*2013/12/16 15:38:54.97 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/15 16:16:15.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 88 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 748B9E52 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.285 90.985 2 Temperature:Secondary 'deg C (ITS90)' 7.3435 10.2907 3 Fluorescence:URU:Wetlabs mg/m^3 0.34E-01 1.45 4 Salinity:T1:C1 PSS-78 32.0146 33.493 5 Oxygen:Dissolved:SBE mL/L 3.56 5.787 6 Oxygen:Dissolved:SBE umol/kg 154.8735 252.1519 7 Number_of_bin_records n/a 8 46 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : T 07 EVENT NUMBER : 100 LATITUDE : 50 49.31000 N ! (deg min) LONGITUDE : 129 13.59000 W ! (deg min) WATER DEPTH : 105 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:34:34 8160 8160 CLEAN 5.1 2013/03/30 16:42:05 8160 8160 SHIFTDAT 3.4 2013/04/02 09:22:35 8160 8160 SHIFTDAT 3.4 2013/04/02 11:04:11 8160 8160 SHIFTDAT 3.4 2013/04/02 11:10:23 8160 8160 SHIFTDAT 3.4 2013/04/02 13:34:31 8160 8160 DELETE 6.3 2013/04/02 13:45:56 8160 2159 CTDEDIT 4.61 2013/04/09 17:04:16 2159 1965 CALIB 11.7 2013/04/12 14:13:53 1965 1965 FILTERS 4.3 2013/04/12 14:25:02 1965 1965 BINAVE 4.1.1 2013/04/12 14:27:29 1965 88 REMOVECH 8.1.1 2013/04/12 14:56:37 88 88 CHGUNITS 3.0 2013/04/12 14:57:08 88 88 REORDER 1.3 2013/04/12 15:11:08 ? ? HDREDIT2 2.6 2013/04/12 15:13:40 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:54 88 88 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 81.73 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/09 17:04:16 194 records were deleted in this editing session. 15 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:53 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:37 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:40 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.100.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 15 2012 09:16:26 NMEA Latitude = 50 49.31 N NMEA Longitude = 129 13.59 W NMEA UTC (Time) = Oct 15 2012 16:16:15 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: T 07 Depth(m): 105 System UTC = Oct 15 2012 08:16:26 # nquan = 15 # nvalues = 8160 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8160 # span 1 = 1.888, 91.733 # span 2 = 7.3422, 10.2934 # span 3 = 7.3420, 10.2926 # span 4 = 3.407642, 3.541516 # span 5 = 3.407755, 3.541614 # span 6 = 1.5384, 2.3200 # span 7 = -0.0630, 1.6989 # span 8 = 7.904, 8.130 # span 9 = -2.088, 2.355 # span 10 = 0, 1 # span 11 = 32.0087, 33.4923 # span 12 = 31.9871, 33.4940 # span 13 = 3.50151, 5.75636 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 15 2012 16:16:15 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:05:15, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0100.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:47, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-010 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:27, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-01 00.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:12, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0100.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:45, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0100.