*2013/12/16 15:38:36.00 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/11 14:47:07.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 107 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9890C6FF NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.178 110.808 2 Temperature:Primary 'deg C (ITS90)' 6.7497 13.3212 3 Fluorescence:URU:Wetlabs mg/m^3 0.68E-01 7.317 4 Salinity:T0:C0 PSS-78 32.1008 33.7491 5 Oxygen:Dissolved:SBE mL/L 1.433 6.977 6 Oxygen:Dissolved:SBE umol/kg 62.32367 304.1477 7 Number_of_bin_records n/a 13 75 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-54\Pro $END *ADMINISTRATION MISSION : 2012-54 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Conservation Biology Herring Trawl Survey SCIENTIST : Boldt J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 8 EVENT NUMBER : 15 LATITUDE : 48 26.37000 N ! (deg min) LONGITUDE : 125 37.56000 W ! (deg min) WATER DEPTH : 117 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/03 14:49:20 8209 8209 CLEAN 5.0.4 2012/11/03 14:49:50 8209 8209 SHIFTDAT 3.4 2012/11/03 15:19:43 8209 8209 SHIFTDAT 3.4 2012/11/03 15:30:38 8209 8209 SHIFTDAT 3.4 2012/11/03 15:31:01 8209 8209 SHIFTDAT 3.4 2012/11/03 15:31:24 8209 8209 DELETE 6.3 2012/11/03 15:36:35 8209 3107 CTDEDIT 4.61 2012/11/03 17:01:59 3107 3092 CALIB 11.7 2012/11/05 07:59:12 3092 3092 FILTERS 4.3 2012/11/05 07:59:25 3092 3092 BINAVE 4.1.1 2012/11/05 07:59:32 3092 107 REMOVECH 8.1.1 2012/11/05 08:08:34 107 107 CHGUNITS 3.0 2012/11/05 08:09:21 107 107 REORDER 1.3 2012/11/05 08:09:49 ? ? HDREDIT2 2.5.1 2012/11/05 08:11:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:36 107 107 $END $REMARKS -CLEAN functions: 2012/11/03 14:49:35 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 101.12 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/03 17:01:59 15 records were deleted in this editing session. 27 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 07:59:12 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 08:08:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 08:11:24 Applied edit header: P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012- Herring August Trawl\2012-54-015.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 11 2012 14:51:04 NMEA Latitude = 48 26.37 N NMEA Longitude = 125 37.56 W NMEA UTC (Time) = Aug 11 2012 14:47:07 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 8 Depth(m): 117 System UTC = Aug 11 2012 13:51:04 # nquan = 15 # nvalues = 8209 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8209 # span 1 = 4.057, 111.125 # span 2 = 6.7377, 13.3482 # span 3 = 6.7369, 13.3481 # span 4 = 3.396819, 3.823787 # span 5 = 3.396910, 3.824022 # span 6 = -0.0313, 16.8893 # span 7 = 0.8840, 2.8352 # span 8 = 8.312, 8.946 # span 9 = -1.403, 1.641 # span 10 = 0, 1 # span 11 = 32.0663, 33.7558 # span 12 = 32.0421, 33.7575 # span 13 = 1.35048, 6.93416 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 11 2012 14:47:07 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 03 2012 14:13:00, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-54\RAW\CTD\2012-54-0015.hex P:\Crui se_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 03 2012 14:14:12, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-54\Processing\convert\2012-54-001 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 03 2012 14:34:18, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-54\Processing\wildedit\2012-54-00 15.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 03 2012 14:39:22, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-54\Processing\align\2012-54-0015.