*2013/12/16 15:38:53.89 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/11 16:51:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 78 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 77A9CD19 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.286 79.916 2 Temperature:Secondary 'deg C (ITS90)' 7.6106 10.1396 3 Fluorescence:URU:Wetlabs mg/m^3 0.163 2.376 4 Salinity:T1:C1 PSS-78 31.6748 33.3698 5 Oxygen:Dissolved:SBE mL/L 2.371 5.313 6 Oxygen:Dissolved:SBE umol/kg 103.1609 231.4754 7 Number_of_bin_records n/a 22 99 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : VI 06 EVENT NUMBER : 22 LATITUDE : 48 59.61000 N ! (deg min) LONGITUDE : 126 12.01000 W ! (deg min) WATER DEPTH : 90 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:33:19 6599 6599 CLEAN 5.1 2013/03/30 16:40:42 6599 6599 SHIFTDAT 3.4 2013/04/02 09:21:26 6599 6599 SHIFTDAT 3.4 2013/04/02 11:03:02 6599 6599 SHIFTDAT 3.4 2013/04/02 11:09:14 6599 6599 SHIFTDAT 3.4 2013/04/02 13:33:17 6599 6599 DELETE 6.3 2013/04/02 13:44:58 6599 3044 CTDEDIT 4.61 2013/04/08 16:20:47 3044 3042 CALIB 11.7 2013/04/12 14:13:21 3042 3042 FILTERS 4.3 2013/04/12 14:24:34 3042 3042 BINAVE 4.1.1 2013/04/12 14:27:11 3042 78 REMOVECH 8.1.1 2013/04/12 14:56:36 78 78 CHGUNITS 3.0 2013/04/12 14:57:06 78 78 REORDER 1.3 2013/04/12 15:11:06 ? ? HDREDIT2 2.6 2013/04/12 15:13:39 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:53 78 78 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 70.34 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/08 16:20:47 2 records were deleted in this editing session. 20 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:36 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:39 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.022.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 11 2012 09:53:42 NMEA Latitude = 48 59.61 N NMEA Longitude = 126 12.01 W NMEA UTC (Time) = Oct 11 2012 16:51:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: VI 06 Depth(m): 90 System UTC = Oct 11 2012 08:53:42 # nquan = 15 # nvalues = 6599 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6599 # span 1 = 2.679, 80.341 # span 2 = 7.6098, 10.1764 # span 3 = 7.6095, 10.1743 # span 4 = 3.437738, 3.544526 # span 5 = 3.437857, 3.544530 # span 6 = 1.1854, 2.1222 # span 7 = 0.0322, 8.6671 # span 8 = 7.735, 8.035 # span 9 = -1.422, 1.242 # span 10 = 0, 1 # span 11 = 31.6713, 33.3691 # span 12 = 31.6738, 33.3708 # span 13 = 2.31631, 5.34642 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 11 2012 16:51:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:04:25, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0022.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:10, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-002 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:53:57, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 22.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:44:39, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0022.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:12, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0022.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove a few records; salinity was cleaned lightly. