*2013/12/16 15:38:54.11 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/12 16:41:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 102 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6B68EEA5 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.264 104.574 2 Temperature:Secondary 'deg C (ITS90)' 7.3713 9.7346 3 Fluorescence:URU:Wetlabs mg/m^3 0.45E-01 2.477 4 Salinity:T1:C1 PSS-78 31.8511 33.5091 5 Oxygen:Dissolved:SBE mL/L 2.936 5.144 6 Oxygen:Dissolved:SBE umol/kg 127.7963 224.1429 7 Number_of_bin_records n/a 2 53 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : EP 03 EVENT NUMBER : 40 LATITUDE : 49 16.84000 N ! (deg min) LONGITUDE : 126 40.43000 W ! (deg min) WATER DEPTH : 112 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:33:33 8535 8535 CLEAN 5.1 2013/03/30 16:40:57 8535 8535 SHIFTDAT 3.4 2013/04/02 09:21:39 8535 8535 SHIFTDAT 3.4 2013/04/02 11:03:15 8535 8535 SHIFTDAT 3.4 2013/04/02 11:09:28 8535 8535 SHIFTDAT 3.4 2013/04/02 13:33:31 8535 8535 DELETE 6.3 2013/04/02 13:45:10 8535 2946 CTDEDIT 4.61 2013/04/08 17:02:12 2946 2722 CALIB 11.7 2013/04/12 14:13:27 2722 2722 FILTERS 4.3 2013/04/12 14:24:40 2722 2722 BINAVE 4.1.1 2013/04/12 14:27:14 2722 102 REMOVECH 8.1.1 2013/04/12 14:56:36 102 102 CHGUNITS 3.0 2013/04/12 14:57:07 102 102 REORDER 1.3 2013/04/12 15:11:06 ? ? HDREDIT2 2.6 2013/04/12 15:13:39 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:54 102 102 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 94.99 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/08 17:02:12 224 records were deleted in this editing session. 8 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:27 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:36 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:39 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.040.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 12 2012 09:41:42 NMEA Latitude = 49 16.84 N NMEA Longitude = 126 40.43 W NMEA UTC (Time) = Oct 12 2012 16:41:02 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: EP 03 Depth(m): 112 System UTC = Oct 12 2012 08:41:42 # nquan = 15 # nvalues = 8535 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8535 # span 1 = 2.665, 104.992 # span 2 = 7.3703, 9.7470 # span 3 = 7.3703, 9.7470 # span 4 = 3.391064, 3.477578 # span 5 = 3.391042, 3.477639 # span 6 = 1.3674, 2.1002 # span 7 = -0.0630, 9.3020 # span 8 = 7.780, 8.007 # span 9 = -2.633, 1.989 # span 10 = 0, 1 # span 11 = 31.8444, 33.5138 # span 12 = 31.8460, 33.5148 # span 13 = 2.88233, 5.12729 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 12 2012 16:41:02 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:04:36, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0040.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:15, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-004 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:03, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 40.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:44:47, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0040.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:17, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0040.