*2013/12/16 15:38:54.81 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/14 22:02:44.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 67 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 2D5331A7 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 7.088 72.885 2 Temperature:Secondary 'deg C (ITS90)' 8.744 10.9587 3 Fluorescence:URU:Wetlabs mg/m^3 0.292 1.144 4 Salinity:T1:C1 PSS-78 31.5743 32.5592 5 Oxygen:Dissolved:SBE mL/L 4.532 5.761 6 Oxygen:Dissolved:SBE umol/kg 197.3702 251.1236 7 Number_of_bin_records n/a 11 47 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : VI 16 EVENT NUMBER : 91 LATITUDE : 50 21.56000 N ! (deg min) LONGITUDE : 128 5.65000 W ! (deg min) WATER DEPTH : 81 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:34:23 6252 6252 CLEAN 5.1 2013/03/30 16:41:52 6252 6252 SHIFTDAT 3.4 2013/04/02 09:22:24 6252 6252 SHIFTDAT 3.4 2013/04/02 11:04:00 6252 6252 SHIFTDAT 3.4 2013/04/02 11:10:12 6252 6252 SHIFTDAT 3.4 2013/04/02 13:34:19 6252 6252 DELETE 6.3 2013/04/02 13:45:47 6252 1569 CTDEDIT 4.61 2013/04/09 16:30:56 1569 1460 CALIB 11.7 2013/04/12 14:13:49 1460 1460 FILTERS 4.3 2013/04/12 14:24:59 1460 1460 BINAVE 4.1.1 2013/04/12 14:27:27 1460 67 REMOVECH 8.1.1 2013/04/12 14:56:37 67 67 CHGUNITS 3.0 2013/04/12 14:57:07 67 67 REORDER 1.3 2013/04/12 15:11:07 ? ? HDREDIT2 2.6 2013/04/12 15:13:40 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:54 67 67 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 63.28 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/09 16:30:56 109 records were deleted in this editing session. 97 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:37 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:40 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.091.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 14 2012 15:02:26 NMEA Latitude = 50 21.56 N NMEA Longitude = 128 05.65 W NMEA UTC (Time) = Oct 14 2012 22:02:44 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: VI 16 Depth(m): 81 System UTC = Oct 14 2012 14:02:26 # nquan = 15 # nvalues = 6252 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6252 # span 1 = 2.878, 73.284 # span 2 = 8.7371, 10.9608 # span 3 = 8.7352, 10.9613 # span 4 = 3.461088, 3.557996 # span 5 = 3.461081, 3.558166 # span 6 = 1.8753, 2.3175 # span 7 = 0.1751, 4.3497 # span 8 = 8.005, 8.146 # span 9 = -3.427, 2.541 # span 10 = 0, 1 # span 11 = 31.5672, 32.5641 # span 12 = 31.5714, 32.5649 # span 13 = 4.48110, 5.71572 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 14 2012 22:02:44 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:05:10, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0091.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:40, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-009 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:22, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 91.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:45:08, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0091.