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* The descent rate of the CTD was extremely noisy with many complete reversals of direction. CTDEDIT was used to remove surface records and records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.3 10.2907 1.352 32.0146 5.79 252.2 10 5.0 10.2892 1.335 32.0151 5.79 252.2 22 6.0 10.2882 1.420 32.0154 5.79 252.1 26 7.1 10.2869 1.435 32.0169 5.72 249.2 25 7.9 10.2858 1.450 32.0172 5.59 243.6 26 9.0 10.2860 1.416 32.0176 5.53 240.9 14 10.0 10.2789 1.436 32.0170 5.50 239.6 10 11.0 10.1583 1.340 32.0435 5.49 239.1 13 12.1 9.8524 1.135 32.1603 5.51 240.0 16 13.0 9.7771 1.035 32.1966 5.47 238.2 37 13.9 9.7118 0.966 32.2368 5.42 236.2 34 15.0 9.7011 0.983 32.2436 5.38 234.5 28 16.0 9.6766 0.942 32.2560 5.39 234.8 24 17.0 9.6684 0.909 32.2605 5.38 234.1 39 17.9 9.6608 0.876 32.2645 5.26 229.0 28 19.0 9.6454 0.851 32.2696 5.21 226.8 12 20.0 9.5798 0.798 32.2931 5.19 226.1 18 21.1 9.5261 0.773 32.3125 5.19 226.1 23 21.9 9.4657 0.735 32.3321 5.02 218.8 41 23.0 9.2963 0.621 32.3889 4.87 212.3 26 24.1 9.2056 0.587 32.4220 4.86 211.4 33 24.9 9.1630 0.562 32.4401 4.79 208.7 36 26.0 9.1172 0.525 32.4611 4.67 203.4 23 27.0 9.1012 0.504 32.4705 4.60 200.4 15 28.0 9.0756 0.463 32.4842 4.56 198.7 14 29.0 9.0172 0.467 32.5111 4.54 197.7 14 30.0 8.9429 0.433 32.5479 4.54 197.7 17 31.0 8.8541 0.397 32.5893 4.54 197.9 31 32.0 8.5854 0.270 32.6900 4.14 180.4 12 33.0 8.3783 0.195 32.7766 4.14 180.3 11 34.0 8.3051 0.214 32.7995 4.14 180.1 12 35.0 8.2905 0.218 32.8071 4.13 180.0 13 36.0 8.2761 0.189 32.8137 4.13 179.9 14 37.0 8.2462 0.202 32.8254 4.13 180.0 21 37.9 8.1589 0.171 32.8617 4.07 177.1 23 39.0 7.9813 0.106 32.9323 3.86 167.9 13 40.0 7.8154 0.082 33.0031 3.87 168.3 13 41.0 7.6863 0.073 33.0778 3.88 169.1 13 42.0 7.6552 0.101 33.1454 3.90 169.6 15 43.0 7.5001 0.100 33.2658 3.92 170.4 18 44.1 7.4190 0.058 33.2831 3.92 170.7 36 44.9 7.3905 0.064 33.2864 3.93 171.0 33 46.0 7.3678 0.052 33.2956 3.92 170.8 25 47.1 7.3573 0.036 33.3097 3.91 170.0 32 48.0 7.3508 0.064 33.3257 3.83 166.7 39 48.9 7.3449 0.040 33.3653 3.75 163.1 28 50.0 7.3476 0.038 33.4252 3.71 161.5 20 51.0 7.3461 0.047 33.4370 3.70 161.1 15 52.0 7.3439 0.039 33.4511 3.70 160.8 22 53.0 7.3440 0.035 33.4516 3.69 160.7 32 54.2 7.3435 0.034 33.4628 3.63 158.1 19 55.0 7.3436 0.042 33.4650 3.62 157.7 23 56.0 7.3440 0.043 33.4688 3.62 157.3 21 57.1 7.3454 0.049 33.4766 3.61 156.9 27 58.0 7.3461 0.049 33.4788 3.60 156.7 43 59.0 7.3462 0.053 33.4800 3.60 156.7 28 60.0 7.3463 0.055 33.4808 3.60 156.7 24 61.0 7.3464 0.063 33.4803 3.60 156.8 31 62.0 7.3465 0.061 33.4802 3.61 157.0 33 63.0 7.3461 0.066 33.4752 3.61 157.0 28 64.1 7.3462 0.059 33.4741 3.61 157.0 39 65.0 7.3469 0.045 33.4764 3.59 156.4 22 66.0 7.3477 0.051 33.4795 3.59 156.2 20 67.0 7.3481 0.068 33.4808 3.59 156.1 21 68.0 7.3490 0.066 33.4843 3.59 156.0 20 69.0 7.3481 0.048 33.4804 3.59 156.0 18 70.0 7.3483 0.064 33.4814 3.59 156.0 16 71.0 7.3485 0.080 33.4817 3.59 156.2 16 72.0 7.3491 0.047 33.4836 3.59 156.0 23 73.1 7.3487 0.048 33.4809 3.59 156.0 10 74.0 7.3484 0.075 33.4786 3.58 155.7 12 75.0 7.3488 0.064 33.4815 3.58 155.7 13 76.0 7.3496 0.064 33.4834 3.58 155.7 17 77.1 7.3498 0.045 33.4840 3.57 155.4 43 78.0 7.3514 0.073 33.4890 3.57 155.1 36 78.8 7.3536 0.057 33.4926 3.56 154.9 25 80.0 7.3536 0.063 33.4926 3.56 154.9 46 81.2 7.3547 0.064 33.4916 3.56 154.9 8 82.0 7.3544 0.064 33.4923 3.56 155.0 12 83.0 7.3561 0.074 33.4881 3.56 155.0 10 84.0 7.3556 0.049 33.4905 3.57 155.1 11 85.0 7.3550 0.048 33.4918 3.57 155.3 12 86.0 7.3546 0.074 33.4930 3.57 155.4 14 87.1 7.3569 0.047 33.4866 3.57 155.5 22 88.0 7.3571 0.064 33.4871 3.56 155.1 9 89.0 7.3570 0.064 33.4872 3.56 154.9 13 90.0 7.3571 0.065 33.4872 3.56 154.9 18 91.0 7.3552 0.071 33.4927 3.56 155.1 34