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 9.7028 1.520 31.6751 4.71 205.1 31 4.0 9.6991 1.449 31.6785 4.71 205.3 40 5.0 9.7013 1.541 31.6768 4.72 205.8 43 6.0 9.7042 1.446 31.6756 4.72 205.7 50 7.0 9.7048 1.592 31.6748 4.71 205.1 45 8.0 9.7026 1.617 31.6758 4.56 198.6 44 9.0 9.6691 1.666 31.6971 4.30 187.5 43 10.0 9.5479 1.618 31.7684 4.33 188.6 31 11.0 9.5271 2.022 31.7996 4.67 203.3 29 12.0 9.6308 2.196 31.8908 4.92 214.4 31 13.0 9.8781 1.913 31.9961 5.00 217.7 33 14.0 9.9288 2.191 32.0299 5.19 226.1 41 15.0 10.0618 1.791 32.0978 5.31 231.5 63 15.9 10.1396 1.794 32.1464 5.06 220.4 40 17.0 9.9624 1.501 32.1397 4.86 211.7 25 18.0 9.9617 1.944 32.1885 4.66 202.9 22 19.0 9.8364 1.728 32.2345 4.55 198.4 24 20.0 9.6238 1.658 32.2402 4.51 196.3 28 21.0 9.5317 1.344 32.2660 4.46 194.3 45 22.0 9.4667 1.303 32.2937 4.43 193.1 48 22.9 9.3854 1.741 32.3215 4.55 198.0 37 24.0 9.3307 1.745 32.3654 4.72 205.8 27 25.0 9.4176 1.798 32.4269 4.81 209.3 22 26.0 9.4438 2.044 32.4817 4.87 211.9 23 27.0 9.4113 2.135 32.5352 4.84 210.6 26 28.1 9.4174 2.367 32.6445 4.64 202.0 48 29.1 9.1038 2.376 32.6994 4.00 174.2 27 30.0 8.9270 1.894 32.7175 3.64 158.6 32 31.0 8.7427 1.714 32.7417 3.44 149.9 23 32.0 8.6262 1.641 32.7620 3.33 144.9 23 33.0 8.5121 1.317 32.7895 3.25 141.4 24 34.0 8.4401 1.001 32.8090 3.18 138.5 33 35.0 8.3644 0.899 32.8365 3.11 135.4 59 36.0 8.3208 0.937 32.8573 3.00 130.8 52 37.0 8.2872 0.814 32.8702 2.90 126.1 32 38.0 8.2302 0.734 32.8910 2.85 124.2 26 39.0 8.1995 0.577 32.9086 2.83 123.0 28 40.0 8.1559 0.418 32.9485 2.81 122.4 33 41.0 8.1118 0.388 32.9911 2.81 122.1 43 42.0 8.0948 0.340 33.0089 2.80 121.7 49 43.0 8.0822 0.343 33.0219 2.79 121.4 43 44.0 8.0742 0.393 33.0311 2.79 121.4 34 45.0 8.0644 0.361 33.0407 2.79 121.4 34 46.0 8.0537 0.370 33.0541 2.79 121.4 36 47.0 8.0305 0.335 33.0782 2.79 121.6 38 48.0 8.0178 0.336 33.0915 2.80 121.9 36 49.0 8.0040 0.360 33.1075 2.79 121.3 32 50.0 7.9686 0.364 33.1381 2.76 119.9 36 51.0 7.9301 0.345 33.1676 2.69 116.9 44 52.0 7.8823 0.326 33.1940 2.62 113.8 41 53.0 7.8345 0.305 33.2184 2.58 112.5 32 54.0 7.8166 0.270 33.2282 2.57 111.8 24 55.0 7.8087 0.257 33.2327 2.56 111.5 31 56.0 7.8068 0.244 33.2333 2.56 111.5 34 57.0 7.8055 0.234 33.2346 2.56 111.6 48 58.0 7.8057 0.237 33.2358 2.56 111.4 51 59.0 7.8036 0.246 33.2378 2.55 111.0 36 60.0 7.8000 0.246 33.2396 2.55 111.0 32 61.0 7.7981 0.261 33.2412 2.54 110.7 33 62.0 7.7969 0.253 33.2422 2.53 110.3 37 63.0 7.7896 0.252 33.2460 2.53 109.9 39 64.0 7.7864 0.254 33.2479 2.52 109.6 40 65.0 7.7749 0.222 33.2562 2.51 109.3 36 66.0 7.7599 0.228 33.2677 2.51 109.1 34 67.0 7.7578 0.249 33.2693 2.50 108.9 38 68.0 7.7558 0.199 33.2706 2.50 108.8 40 69.0 7.7516 0.201 33.2738 2.49 108.5 39 70.0 7.7439 0.196 33.2799 2.49 108.3 38 71.0 7.7308 0.229 33.2901 2.49 108.2 40 72.0 7.7192 0.218 33.2997 2.48 107.9 39 73.0 7.6977 0.209 33.3166 2.46 107.2 38 74.0 7.6708 0.196 33.3337 2.45 106.5 58 75.0 7.6603 0.180 33.3398 2.42 105.3 53 76.0 7.6468 0.193 33.3468 2.40 104.6 44 77.1 7.6365 0.173 33.3527 2.40 104.4 74 77.9 7.6316 0.189 33.3564 2.39 103.9 99 79.0 7.6150 0.163 33.3671 2.38 103.4 54 79.9 7.6106 0.163 33.3698 2.37 103.2 65