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.3 9.7342 1.064 31.8516 5.14 224.1 2 4.7 9.7346 2.139 31.8511 5.14 224.1 11 6.0 9.7345 1.694 31.8515 5.14 224.1 32 7.0 9.7318 1.972 31.8531 5.13 223.5 29 7.9 9.7299 1.862 31.8539 5.12 223.1 34 8.9 9.7231 1.915 31.8566 5.13 223.5 19 10.0 9.7248 2.141 31.8559 5.12 223.3 28 11.0 9.7267 1.854 31.8548 5.10 222.4 23 12.1 9.7203 1.731 31.8566 5.10 222.3 28 13.1 9.7101 1.989 31.8614 5.06 220.6 20 14.0 9.6983 2.213 31.8662 5.04 219.6 30 15.1 9.6909 2.373 31.8699 5.03 219.0 41 16.0 9.6857 2.000 31.8712 4.95 215.5 44 17.0 9.6594 1.934 31.8812 4.79 208.5 31 18.0 9.6485 1.893 31.8859 4.66 203.1 24 19.0 9.5490 1.713 31.9495 4.63 201.7 23 19.7 9.4657 2.477 32.0184 4.63 201.6 7 21.0 9.4423 1.803 32.0550 4.50 196.0 26 22.0 9.3919 1.845 32.0647 4.45 193.8 21 23.0 9.3868 1.448 32.0834 4.40 191.8 22 23.9 9.2923 1.798 32.0910 4.34 189.2 26 24.9 9.2084 1.903 32.1153 3.86 168.3 36 26.0 9.1686 1.467 32.1124 3.81 165.8 24 27.0 9.1591 0.719 32.1171 3.79 165.1 26 28.0 9.1529 0.525 32.1197 3.76 163.8 34 29.0 9.1340 0.717 32.1322 3.69 160.9 26 30.0 9.1025 0.776 32.1498 3.68 160.2 28 31.0 9.0939 0.662 32.1555 3.64 158.5 46 32.0 9.0812 0.713 32.1663 3.59 156.6 26 33.0 9.0453 0.764 32.1910 3.57 155.5 27 34.0 9.0178 0.637 32.2065 3.53 153.7 40 35.0 8.9842 0.572 32.2339 3.48 151.4 34 36.0 8.9695 0.628 32.2498 3.44 149.8 29 37.0 8.9373 0.524 32.2753 3.42 149.0 31 38.1 8.9104 0.520 32.2931 3.42 148.9 44 38.9 8.8641 0.500 32.3279 3.37 146.7 53 40.0 8.8391 0.523 32.3460 3.26 141.9 30 41.0 8.7870 0.497 32.3779 3.20 139.5 29 42.0 8.7333 0.451 32.4236 3.17 137.9 30 43.0 8.6995 0.410 32.4520 3.16 137.7 40 44.0 8.6861 0.410 32.4674 3.16 137.5 44 45.0 8.6728 0.404 32.4829 3.13 136.5 33 46.0 8.6602 0.418 32.4932 3.11 135.3 28 47.0 8.6528 0.444 32.5070 3.06 133.4 24 48.0 8.6276 0.418 32.5223 3.04 132.5 20 49.0 8.6055 0.389 32.5409 3.04 132.2 23 50.0 8.5961 0.389 32.5486 3.02 131.6 34 51.0 8.5834 0.306 32.5614 2.98 129.8 16 52.0 8.5663 0.401 32.5761 2.98 129.7 13 53.0 8.5563 0.385 32.5843 2.98 129.8 14 54.1 8.5315 0.361 32.6064 2.98 129.9 24 54.9 8.5105 0.318 32.6250 2.98 130.0 32 56.0 8.4857 0.347 32.6534 2.98 129.9 23 57.1 8.4347 0.428 32.7120 2.98 129.7 32 57.9 8.3987 0.415 32.7453 3.00 130.4 27 59.0 8.3751 0.390 32.7701 3.02 131.3 12 60.0 8.3423 0.410 32.8199 3.03 131.8 14 61.0 8.3409 0.394 32.8265 3.02 131.4 17 62.1 8.3192 0.387 32.8619 3.00 130.5 33 63.0 8.2414 0.346 32.9203 2.94 127.9 28 64.0 8.2089 0.369 32.9423 2.94 127.8 23 65.0 8.2025 0.337 32.9473 2.94 128.1 38 66.0 8.1958 0.352 32.9518 2.97 129.2 22 67.0 8.1790 0.302 32.9593 2.97 129.3 18 68.1 8.1571 0.364 32.9658 2.97 129.2 23 69.0 8.1520 0.333 32.9731 2.98 129.6 39 69.9 8.1332 0.307 32.9814 3.00 130.4 25 71.0 8.1181 0.328 32.9875 3.01 130.9 18 72.0 8.1026 0.291 33.0006 3.02 131.3 22 72.9 8.0600 0.252 33.0232 3.18 138.5 23 74.0 7.9961 0.247 33.0344 3.54 154.2 13 75.0 7.9105 0.226 33.0465 3.64 158.6 13 76.0 7.8563 0.229 33.0494 3.71 161.3 16 77.0 7.7694 0.223 33.0493 4.01 174.7 30 78.0 7.6633 0.190 33.0494 4.54 197.8 20 79.0 7.5607 0.160 33.0434 4.62 201.2 18 80.0 7.4690 0.196 33.0538 4.66 202.7 25 81.0 7.4567 0.158 33.0628 4.84 210.5 21 82.0 7.4400 0.145 33.0644 4.87 212.0 15 83.0 7.4236 0.112 33.0645 4.88 212.2 14 84.0 7.3878 0.104 33.0799 4.88 212.3 16 85.1 7.3721 0.092 33.1190 4.88 212.4 22 86.0 7.3713 0.090 33.1533 4.84 210.6 23 87.0 7.3724 0.073 33.1666 4.81 209.2 23 88.0 7.3744 0.076 33.1753 4.78 208.0 24 89.0 7.3785 0.052 33.1863 4.73 205.9 36 90.0 7.3842 0.057 33.2084 4.55 197.8 52 91.0 7.3976 0.058 33.2211 4.33 188.6 26 92.0 7.4164 0.055 33.2331 4.29 186.5 22 93.0 7.4295 0.070 33.2447 4.26 185.5 26 93.9 7.4270 0.062 33.2547 4.25 184.8 36 95.0 7.4207 0.058 33.2814 4.12 179.4 39 96.0 7.4305 0.057 33.3031 3.78 164.5 49 96.9 7.4494 0.057 33.3442 3.52 152.9 27 98.0 7.4520 0.061 33.3559 3.37 146.5 19 99.0 7.4538 0.064 33.3648 3.28 142.9 18 100.1 7.4548 0.065 33.3758 3.23 140.3 26 100.9 7.4348 0.070 33.4452 3.04 132.2 23 102.0 7.4170 0.062 33.4787 3.04 132.5 25 103.0 7.4053 0.045 33.4956 3.06 133.3 31 104.1 7.3995 0.052 33.5034 3.08 133.8 32 104.6 7.3948 0.048 33.5091 3.07 133.6 17