*2013/12/16 15:38:53.73 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/10/10 19:58:03.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 79 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : F27F6794 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.305 83.062 2 Temperature:Secondary 'deg C (ITS90)' 7.6355 9.8023 3 Fluorescence:URU:Wetlabs mg/m^3 0.421 1.629 4 Salinity:T1:C1 PSS-78 31.7231 33.3622 5 Oxygen:Dissolved:SBE mL/L 2.248 5.076 6 Oxygen:Dissolved:SBE umol/kg 97.82444 221.193 7 Number_of_bin_records n/a 14 47 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-67\Pro $END *ADMINISTRATION MISSION : 2012-67 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Morris J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : BC Coast STATION : VI 01 EVENT NUMBER : 7 LATITUDE : 48 47.80000 N ! (deg min) LONGITUDE : 125 23.00000 W ! (deg min) WATER DEPTH : 91 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2013/03/30 16:33:11 4441 4441 CLEAN 5.1 2013/03/30 16:40:34 4441 4441 SHIFTDAT 3.4 2013/04/02 09:21:19 4441 4441 SHIFTDAT 3.4 2013/04/02 11:02:55 4441 4441 SHIFTDAT 3.4 2013/04/02 11:09:08 4441 4441 SHIFTDAT 3.4 2013/04/02 13:33:09 4441 4441 DELETE 6.3 2013/04/02 13:44:51 4441 2007 CTDEDIT 4.61 2013/04/08 15:52:08 2007 1941 CALIB 11.7 2013/04/12 14:13:17 1941 1941 FILTERS 4.3 2013/04/12 14:24:31 1941 1941 BINAVE 4.1.1 2013/04/12 14:27:09 1941 79 REMOVECH 8.1.1 2013/04/12 14:56:35 79 79 CHGUNITS 3.0 2013/04/12 14:57:06 79 79 REORDER 1.3 2013/04/12 15:11:06 ? ? HDREDIT2 2.6 2013/04/12 15:13:39 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:53 79 79 $END $REMARKS -CLEAN functions: 2013/03/30 16:40:30 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 6.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.80 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 73.67 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2013/04/08 15:52:08 66 records were deleted in this editing session. 11 changes in channel Salinity:T1:C1 -CALIB parameters: 2013/04/12 14:13:17 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2013/04/12 14:56:35 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2013/04/12 15:13:39 Applied edit header: P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-67\2012-67.007.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 10 2012 12:57:29 NMEA Latitude = 48 47.80 N NMEA Longitude = 125 23.00 W NMEA UTC (Time) = Oct 10 2012 19:58:03 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-67 Station: VI 01 Depth(m): 91 System UTC = Oct 10 2012 11:57:29 # nquan = 15 # nvalues = 4441 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 4441 # span 1 = 3.249, 83.668 # span 2 = 7.6333, 10.0105 # span 3 = 7.6336, 9.8345 # span 4 = 3.435596, 3.479331 # span 5 = 3.435485, 3.479445 # span 6 = 1.1536, 2.0867 # span 7 = 0.1751, 9.4608 # span 8 = 7.691, 7.969 # span 9 = -1.539, 1.386 # span 10 = 0, 1 # span 11 = 31.5647, 33.3645 # span 12 = 31.6834, 33.3659 # span 13 = 2.18315, 5.15349 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 10 2012 19:58:03 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0851 # 29-May-2012 # 4.5412 # 2.4967 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Mar 30 2013 14:04:19, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-67\RAW\CTD\2012-67-0007.hex P:\Crui se_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Mar 30 2013 14:15:07, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-67\Processing\convert\2012-67-000 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Mar 30 2013 14:53:55, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-67\Processing\wildedit\2012-67-00 07.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Mar 30 2013 15:44:36, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-67\Processing\align\2012-67-0007.