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 03 2012 14:40:39, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-54\Processing\celltm\2012-54-0015.c nv P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-54-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.2 13.3204 6.669 32.1010 6.97 303.6 24 6.0 13.3202 6.865 32.1008 6.97 303.8 49 7.0 13.3209 7.306 32.1010 6.98 304.1 38 8.0 13.3212 7.317 32.1012 6.97 304.0 34 9.0 13.3208 7.082 32.1012 6.69 291.5 41 10.0 13.3200 6.786 32.1014 5.91 257.5 27 11.0 13.2714 6.044 32.1046 5.47 238.5 23 12.0 11.9926 4.033 32.1796 5.42 236.0 29 13.0 10.9387 2.772 32.2392 5.38 234.4 44 14.0 10.8385 2.663 32.2328 5.24 228.3 26 15.0 10.7185 2.577 32.2402 5.18 225.6 22 16.0 10.5354 2.492 32.2535 5.14 224.0 24 17.0 10.4602 2.339 32.2616 5.06 220.3 32 18.0 10.3984 2.114 32.2679 4.94 215.1 35 19.0 10.2652 1.846 32.2833 4.77 207.8 27 20.0 10.1800 1.804 32.2955 4.62 201.1 22 21.0 10.0799 1.713 32.3083 4.54 197.9 21 22.0 9.8084 1.387 32.3563 4.53 197.1 21 23.1 9.6332 1.308 32.4041 4.47 194.6 43 23.9 9.6175 1.305 32.4154 4.14 180.3 34 25.0 9.6107 1.284 32.4233 3.85 167.8 17 26.0 9.4959 1.217 32.4636 3.74 162.8 13 27.0 9.0665 1.203 32.6047 3.65 159.1 19 28.0 8.8022 1.148 32.6853 3.51 153.0 31 29.0 8.5689 0.954 32.7613 3.30 143.7 37 30.0 8.4104 0.775 32.7916 3.18 138.5 29 31.0 8.2073 0.565 32.8035 3.17 138.1 26 32.0 8.1327 0.488 32.8159 3.15 137.0 20 33.0 8.1610 0.530 32.8306 3.10 135.1 18 34.0 8.2618 0.604 32.8848 3.06 133.2 24 35.0 8.1473 0.582 32.9498 3.00 130.7 50 35.9 8.1071 0.553 32.9716 2.92 127.1 25 37.0 8.0685 0.517 33.0008 2.87 124.9 18 38.0 8.0145 0.500 33.0235 2.83 123.3 18 39.0 7.9424 0.466 33.0601 2.81 122.3 22 40.0 7.8724 0.481 33.0957 2.80 122.0 28 41.0 7.8187 0.403 33.1214 2.81 122.2 26 42.0 7.7449 0.314 33.1367 2.81 122.4 25 43.0 7.7099 0.311 33.1445 2.82 122.7 33 44.0 7.6986 0.302 33.1467 2.82 122.6 35 45.0 7.6968 0.298 33.1477 2.82 122.5 24 46.0 7.6927 0.262 33.1499 2.81 122.4 20 47.0 7.6917 0.308 33.1516 2.81 122.2 24 48.0 7.6901 0.302 33.1528 2.79 121.5 29 49.0 7.6893 0.299 33.1547 2.77 120.5 28 50.0 7.6795 0.325 33.1616 2.75 119.8 26 51.0 7.6635 0.308 33.1677 2.73 118.6 30 52.0 7.6305 0.278 33.1837 2.70 117.7 29 53.0 7.5579 0.225 33.2233 2.68 116.8 23 54.0 7.5098 0.185 33.2544 2.67 116.1 21 55.0 7.4887 0.214 33.2889 2.65 115.2 30 56.0 7.4737 0.203 33.3104 2.62 113.9 38 57.0 7.4519 0.212 33.3343 2.60 113.0 28 58.0 7.4292 0.191 33.3571 2.59 112.6 23 59.0 7.4242 0.195 33.3611 2.57 111.9 21 60.0 7.4204 0.181 33.3636 2.55 111.0 19 61.0 7.4115 0.200 33.3681 2.53 110.1 24 62.0 7.3823 0.176 33.3838 2.52 109.7 27 63.0 7.3687 0.155 33.3918 2.51 109.2 32 64.0 7.3595 0.200 33.3976 2.49 108.5 33 65.0 7.3544 0.187 33.4012 2.48 107.8 24 66.0 7.3520 0.158 33.4032 2.46 106.9 22 67.0 7.3303 0.148 33.4168 2.43 105.8 27 68.0 7.3090 0.177 33.4296 2.39 104.0 29 69.0 7.2845 0.172 33.4454 2.36 102.6 25 70.0 7.2571 0.155 33.4624 2.33 101.5 22 71.0 7.2232 0.146 33.4809 2.32 100.8 23 72.0 7.1965 0.126 33.4939 2.29 99.6 33 73.0 7.1752 0.165 33.5054 2.26 98.4 32 74.0 7.1600 0.124 33.5202 2.24 97.5 21 75.0 7.1560 0.121 33.5254 2.23 96.9 21 76.0 7.1438 0.115 33.5345 2.21 96.4 26 77.0 7.1271 0.131 33.5448 2.21 96.0 36 78.0 7.1184 0.116 33.5497 2.20 95.7 28 79.0 7.1150 0.129 33.5523 2.20 95.5 24 80.0 7.1119 0.130 33.5541 2.19 95.2 24 81.0 7.1062 0.122 33.5571 2.18 95.0 24 82.0 7.1037 0.101 33.5590 2.17 94.3 23 83.0 7.1011 0.112 33.5607 2.15 93.5 24 84.0 7.0757 0.118 33.5759 2.13 92.8 36 85.0 7.0585 0.112 33.5854 2.12 92.0 30 86.0 7.0506 0.110 33.5897 2.10 91.5 24 87.0 7.0401 0.106 33.5957 2.09 91.0 26 88.0 7.0340 0.123 33.5991 2.07 90.0 30 89.0 7.0185 0.127 33.6080 2.03 88.3 31 90.0 7.0015 0.118 33.6174 1.99 86.6 27 91.0 6.9730 0.100 33.6326 1.96 85.3 23 92.0 6.9562 0.096 33.6416 1.93 83.9 23 93.0 6.9409 0.106 33.6491 1.89 82.1 33 94.0 6.9085 0.093 33.6649 1.82 79.0 38 95.0 6.8730 0.079 33.6825 1.77 76.8 25 96.0 6.8521 0.082 33.6936 1.73 75.4 21 97.0 6.8419 0.079 33.6990 1.71 74.5 20 98.0 6.8317 0.085 33.7037 1.70 73.7 25 99.0 6.8196 0.088 33.7098 1.67 72.9 42 100.0 6.8141 0.089 33.7126 1.65 71.9 34 101.0 6.8120 0.096 33.7140 1.63 70.9 22 102.0 6.8110 0.075 33.7149 1.61 70.2 21 103.0 6.8049 0.071 33.7184 1.60 69.4 17 104.1 6.7932 0.086 33.7247 1.55 67.5 41 104.9 6.7853 0.084 33.7291 1.51 65.8 40 106.0 6.7713 0.068 33.7368 1.50 65.2 29 107.1 6.7698 0.075 33.7377 1.49 64.8 39 107.9 6.7658 0.084 33.7399 1.48 64.3 50 109.0 6.7610 0.068 33.7426 1.47 63.8 35 110.2 6.7566 0.087 33.7453 1.46 63.5 75 110.8 6.7497 0.090 33.7491 1.43 62.3 70