*2013/12/16 15:38:54.02 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/11 23:21:42.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 80 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : CEE62C29 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.374 81.552 2 Temperature:Secondary 'deg C (ITS90)' 7.9525 9.3847 3 Fluorescence:URU:Wetlabs mg/m^3 0.392 1.954 4 Salinity:T1:C1 PSS-78 32.0285 33.1017 5 Oxygen:Dissolved:SBE mL/L 2.638 4.472 6 Oxygen:Dissolved:SBE umol/kg 114.8079 194.8235 7 Number_of_bin_records n/a 8 90 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : VI 09 EVENT NUMBER : 31 LATITUDE : 49 9.50000 N ! (deg min) LONGITUDE : 126 23.34000 W ! (deg min) WATER DEPTH : 89 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:33:27 5148 5148 CLEAN 5.1 2013/03/30 16:40:51 5148 5148 SHIFTDAT 3.4 2013/04/02 09:21:34 5148 5148 SHIFTDAT 3.4 2013/04/02 11:03:10 5148 5148 SHIFTDAT 3.4 2013/04/02 11:09:23 5148 5148 SHIFTDAT 3.4 2013/04/02 13:33:25 5148 5148 DELETE 6.3 2013/04/02 13:45:05 5148 2397 CTDEDIT 4.61 2013/04/08 16:42:43 2397 2366 CALIB 11.7 2013/04/12 14:13:25 2366 2366 FILTERS 4.3 2013/04/12 14:24:38 2366 2366 BINAVE 4.1.1 2013/04/12 14:27:13 2366 80 REMOVECH 8.1.1 2013/04/12 14:56:36 80 80 CHGUNITS 3.0 2013/04/12 14:57:07 80 80 REORDER 1.3 2013/04/12 15:11:06 ? ? HDREDIT2 2.6 2013/04/12 15:13:39 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:54 80 80 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 71.88 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/08 16:42:43 31 records were deleted in this editing session. 16 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:25 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:36 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:39 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.031.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 11 2012 16:22:27 NMEA Latitude = 49 09.50 N NMEA Longitude = 126 23.34 W NMEA UTC (Time) = Oct 11 2012 23:21:42 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: VI 09 Depth(m): 89 System UTC = Oct 11 2012 15:22:27 # nquan = 15 # nvalues = 5148 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5148 # span 1 = 3.006, 81.876 # span 2 = 7.9485, 9.3986 # span 3 = 7.9496, 9.3969 # span 4 = 3.443046, 3.476471 # span 5 = 3.443155, 3.476498 # span 6 = 1.2734, 1.8730 # span 7 = 0.1909, 8.1909 # span 8 = 7.748, 7.912 # span 9 = -1.405, 1.507 # span 10 = 0, 1 # span 11 = 32.0220, 33.1033 # span 12 = 32.0236, 33.1035 # span 13 = 2.58637, 4.43232 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 11 2012 23:21:42 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:04:30, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0031.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:14, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-003 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:54:01, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 31.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:44:43, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0031.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:15, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0031.