703 4.26 185.5 33 79.1 8.5294 0.465 32.2721 4.26 185.6 55 79.9 8.5293 0.438 32.2724 4.24 184.7 47 81.0 8.5309 0.485 32.2722 4.22 183.7 22 82.0 8.5157 0.507 32.2772 4.21 183.6 18 83.0 8.4972 0.452 32.2862 4.21 183.3 21 84.0 8.4967 0.456 32.2865 4.20 183.0 30 85.0 8.4976 0.451 32.2868 4.19 182.5 35 86.0 8.4903 0.436 32.2904 4.18 182.0 30 87.0 8.4881 0.455 32.2913 4.17 181.8 30 88.0 8.4778 0.445 32.2959 4.17 181.6 32 89.2 8.4707 0.425 32.2989 4.17 181.5 24 90.0 8.4718 0.420 32.2991 4.16 181.3 30 91.0 8.4685 0.449 32.3006 4.15 180.9 28 92.0 8.4629 0.437 32.3027 4.15 180.7 28 93.0 8.4586 0.419 32.3043 4.15 180.6 26 94.0 8.4567 0.415 32.3024 4.14 180.3 23 95.0 8.4569 0.426 32.3034 4.13 180.0 24 96.0 8.4521 0.450 32.3034 4.14 180.1 38 97.2 8.4462 0.411 32.3067 4.12 179.3 23 98.0 8.4355 0.433 32.3129 4.12 179.3 25 99.0 8.4387 0.466 32.3108 4.12 179.2 21 100.0 8.4355 0.424 32.3136 4.11 179.0 20 101.0 8.4337 0.425 32.3158 4.11 178.9 21 102.1 8.4333 0.450 32.3158 4.11 178.9 36 103.2 8.4334 0.476 32.3150 4.10 178.6 19 104.0 8.4332 0.429 32.3153 4.10 178.4 19 105.0 8.4295 0.452 32.3187 4.09 178.2 18 106.0 8.4276 0.460 32.3216 4.09 178.2 28 107.1 8.4204 0.443 32.3260 4.06 176.6 18 108.0 8.4062 0.431 32.3348 4.01 174.5 26 109.0 8.4011 0.402 32.3384 3.97 172.8 22 110.0 8.3611 0.435 32.3639 3.95 172.0 21 111.0 8.3380 0.391 32.3826 3.95 172.0 22 112.0 8.3218 0.413 32.3950 3.95 172.2 26 113.0 8.3143 0.385 32.3995 3.96 172.3 33 115.0 8.3310 0.403 32.3903 3.97 172.7 22 116.0 8.3366 0.383 32.3877 3.96 172.4 19 117.0 8.3390 0.420 32.3859 3.96 172.3 22 117.8 8.3309 0.384 32.3904 3.96 172.7 21 119.1 8.3326 0.433 32.3907 3.93 171.3 32 119.9 8.3201 0.422 32.3991 3.92 170.6 38 121.0 8.2983 0.424 32.4130 3.90 170.0 46 122.0 8.3039 0.403 32.4090 3.90 169.8 48 123.0 8.2953 0.440 32.4144 3.90 169.7 31 124.1 8.2938 0.396 32.4151 3.90 169.7 35 124.9 8.2846 0.411 32.4214 3.90 169.7 32