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:40, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0091.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and some records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 7.1 10.9531 0.964 31.5747 5.70 248.5 30 8.0 10.9563 0.902 31.5748 5.70 248.5 23 9.0 10.9519 1.015 31.5743 5.70 248.5 25 10.2 10.9552 1.000 31.5748 5.71 248.9 19 11.0 10.9580 0.933 31.5746 5.71 249.0 40 11.9 10.9586 1.013 31.5747 5.70 248.5 32 13.0 10.9587 0.976 31.5749 5.70 248.4 22 14.0 10.9577 1.062 31.5748 5.70 248.5 21 15.0 10.9559 0.952 31.5748 5.71 248.7 32 15.9 10.9563 1.144 31.5747 5.71 248.7 38 17.0 10.9566 1.063 31.5748 5.71 248.7 23 18.0 10.9572 1.073 31.5747 5.70 248.5 24 19.0 10.9564 1.005 31.5748 5.70 248.3 32 20.0 10.9478 0.934 31.5746 5.70 248.4 29 21.0 10.9434 1.063 31.5748 5.70 248.5 25 22.0 10.9425 1.021 31.5750 5.70 248.3 29 23.0 10.9380 1.011 31.5752 5.70 248.6 39 24.0 10.9415 0.959 31.5747 5.69 248.2 47 25.0 10.9388 1.064 31.5753 5.69 248.1 29 26.0 10.9201 0.843 31.5793 5.69 248.1 14 27.0 10.9119 0.828 31.5813 5.70 248.4 21 28.0 10.9058 0.849 31.5821 5.70 248.6 25 29.0 10.9052 0.822 31.5825 5.70 248.6 29 30.0 10.9053 0.859 31.5827 5.70 248.6 26 31.0 10.9051 0.893 31.5829 5.71 248.7 27 31.9 10.9026 0.786 31.5840 5.71 248.9 26 32.9 10.9052 0.814 31.5833 5.71 249.0 19 34.0 10.8973 0.797 31.5865 5.72 249.3 12 35.0 10.8889 0.839 31.5914 5.72 249.5 12 36.0 10.8890 0.818 31.5944 5.72 249.6 15 37.0 10.8981 0.762 31.5979 5.72 249.2 18 38.1 10.9033 0.784 31.6005 5.76 251.1 18 39.0 10.9042 0.844 31.6009 5.76 251.1 19 40.0 10.9083 0.825 31.6047 5.76 250.9 16 41.0 10.9121 0.879 31.6075 5.75 250.8 14 42.0 10.9139 0.882 31.6077 5.75 250.5 14 43.0 10.9145 0.854 31.6073 5.74 250.3 15 44.0 10.9137 0.818 31.6078 5.74 250.1 16 45.1 10.9099 0.764 31.6109 5.74 250.0 22 46.0 10.8805 0.780 31.6345 5.66 246.6 35 47.0 10.8051 0.800 31.6796 5.45 237.5 24 48.0 10.6996 0.794 31.7409 5.36 233.5 21 49.0 10.5580 0.770 31.8209 5.32 231.7 21 50.0 10.4330 0.812 31.8823 5.31 231.5 25 50.8 10.2699 0.693 31.9631 5.32 231.7 15 52.0 10.2546 0.620 31.9700 5.19 226.0 17 53.0 10.2487 0.751 31.9723 5.17 225.2 12 54.0 10.2270 0.712 31.9805 5.17 225.2 11 55.1 10.1790 0.666 31.9982 5.17 225.3 11 56.0 10.0926 0.557 32.0263 5.18 225.7 12 57.1 10.0269 0.624 32.0455 5.18 225.8 20 58.0 10.0103 0.643 32.0525 5.15 224.2 29 59.0 10.0049 0.601 32.0573 5.05 220.0 31 60.0 9.9919 0.606 32.0824 4.99 217.3 21 61.0 9.9306 0.628 32.1142 4.96 216.0 15 62.0 9.8288 0.554 32.1485 4.95 215.7 14 63.0 9.7842 0.525 32.1688 4.95 215.7 13 64.0 9.6491 0.495 32.2263 4.96 216.3 17 65.0 9.5684 0.531 32.2654 4.85 211.3 25 66.0 9.4064 0.486 32.3386 4.55 198.2 15 67.0 9.2975 0.430 32.3907 4.53 197.5 11 68.0 9.1868 0.397 32.4410 4.53 197.4 11 69.0 9.0600 0.369 32.4727 4.54 197.5 11 70.0 8.9044 0.330 32.5130 4.55 198.0 12 71.0 8.7881 0.315 32.5422 4.56 198.4 15 72.0 8.7556 0.316 32.5548 4.56 198.4 20 72.9 8.7440 0.292 32.5592 4.57 198.9 27