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.4 9.3559 1.804 32.0285 4.47 194.8 8 4.1 9.3555 1.916 32.0288 4.47 194.8 45 5.0 9.3557 1.864 32.0290 4.46 194.5 90 6.0 9.3564 1.923 32.0291 4.47 194.6 77 7.0 9.3559 1.829 32.0297 4.46 194.2 47 8.0 9.3562 1.954 32.0286 4.44 193.3 35 9.0 9.3528 1.707 32.0323 4.41 192.3 35 10.0 9.3497 1.729 32.0372 4.39 191.1 36 11.0 9.3470 1.715 32.0446 4.34 189.0 38 12.0 9.3417 1.600 32.0740 4.30 187.3 42 13.0 9.3420 1.648 32.0993 4.28 186.4 43 14.0 9.3668 1.612 32.1206 4.17 181.9 34 15.0 9.3847 1.563 32.1470 4.06 176.8 29 16.0 9.2737 1.694 32.1758 4.02 175.2 28 17.0 9.2145 1.606 32.1890 4.00 174.4 27 18.0 9.2107 1.478 32.2066 3.98 173.5 29 19.0 9.1880 1.438 32.2127 3.98 173.5 31 20.0 9.1750 1.689 32.2237 3.99 174.0 34 21.0 9.1762 1.369 32.2408 3.98 173.5 35 22.0 9.1867 1.401 32.2527 3.92 170.7 34 23.0 9.1700 1.337 32.2599 3.78 164.8 26 24.0 9.1016 1.287 32.2881 3.58 156.1 26 25.0 9.0275 1.403 32.3102 3.39 147.5 28 26.0 8.9131 1.079 32.3079 3.25 141.5 25 27.0 8.8345 0.886 32.3282 3.18 138.6 22 28.0 8.7592 0.770 32.3863 3.15 137.4 23 29.0 8.7222 0.687 32.4164 3.14 136.7 25 30.0 8.7014 0.635 32.4331 3.12 136.0 30 31.0 8.6926 0.715 32.4408 3.11 135.3 33 32.0 8.6763 0.665 32.4535 3.10 135.0 31 33.0 8.6712 0.699 32.4576 3.09 134.5 29 34.0 8.6702 0.732 32.4584 3.07 133.8 25 35.0 8.6693 0.703 32.4595 3.06 133.2 20 36.0 8.6382 0.727 32.4855 3.05 133.0 19 37.0 8.6228 0.677 32.4967 3.04 132.6 26 38.0 8.6151 0.634 32.5043 3.04 132.2 26 39.0 8.6030 0.550 32.5169 3.03 132.1 26 40.0 8.5887 0.641 32.5324 3.03 131.9 26 41.0 8.5779 0.596 32.5458 3.03 131.8 24 42.0 8.5689 0.588 32.5566 3.03 131.9 25 43.0 8.5557 0.625 32.5714 3.03 131.8 26 44.0 8.5497 0.605 32.5779 3.02 131.6 25 45.0 8.5457 0.623 32.5824 3.02 131.7 31 46.0 8.5395 0.613 32.5897 3.02 131.5 37 47.0 8.5350 0.675 32.5941 3.01 130.9 26 48.0 8.5315 0.582 32.5975 2.99 130.0 22 49.0 8.5245 0.693 32.6040 2.97 129.1 20 50.0 8.5123 0.505 32.6148 2.96 128.7 18 51.0 8.4927 0.599 32.6329 2.95 128.4 21 52.0 8.4852 0.559 32.6396 2.94 127.9 24 53.0 8.4763 0.523 32.6466 2.93 127.4 28 54.0 8.4692 0.512 32.6536 2.92 127.0 32 55.0 8.4470 0.513 32.6742 2.91 126.7 28 56.0 8.4348 0.518 32.6849 2.90 126.2 25 57.0 8.4198 0.522 32.6990 2.89 125.9 23 58.0 8.4052 0.471 32.7139 2.88 125.6 24 59.0 8.3921 0.478 32.7284 2.88 125.3 22 60.0 8.3798 0.493 32.7409 2.87 124.9 24 61.0 8.3651 0.522 32.7568 2.86 124.4 26 62.0 8.3458 0.479 32.7767 2.84 123.5 30 63.0 8.3131 0.414 32.8080 2.81 122.5 30 64.0 8.2801 0.476 32.8384 2.80 121.8 27 65.0 8.2161 0.440 32.9014 2.79 121.4 20 66.0 8.2053 0.434 32.9065 2.77 120.8 24 67.0 8.1935 0.392 32.9174 2.76 120.3 25 68.0 8.1591 0.458 32.9514 2.76 120.1 23 69.0 8.1444 0.485 32.9668 2.76 120.0 20 70.0 8.1413 0.532 32.9720 2.75 119.9 19 71.0 8.1348 0.596 32.9802 2.75 119.8 22 72.0 8.1199 0.589 32.9930 2.75 119.7 29 73.0 8.1142 0.550 32.9978 2.74 119.3 39 74.0 8.1065 0.646 33.0037 2.72 118.3 38 75.0 8.0949 0.606 33.0114 2.71 118.1 32 76.0 8.0791 0.675 33.0232 2.71 118.1 28 77.0 8.0593 0.550 33.0362 2.71 117.8 27 78.0 8.0531 0.593 33.0396 2.70 117.4 31 79.0 8.0456 0.619 33.0437 2.68 116.8 32 80.0 7.9939 0.636 33.0695 2.65 115.3 37 81.0 7.9633 0.701 33.0924 2.64 114.8 34 81.6 7.9525 0.584 33.1017 2.64 114.9 8