*2013/12/16 15:38:53.88 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/11 15:25:06.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 46 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : E5B4DAFA NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.99 49.928 2 Temperature:Secondary 'deg C (ITS90)' 9.052 9.7209 3 Fluorescence:URU:Wetlabs mg/m^3 0.793 1.658 4 Salinity:T1:C1 PSS-78 31.7804 32.143 5 Oxygen:Dissolved:SBE mL/L 3.673 5.002 6 Oxygen:Dissolved:SBE umol/kg 159.9935 217.9666 7 Number_of_bin_records n/a 26 106 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : VI 05 EVENT NUMBER : 19 LATITUDE : 49 3.39000 N ! (deg min) LONGITUDE : 126 6.12000 W ! (deg min) WATER DEPTH : 56 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:33:17 3921 3921 CLEAN 5.1 2013/03/30 16:40:40 3921 3921 SHIFTDAT 3.4 2013/04/02 09:21:25 3921 3921 SHIFTDAT 3.4 2013/04/02 11:03:01 3921 3921 SHIFTDAT 3.4 2013/04/02 11:09:13 3921 3921 SHIFTDAT 3.4 2013/04/02 13:33:15 3921 3921 DELETE 6.3 2013/04/02 13:44:56 3921 1744 CTDEDIT 4.61 2013/04/08 16:17:10 1744 1580 CALIB 11.7 2013/04/12 14:13:20 1580 1580 FILTERS 4.3 2013/04/12 14:24:33 1580 1580 BINAVE 4.1.1 2013/04/12 14:27:11 1580 46 REMOVECH 8.1.1 2013/04/12 14:56:36 46 46 CHGUNITS 3.0 2013/04/12 14:57:06 46 46 REORDER 1.3 2013/04/12 15:11:06 ? ? HDREDIT2 2.6 2013/04/12 15:13:39 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:53 46 46 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 40.27 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/08 16:17:10 164 records were deleted in this editing session. 76 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:36 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:39 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.019.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 11 2012 08:25:03 NMEA Latitude = 49 03.39 N NMEA Longitude = 126 06.12 W NMEA UTC (Time) = Oct 11 2012 15:25:06 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: VI 05 Depth(m): 56 System UTC = Oct 11 2012 07:25:03 # nquan = 15 # nvalues = 3921 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 3921 # span 1 = 2.729, 50.270 # span 2 = 9.0429, 9.7233 # span 3 = 9.0423, 9.7229 # span 4 = 3.446347, 3.468702 # span 5 = 3.446492, 3.468814 # span 6 = 1.6068, 2.0513 # span 7 = 0.3655, 9.7306 # span 8 = 7.832, 7.959 # span 9 = -1.548, 1.114 # span 10 = 0, 1 # span 11 = 31.7741, 32.1530 # span 12 = 31.7779, 32.1548 # span 13 = 3.61252, 4.97237 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 11 2012 15:25:06 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:04:22, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0019.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:09, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-001 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:53:57, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 19.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:44:38, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0019.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:11, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0019.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 9.7173 1.077 31.7805 4.99 217.4 39 6.0 9.7183 1.297 31.7805 5.00 217.7 33 7.0 9.7184 1.244 31.7804 5.00 217.9 36 8.0 9.7195 1.037 31.7806 5.00 218.0 40 9.0 9.7199 1.172 31.7809 5.00 217.7 36 10.0 9.7209 1.335 31.7808 4.92 214.2 41 11.0 9.7114 1.277 31.7813 4.82 209.9 33 12.0 9.6486 1.236 31.7885 4.80 209.4 30 13.0 9.6395 1.296 31.7900 4.80 209.2 31 14.0 9.6367 1.092 31.7901 4.79 208.6 32 15.0 9.6353 1.378 31.7902 4.78 208.5 31 16.0 9.6301 1.342 31.7906 4.78 208.3 30 17.0 9.6250 1.491 31.7917 4.78 208.2 31 18.0 9.6241 1.658 31.7918 4.76 207.6 31 19.0 9.6231 1.336 31.7922 4.75 206.9 32 20.0 9.6147 1.332 31.7934 4.74 206.4 35 21.0 9.6137 1.063 31.7937 4.70 204.8 33 22.0 9.6056 1.367 31.7950 4.65 202.6 27 23.0 9.5932 1.121 31.7977 4.59 199.9 30 24.0 9.5736 1.019 31.8011 4.53 197.3 30 25.0 9.5554 1.142 31.8048 4.45 193.7 31 26.0 9.5401 1.271 31.8082 4.41 192.2 31 27.0 9.4988 1.146 31.8182 4.49 195.6 33 28.0 9.4963 1.409 31.8461 4.51 196.6 30 29.0 9.5030 1.181 31.8647 4.50 196.2 27 30.0 9.4922 1.217 31.8765 4.48 195.1 30 31.0 9.4772 1.381 31.8866 4.43 193.2 38 32.0 9.4574 1.144 31.8957 4.40 191.7 33 33.0 9.4420 1.308 31.8998 4.36 190.0 27 34.0 9.4348 1.483 31.9029 4.32 188.3 27 35.0 9.4001 1.441 31.9264 4.30 187.2 33 36.0 9.3647 1.429 31.9498 4.29 186.7 31 37.0 9.3590 1.289 31.9612 4.27 185.9 26 38.0 9.3571 1.338 31.9647 4.24 184.5 27 39.0 9.3437 1.416 31.9716 4.18 182.2 35 40.0 9.3215 1.476 31.9845 4.09 178.4 37 41.0 9.2772 1.404 32.0070 4.04 175.9 27 42.0 9.2582 1.514 32.0133 3.99 174.0 30 43.0 9.2397 1.558 32.0215 3.95 172.1 32 44.0 9.2218 1.606 32.0297 3.90 170.0 31 45.0 9.2077 1.422 32.0311 3.88 169.2 29 46.0 9.1760 1.477 32.0496 3.85 167.8 32 47.0 9.1376 1.384 32.0936 3.80 165.4 32 48.0 9.1159 1.322 32.1040 3.73 162.3 37 49.1 9.0785 0.907 32.1175 3.69 160.6 56 49.9 9.0520 0.793 32.1430 3.67 160.0 106