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Mar 30 2013 15:48:09, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-67\Processing\celltm\2012-67-0007.c nv P:\Cruise_Data_Processing\2012-67\Processing\doc\2012-67-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------- Transmissivity and fluorescence are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved Oxygen data were recalibrated by adjusting the values of SOC and OFFSET in the configuration file, based on the results of cruise 2012-01, because there was no calibration sampling during this cruise. Since it is likely that some drift had occurred since February 2012, these data must be considered less reliable than usual. A further correction was based on cruise 2012-49 during which negative DO values were found in anoxic water. Salinity is considered +/-0.002 based primarily on a post-cruise calibration. A pH sensor was attached to the CTD, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see processing report: 2012-67-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T1:C1 : n: er_o ! Secondar URU: Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.3 9.7630 1.141 31.7239 5.06 220.6 14 6.0 9.7797 1.104 31.7231 5.04 219.4 34 7.0 9.7493 1.017 31.7455 5.01 218.5 31 8.0 9.7583 1.192 31.7693 5.03 219.1 30 9.0 9.7449 1.084 31.7754 5.08 221.2 27 10.0 9.7713 1.221 31.7608 5.08 221.2 24 11.0 9.8023 1.109 31.7330 5.04 219.7 25 12.0 9.7927 1.324 31.7463 4.99 217.4 26 13.0 9.7858 1.186 31.7616 4.96 216.3 25 14.0 9.7792 1.052 31.7985 4.97 216.4 28 15.0 9.7874 1.238 31.8045 4.97 216.4 30 16.0 9.7984 1.140 31.8118 4.96 216.1 24 17.0 9.7972 1.055 31.8142 4.94 215.3 25 18.0 9.7973 1.629 31.8176 4.92 214.2 24 19.0 9.7864 1.481 31.8181 4.90 213.3 22 20.0 9.7551 0.993 31.8160 4.88 212.7 22 21.0 9.7379 1.015 31.8251 4.85 211.2 24 22.0 9.7329 1.307 31.8382 4.80 209.3 24 23.0 9.7004 1.042 31.8462 4.75 206.9 24 24.0 9.6662 0.996 31.8703 4.68 203.8 26 25.0 9.6220 0.980 31.9048 4.61 200.7 28 26.0 9.5837 1.045 31.9276 4.55 198.2 25 27.0 9.5658 1.146 31.9367 4.49 195.5 25 28.0 9.5446 1.186 31.9552 4.40 191.8 24 29.0 9.5173 1.004 31.9734 4.33 188.5 22 30.0 9.4586 1.094 31.9988 4.27 186.2 23 31.0 9.4218 1.078 32.0156 4.22 183.7 23 32.0 9.3946 1.457 32.0288 4.17 181.9 21 33.0 9.3524 1.196 32.0499 4.14 180.3 23 34.0 9.3327 1.188 32.0586 4.09 178.3 22 35.0 9.3031 0.993 32.0720 4.05 176.5 22 36.0 9.2731 0.901 32.0865 4.01 174.6 24 37.0 9.2472 0.996 32.0989 3.97 173.1 22 38.0 9.2115 0.958 32.1264 3.95 172.2 26 39.0 9.1803 0.986 32.1452 3.93 171.1 30 40.0 9.1808 0.949 32.1443 3.86 168.0 27 41.0 9.1690 0.987 32.1519 3.75 163.4 22 42.0 9.1367 0.958 32.1685 3.69 160.5 21 43.0 9.1076 1.023 32.1760 3.66 159.3 23 44.0 9.0622 0.913 32.1948 3.61 157.3 24 45.0 9.0590 0.947 32.2106 3.59 156.4 23 46.0 9.0239 0.923 32.2211 3.60 156.6 21 47.0 8.9996 0.789 32.2481 3.58 156.0 20 48.0 8.9947 0.957 32.2554 3.51 152.9 22 49.0 8.9790 0.849 32.2780 3.42 148.7 25 50.0 8.9017 1.076 32.3240 3.30 143.8 26 51.0 8.8479 0.936 32.3639 3.11 135.5 25 52.0 8.7556 0.947 32.4360 2.86 124.4 24 53.0 8.6340 0.888 32.5180 2.66 115.8 22 54.0 8.4291 0.664 32.6539 2.55 111.2 20 55.0 8.3008 0.553 32.7337 2.50 108.8 21 56.0 8.2656 0.486 32.7501 2.47 107.4 20 57.0 8.2177 0.485 32.7934 2.45 106.7 24 58.0 8.1732 0.527 32.8307 2.44 106.3 26 59.0 8.1607 0.598 32.8423 2.44 106.2 29 60.0 8.1567 0.439 32.8475 2.47 107.6 26 61.0 8.1523 0.421 32.8530 2.57 111.9 23 62.0 8.1565 0.482 32.8636 2.71 118.1 22 63.0 8.1642 0.550 32.8743 2.79 121.7 22 64.0 8.1770 0.601 32.9238 2.78 121.1 24 65.0 8.1801 0.700 32.9483 2.70 117.7 23 66.0 8.1417 0.730 32.9824 2.66 115.6 22 67.0 8.0541 0.672 33.0341 2.67 116.0 20 68.0 7.9841 0.623 33.0863 2.67 116.1 21 69.0 7.9866 0.508 33.0977 2.63 114.5 22 70.0 7.9842 0.526 33.1191 2.58 112.1 24 71.0 7.9402 0.455 33.1442 2.49 108.5 27 72.0 7.8920 0.442 33.1730 2.36 102.5 27 73.0 7.8467 0.455 33.2003 2.26 98.5 26 74.0 7.8021 0.676 33.2012 2.25 97.8 23 75.0 7.7647 0.932 33.2250 2.25 98.0 24 76.0 7.7352 0.897 33.2553 2.28 99.1 26 77.0 7.7141 0.706 33.2767 2.32 100.8 26 78.0 7.6860 0.660 33.3091 2.34 102.0 25 79.0 7.6602 0.556 33.3374 2.35 102.2 23 80.0 7.6555 0.618 33.3437 2.35 102.1 24 81.0 7.6560 0.528 33.3477 2.35 102.0 20 82.0 7.6437 0.481 33.3568 2.35 102.1 28 83.1 7.6355 0.467 33.3622 2.35 102.2 47